| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242702
Identifier: 21242702
GI number: 21242702
Start: 2290606
End: 2291751
Strand: Reverse
Name: 21242702
Synonym: XAC1958
Alternate gene names: NA
Gene position: 2291751-2290606 (Counterclockwise)
Preceding gene: 21242703
Following gene: 21242701
Centisome position: 44.28
GC content: 57.68
Gene sequence:
>1146_bases TTGAGCGTTGCGCCTTCCGTGGATCCGCCGATCCCAGGTTTCGAACAGCGCCCCCTGTTTCTGCTTCAGCCGCGCTCGGG CCTTGGCAACATTTATGGCCCACAGATTGTCCAGCGCTCCAGTCATGTCATTGCCGCCATTGATGACGAGCCAAGCGACA GCGATACCGTTCATGGGGTGCCGCGTTGGAGTTCGCGCCAGTTCATCGAACAAGCGGCCCAGCATTCCCAGGCATTGGCC ATCGATTTTTCTTACAGCCCCGGAGAGTCGGGCTTGGCCCGCAAGCTCTGCGAACAAGCAGGCATTGAAAGGGTCGGTGC CTGCCTTGCCGTTGCGCACTGCGGGCTTCCCGCCGTATACGAGCCTGCCCAGGTATACCGTCAGCGGACGCTTCTGCGCC TGGACGAATTTCTGCGTATTGCGGATCGACTGGACGACGATCTCAGCGTTTTTACGCTCTACAGCAACCTGTTGTTCCGC CTGACTTACGATTCCAGCTTGCTGCTGGACTGCTGGGCGACGCCGATCAACGAGTACTTTTCAGAATACGCAGACACCAG CACGTTCCAGCTTGGCCAGCGTGAACATTTCTGCGATGGCGGTGCCTTCCAGGGACCCATCGTGCACAAGTTTCTCGAGG CATCCCGCCACTGCTACGAAAGCATCACCGCCTTTGAACCCGATCGCATCAACTTTCAGAAATTGGAGAGCATTGCGAGC GCCCTCCCCCTTCCTCCACACAATTTCAAGGCACTAAAAAAAGCCATCTCCAACGAACAGACAACGCTGCGCTTCGAGGA GACAGGCACCGTCTCCAGCCATGTATCGCCGGATGGCGGAATCTCCGTGGCGACCACACGCCTGGACGACGAATTGGAAA AGCTGACGCTGCTGAAGTTGGACATCGAAGGATTTGAAGCCAGGGCACTGGAAGGCGCATCTCACCTCATCCGTACCCAG CTCCCCCGCATGGCTATTTGTGTCTACCACTACGCCCAGGATTTATTGGATATCGTGGAACAACTGGATAAATTGGTGGA GGGCTATCATTTCCGCCTACGCCAGCACTCTCCCGGCCACTACTACGATCTCGTGTTGTATGCATCCCCCGTCGCCGGTG CCGCACCGCCGCCTTGGGCGGAGTAG
Upstream 100 bases:
>100_bases GGCAGGCCAGTATGCCGATGCAATCGCTATCGATTTCTCTTGCAGTCCGCGCGGACGGGCGTTTGCAAATGACCTGTGCG CAAGCGCGGACATTGAGCAA
Downstream 100 bases:
>100_bases GTCCTGGAGAATTCACTACCAGGAAGATAAGGCAATGGTGGAAGGCGCCAAATCGCCTCCACGCCATGATGTAGACCGCT ACTGCGTGTCCGGATATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MSVAPSVDPPIPGFEQRPLFLLQPRSGLGNIYGPQIVQRSSHVIAAIDDEPSDSDTVHGVPRWSSRQFIEQAAQHSQALA IDFSYSPGESGLARKLCEQAGIERVGACLAVAHCGLPAVYEPAQVYRQRTLLRLDEFLRIADRLDDDLSVFTLYSNLLFR LTYDSSLLLDCWATPINEYFSEYADTSTFQLGQREHFCDGGAFQGPIVHKFLEASRHCYESITAFEPDRINFQKLESIAS ALPLPPHNFKALKKAISNEQTTLRFEETGTVSSHVSPDGGISVATTRLDDELEKLTLLKLDIEGFEARALEGASHLIRTQ LPRMAICVYHYAQDLLDIVEQLDKLVEGYHFRLRQHSPGHYYDLVLYASPVAGAAPPPWAE
Sequences:
>Translated_381_residues MSVAPSVDPPIPGFEQRPLFLLQPRSGLGNIYGPQIVQRSSHVIAAIDDEPSDSDTVHGVPRWSSRQFIEQAAQHSQALA IDFSYSPGESGLARKLCEQAGIERVGACLAVAHCGLPAVYEPAQVYRQRTLLRLDEFLRIADRLDDDLSVFTLYSNLLFR LTYDSSLLLDCWATPINEYFSEYADTSTFQLGQREHFCDGGAFQGPIVHKFLEASRHCYESITAFEPDRINFQKLESIAS ALPLPPHNFKALKKAISNEQTTLRFEETGTVSSHVSPDGGISVATTRLDDELEKLTLLKLDIEGFEARALEGASHLIRTQ LPRMAICVYHYAQDLLDIVEQLDKLVEGYHFRLRQHSPGHYYDLVLYASPVAGAAPPPWAE >Mature_380_residues SVAPSVDPPIPGFEQRPLFLLQPRSGLGNIYGPQIVQRSSHVIAAIDDEPSDSDTVHGVPRWSSRQFIEQAAQHSQALAI DFSYSPGESGLARKLCEQAGIERVGACLAVAHCGLPAVYEPAQVYRQRTLLRLDEFLRIADRLDDDLSVFTLYSNLLFRL TYDSSLLLDCWATPINEYFSEYADTSTFQLGQREHFCDGGAFQGPIVHKFLEASRHCYESITAFEPDRINFQKLESIASA LPLPPHNFKALKKAISNEQTTLRFEETGTVSSHVSPDGGISVATTRLDDELEKLTLLKLDIEGFEARALEGASHLIRTQL PRMAICVYHYAQDLLDIVEQLDKLVEGYHFRLRQHSPGHYYDLVLYASPVAGAAPPPWAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42516; Mature: 42385
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVAPSVDPPIPGFEQRPLFLLQPRSGLGNIYGPQIVQRSSHVIAAIDDEPSDSDTVHGV CCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCC PRWSSRQFIEQAAQHSQALAIDFSYSPGESGLARKLCEQAGIERVGACLAVAHCGLPAVY CCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC EPAQVYRQRTLLRLDEFLRIADRLDDDLSVFTLYSNLLFRLTYDSSLLLDCWATPINEYF CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH SEYADTSTFQLGQREHFCDGGAFQGPIVHKFLEASRHCYESITAFEPDRINFQKLESIAS HHHCCCCHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ALPLPPHNFKALKKAISNEQTTLRFEETGTVSSHVSPDGGISVATTRLDDELEKLTLLKL HCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHEEEEEE DIEGFEARALEGASHLIRTQLPRMAICVYHYAQDLLDIVEQLDKLVEGYHFRLRQHSPGH ECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC YYDLVLYASPVAGAAPPPWAE EEEEEEEECCCCCCCCCCCCC >Mature Secondary Structure SVAPSVDPPIPGFEQRPLFLLQPRSGLGNIYGPQIVQRSSHVIAAIDDEPSDSDTVHGV CCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCCCC PRWSSRQFIEQAAQHSQALAIDFSYSPGESGLARKLCEQAGIERVGACLAVAHCGLPAVY CCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCHHHHHHHHHHHHCCCCCCC EPAQVYRQRTLLRLDEFLRIADRLDDDLSVFTLYSNLLFRLTYDSSLLLDCWATPINEYF CHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHH SEYADTSTFQLGQREHFCDGGAFQGPIVHKFLEASRHCYESITAFEPDRINFQKLESIAS HHHCCCCHHCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHH ALPLPPHNFKALKKAISNEQTTLRFEETGTVSSHVSPDGGISVATTRLDDELEKLTLLKL HCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCEEEEEHHHHHHHHEEEEEE DIEGFEARALEGASHLIRTQLPRMAICVYHYAQDLLDIVEQLDKLVEGYHFRLRQHSPGH ECCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCC YYDLVLYASPVAGAAPPPWAE EEEEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA