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The map label for this gene is yeaW [H]

Identifier: 21242704

GI number: 21242704

Start: 2292739

End: 2293884

Strand: Reverse

Name: yeaW [H]

Synonym: XAC1960

Alternate gene names: 21242704

Gene position: 2293884-2292739 (Counterclockwise)

Preceding gene: 21242705

Following gene: 21242703

Centisome position: 44.32

GC content: 58.64

Gene sequence:

>1146_bases
ATGCGATCGCGAATGCACCCCGGCTACTACCTGTCCACGGACATCTTCGCCCGCGAACAGCGCAAGATCTTCCGCAAGGT
ATGGCTGTTCGCCGGCCTCAAGACGCTGCTGCCCGATAACAACTGCTTCATCACCCGCAGCCTTGCCGGCATTCCGGTAC
TGATCCAGAACTTCCAGGGTCGCCTGCGCGCGTTCGAGAACGTCTGCCTGCACCGCAGCGCACTGCTCCAGACAGCGCCG
GTGGGAAAGCGGTCGCTGGTCTGCCCTTACCATGCATGGAAGTACGATGCCGACGGTCGGGTCGAGAACATCCCCGAATG
CGATGCCGTTTATGGCTTCGGCGAGGAGGAAAGACGCGGCCTCCAACTGCGGGAGTTCGCCTTGCATGAGGTGGGAAACC
TGGTGTTCGTCAACCTCGATCCCGACCCGATGCCGATTCAGGATCAGTTTTCGCCTGACTTCATCGCCTTGCTCGAAAGT
AGTTCCAACGCCTATGACACCGAGGTCATGGTGACTACCTGGCATGGCCGGTACAACTGGAAGCTGGCCTACGAGAATCT
GCGGGACGCGAACCACCCGCGCTTTGTCCACCCCAAGACCCTGGCCAAGAACGTCAGCTTCGTTCCCCAAGTAGACGAGG
AACAAGCCAAGGAGTCCATGAAAGCTTTGCAAGACAGCTCACCCGCTGCCTTGAGGCACGAGATGCGCCGCTTCAGTTTC
GGCGGCCCGGAAGCACCCATTCCCAACCTTCAACACTTCGGCTGGCACGATAAAGTGGAACGCTGGGGCGAGCAGAATGC
CTACTTCAACTGGTTGGCCTTTCCGAACATGCATATCGCCAGTTCCAACGGCGGCTATTCCTTCACGCTGGAACACCACA
TCCCCGTCGCGCCGGACCGCACCGACCTTGAAATTTATTGGTTTAGCGCACGGAAGAAACAGCCTTATGTTTCTTCCAAC
CAAGTGCTACTGGCACAGATGCACGGCAGCAGGGTGGTAGTGGGCGAAGACGTTGACATCATGGAGCGGGTGCAGGCGGC
CTTGCACACAGACGCGCCCCTGCCAACCCAGGGTGCCTACGAATCCATGAATCGACTGGTCGAACGCTGGTACACGCTGC
TGATGGAGACCGAACATGAAATCTAG

Upstream 100 bases:

>100_bases
TGCCGGTTCGGTCGTGGTCAAGGACGTGCCGGCCGGTGCCAGCGTATTCGGTAACCCTGCGCGGGTCATTTACCACAAGG
ATTCCTGAGGAAGCCCGCCA

Downstream 100 bases:

>100_bases
GTGGATCATCGGCCGCAGCGAATACCTCGACCTGGCCTTTCACGCCTGGAAGCAGGCGCGTCAGGACGAGACGGTCATCA
GGATCGAGGTGCCACAAGAC

Product: ring hydroxylating dioxygenase alpha-subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MRSRMHPGYYLSTDIFAREQRKIFRKVWLFAGLKTLLPDNNCFITRSLAGIPVLIQNFQGRLRAFENVCLHRSALLQTAP
VGKRSLVCPYHAWKYDADGRVENIPECDAVYGFGEEERRGLQLREFALHEVGNLVFVNLDPDPMPIQDQFSPDFIALLES
SSNAYDTEVMVTTWHGRYNWKLAYENLRDANHPRFVHPKTLAKNVSFVPQVDEEQAKESMKALQDSSPAALRHEMRRFSF
GGPEAPIPNLQHFGWHDKVERWGEQNAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDRTDLEIYWFSARKKQPYVSSN
QVLLAQMHGSRVVVGEDVDIMERVQAALHTDAPLPTQGAYESMNRLVERWYTLLMETEHEI

Sequences:

>Translated_381_residues
MRSRMHPGYYLSTDIFAREQRKIFRKVWLFAGLKTLLPDNNCFITRSLAGIPVLIQNFQGRLRAFENVCLHRSALLQTAP
VGKRSLVCPYHAWKYDADGRVENIPECDAVYGFGEEERRGLQLREFALHEVGNLVFVNLDPDPMPIQDQFSPDFIALLES
SSNAYDTEVMVTTWHGRYNWKLAYENLRDANHPRFVHPKTLAKNVSFVPQVDEEQAKESMKALQDSSPAALRHEMRRFSF
GGPEAPIPNLQHFGWHDKVERWGEQNAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDRTDLEIYWFSARKKQPYVSSN
QVLLAQMHGSRVVVGEDVDIMERVQAALHTDAPLPTQGAYESMNRLVERWYTLLMETEHEI
>Mature_381_residues
MRSRMHPGYYLSTDIFAREQRKIFRKVWLFAGLKTLLPDNNCFITRSLAGIPVLIQNFQGRLRAFENVCLHRSALLQTAP
VGKRSLVCPYHAWKYDADGRVENIPECDAVYGFGEEERRGLQLREFALHEVGNLVFVNLDPDPMPIQDQFSPDFIALLES
SSNAYDTEVMVTTWHGRYNWKLAYENLRDANHPRFVHPKTLAKNVSFVPQVDEEQAKESMKALQDSSPAALRHEMRRFSF
GGPEAPIPNLQHFGWHDKVERWGEQNAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDRTDLEIYWFSARKKQPYVSSN
QVLLAQMHGSRVVVGEDVDIMERVQAALHTDAPLPTQGAYESMNRLVERWYTLLMETEHEI

Specific function: Unknown

COG id: COG4638

COG function: function code PR; Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1788103, Length=193, Percent_Identity=29.5336787564767, Blast_Score=96, Evalue=5e-21,
Organism=Escherichia coli, GI1788888, Length=211, Percent_Identity=25.5924170616114, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017941
- InterPro:   IPR015881
- InterPro:   IPR001663 [H]

Pfam domain/function: PF00355 Rieske [H]

EC number: 1.14.1.- [C]

Molecular weight: Translated: 43964; Mature: 43964

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRMHPGYYLSTDIFAREQRKIFRKVWLFAGLKTLLPDNNCFITRSLAGIPVLIQNFQG
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
RLRAFENVCLHRSALLQTAPVGKRSLVCPYHAWKYDADGRVENIPECDAVYGFGEEERRG
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCCCCCCCHHHCCCCHHHHCC
LQLREFALHEVGNLVFVNLDPDPMPIQDQFSPDFIALLESSSNAYDTEVMVTTWHGRYNW
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEE
KLAYENLRDANHPRFVHPKTLAKNVSFVPQVDEEQAKESMKALQDSSPAALRHEMRRFSF
EEEECHHCCCCCCCEECHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GGPEAPIPNLQHFGWHDKVERWGEQNAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDR
CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCCCCC
TDLEIYWFSARKKQPYVSSNQVLLAQMHGSRVVVGEDVDIMERVQAALHTDAPLPTQGAY
CCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHH
ESMNRLVERWYTLLMETEHEI
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRSRMHPGYYLSTDIFAREQRKIFRKVWLFAGLKTLLPDNNCFITRSLAGIPVLIQNFQG
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHH
RLRAFENVCLHRSALLQTAPVGKRSLVCPYHAWKYDADGRVENIPECDAVYGFGEEERRG
HHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEECCCCCCCCCCCCHHHCCCCHHHHCC
LQLREFALHEVGNLVFVNLDPDPMPIQDQFSPDFIALLESSSNAYDTEVMVTTWHGRYNW
CHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEEEECCEEEE
KLAYENLRDANHPRFVHPKTLAKNVSFVPQVDEEQAKESMKALQDSSPAALRHEMRRFSF
EEEECHHCCCCCCCEECHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCC
GGPEAPIPNLQHFGWHDKVERWGEQNAYFNWLAFPNMHIASSNGGYSFTLEHHIPVAPDR
CCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCEEEEECCCCEEEEEECCCCCCCCC
TDLEIYWFSARKKQPYVSSNQVLLAQMHGSRVVVGEDVDIMERVQAALHTDAPLPTQGAY
CCEEEEEEECCCCCCCCCCCCEEEEEECCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHH
ESMNRLVERWYTLLMETEHEI
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]