| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is flgL [H]
Identifier: 21242720
GI number: 21242720
Start: 2307332
End: 2308537
Strand: Reverse
Name: flgL [H]
Synonym: XAC1976
Alternate gene names: 21242720
Gene position: 2308537-2307332 (Counterclockwise)
Preceding gene: 21242721
Following gene: 21242719
Centisome position: 44.6
GC content: 64.1
Gene sequence:
>1206_bases ATGACCGACCGTATCTCCACCAGCATGATGTACAGCCAGTCGGTCGCCTCGATGGGCGCCAAGCAGTCGCGGCTGAACCA GCTCGAATCGCAGCTCTCCAGTGGGCAGCGCCTGGTCACCGCCAAGGACGACCCGGTGGCTGCAGGCACGGCGGTCGGCC TGGACCGCGCCCTGGCGGCGATCACGCGCTTCGGCGAAAACGCCAACAACGTGCAGAACCGGCTTGGGCTGCAGGAAAAC GCGCTTTCGCAAGCCGGCGACAAAATGGCGCGCGTCACCGAATTGGCGGTGCAGGCCAGCAATTCTTCGCTCAGCCCCGA CGATCGCAAGGCGATCGCCTCGGAACTGACTGCGCTGCGCGAGAGCATGGTGAGCCTGGCCAACAGCACCGACGGCACCG GGCGCTACCTGTTCGGCGGCACCGCCGATGGCAGTGCGCCTTTCATCAAGAGCAATGGCAGCGTCACCTACAACGGCGAC CAGACCCAGAAGCAGGTCGAAGTGGCGCCGGACACCTTCGTCAGCGACACCCTGCCCGGCAGCGAAATCTTCATGCGCAT CCGCACCGGCGACGGCACCGTGGATGCGCACGCCAACGCCGCCAACACGGGGACCGGCTTGCTGCTGGATTTCAGCCGCG ATGCCAGCACCGGCAGCTGGAACGGCGGAAGTTACAGCGTGCAGTTCACCGCCGCCGACACCTATGAAGTGCGCGACAGC ACCAATACGGTGGTCGGCACCGGCACGTACAAAGAGGGCGAAGACATCAACGCCGCCGGCGTGCGCATGCGCATCAGCGG CGCACCGGCGGTGGGCGACAGTTTCCAGATTGGCGCCTCCGGTACCAAGGATGTGTTCTCCACCATCGACGACCTGGTCG GCGCGCTCAATTCCGACACGCTGACCGCGCCGCAGAAGGCAGCGATGATCAACACGCTGCAGTCGTCGATGCGCGACATC ACGCAGGCGTCCTCGAAGATGATCGATGCGCGCGCCTCCGGCGGCGCTCAGTTGTCGGCCATCGACAATGCCAACTCATT GCTCGAATCCAACGAAGTCACCCTCAAGACCAGCCTGTCGTCGATCCGCGACCTGGATTACGCCTCGGCGATCGGGCAGT ACCAACTGGAGAAGGCCTCGTTGCAGGCCGCTCAAACGATTCTTCAGCAGATGCAGTCGTCGTCGTTGTTCAACATCATC CGCTGA
Upstream 100 bases:
>100_bases CCGCCAACATGCTGAAACTGCAGCAGGCCTATCAGGCCGCCGCACAGATGATCTCTACCGCCGACACCATCTTCCAAGCC ATCCTGGGTGCCGTACGCTG
Downstream 100 bases:
>100_bases TTTTGCCGCAGAAAACTTGGGCTTTCTTCGCTCCTGCGGGTGCGCACTTGCGCAGGCGGACGGAGTTTATTTTTCGAAGA GTTATACCAACGCTAAAGAT
Product: flagellar hook-associated protein FlgL
Products: NA
Alternate protein names: HAP3; Hook-filament junction protein [H]
Number of amino acids: Translated: 401; Mature: 400
Protein sequence:
>401_residues MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQEN ALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGD QTQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDTLTAPQKAAMINTLQSSMRDI TQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLSSIRDLDYASAIGQYQLEKASLQAAQTILQQMQSSSLFNII R
Sequences:
>Translated_401_residues MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQEN ALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGD QTQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDTLTAPQKAAMINTLQSSMRDI TQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLSSIRDLDYASAIGQYQLEKASLQAAQTILQQMQSSSLFNII R >Mature_400_residues TDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAAITRFGENANNVQNRLGLQENA LSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALRESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQ TQKQVEVAPDTFVSDTLPGSEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDST NTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDTLTAPQKAAMINTLQSSMRDIT QASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLSSIRDLDYASAIGQYQLEKASLQAAQTILQQMQSSSLFNIIR
Specific function: Unknown
COG id: COG1344
COG function: function code N; Flagellin and related hook-associated proteins
Gene ontology:
Cell location: Secreted. Bacterial flagellum [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial flagellin family [H]
Homologues:
Organism=Escherichia coli, GI1787324, Length=207, Percent_Identity=32.8502415458937, Blast_Score=112, Evalue=3e-26,
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013384 - InterPro: IPR001029 [H]
Pfam domain/function: PF00669 Flagellin_N [H]
EC number: NA
Molecular weight: Translated: 42059; Mature: 41928
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALR HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPG HHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCCCEEEECCCHHHHCCCCC SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS HHEEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCC TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDT CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCC LTAPQKAAMINTLQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCEEEEEHHH SIRDLDYASAIGQYQLEKASLQAAQTILQQMQSSSLFNIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TDRISTSMMYSQSVASMGAKQSRLNQLESQLSSGQRLVTAKDDPVAAGTAVGLDRALAA CCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHH ITRFGENANNVQNRLGLQENALSQAGDKMARVTELAVQASNSSLSPDDRKAIASELTALR HHHHCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH ESMVSLANSTDGTGRYLFGGTADGSAPFIKSNGSVTYNGDQTQKQVEVAPDTFVSDTLPG HHHHHHHCCCCCCCEEEECCCCCCCCCEEECCCCEEECCCCCCCEEEECCCHHHHCCCCC SEIFMRIRTGDGTVDAHANAANTGTGLLLDFSRDASTGSWNGGSYSVQFTAADTYEVRDS HHEEEEEECCCCCEECCCCCCCCCCEEEEEECCCCCCCCCCCCEEEEEEEECCCEEECCC TNTVVGTGTYKEGEDINAAGVRMRISGAPAVGDSFQIGASGTKDVFSTIDDLVGALNSDT CCEEEECCCCCCCCCCCCCCEEEEECCCCCCCCCEEECCCCHHHHHHHHHHHHHHCCCCC LTAPQKAAMINTLQSSMRDITQASSKMIDARASGGAQLSAIDNANSLLESNEVTLKTSLS CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHCCCEEEEEHHH SIRDLDYASAIGQYQLEKASLQAAQTILQQMQSSSLFNIIR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8158647; 8905232; 9278503; 1447789 [H]