Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is fliK [C]

Identifier: 21242693

GI number: 21242693

Start: 2279584

End: 2280756

Strand: Reverse

Name: fliK [C]

Synonym: XAC1949

Alternate gene names: 21242693

Gene position: 2280756-2279584 (Counterclockwise)

Preceding gene: 21242694

Following gene: 21242692

Centisome position: 44.07

GC content: 70.16

Gene sequence:

>1173_bases
ATGCTCAATCCGGCCAACACGCCGAACCAGGCCCCGCCGCAGGCACCCGAACGCGTGCCTGCCAAGCAGTCCGCGCCCAA
GCCCAACCAGTCCGACAAGAACCGCAGCGACGAGGACACCCGCGACGATGCGGCCGGCGATGCCACCGCCCGGCCGCGGG
CGCAGGACGGCGATGCCAAGCAGGCCAAGCCAAGTACCGCCAAGGACGCGGCAACGACCGATAAGAGCACGGCGGCCACC
GCCACCAAGACGGGCAAACCCGCCAAGGCCACCGCTACCAGCGAAGACGCGCCCGCAGAGACAGCCACCGCGACCGATGC
CGGCTGGCCGCCGGCTGGGCTGGGTGGCTTCGGCATGGGCCTGCTGGCACAGGCGCTGCCGGGTGGCGATGTGCTGGCGG
CCGCAGCGGCGGCACTGACGGCCAGCATGGCCGGTGCCAACGGCGCTACCGCGACGGCCACCGCACTGCCCACCGATGCA
ACCGCAGCCGCCACTGCAAACGCTGGCACCGCCCTGCCCGCGCTGGGAGCGCTGGTGCCGACTGCCGTCGCAGGCGCCAA
GCCGACTTCGACCACCGCCGTGAGCGGCGACGCGCAGACCGCCGCGTTGATGAGCATGGCCGCCAAGGCGCTGGAACCGG
CTGCCGACGACAGCGCCGCCCCGGCAACGCCGGATGCCCCGGCGTTCGTGTTGCCGACCACTACCGCACCGGCGCTGACC
CGTCTGCAGGAAGCGGCACCGATCTTCAGCGCCTCGCCCACGCCCACCCCGGACCTGGGCAGCGACAATTTCGACGACGC
CATCGGCGCGCGCATGAGCTGGCTGGCCGACCAGAAGATCGGTCATGCCCACATCAAGGTGACGCCGAACGAGATGGGTC
CGGTCGAGGTGCGCCTGCATCTGGAGGGCGACAAGGTCAATGCCAGCTTCACCGCCGCCAATGCCGACACCCGCCAGGCA
CTGGAACAGAGCCTGCCGCGGCTGCGCGAAATGCTCGGCCAGAACGGCTTTCAACTTGGCCAGGCCGATGTCGGTCAGCA
ACAGCAGAATTCGGCGGGCAATCGCAATGGCGGCAACGACAACGGCAACGGCCTGACCCTGGACGACGCCCCGCCCGTCG
GAATTCCGTCGGTGGTGTTACGCCAGCGTGGATTGCTGGACGCCTACGCCTGA

Upstream 100 bases:

>100_bases
CTTCGCCGCCGGCCTTGGTGCGCTTGCCGGCACCGGCAAGAAATCCAGCTACAGCGACCCGTCGTCCGAACCGGACGCAG
GCCAGGACCAGTTTGCGCGC

Downstream 100 bases:

>100_bases
AACGACGTACCGGGCATACCCCGGCGCCGCCGATCCGCGCGCTCGGCCGGTAGCCGATGACGCCCCTCCACCCCCGCAGC
GCAAGGGCTGCGGGGGCTTT

Product: flagellar protein

Products: NA

Alternate protein names: Flagellar Hook-Length Control Protein; Flagellar Hook Length Control Protein; Flagellar Hook-Length Control Protein-Like Protein

Number of amino acids: Translated: 390; Mature: 390

Protein sequence:

>390_residues
MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAKQAKPSTAKDAATTDKSTAAT
ATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDA
TAAATANAGTALPALGALVPTAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT
RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLEGDKVNASFTAANADTRQA
LEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGNDNGNGLTLDDAPPVGIPSVVLRQRGLLDAYA

Sequences:

>Translated_390_residues
MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAKQAKPSTAKDAATTDKSTAAT
ATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDA
TAAATANAGTALPALGALVPTAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT
RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLEGDKVNASFTAANADTRQA
LEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGNDNGNGLTLDDAPPVGIPSVVLRQRGLLDAYA
>Mature_390_residues
MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAKQAKPSTAKDAATTDKSTAAT
ATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDA
TAAATANAGTALPALGALVPTAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT
RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLEGDKVNASFTAANADTRQA
LEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGNDNGNGLTLDDAPPVGIPSVVLRQRGLLDAYA

Specific function: Controls The Length Of The Flagellar Hook. [C]

COG id: COG3144

COG function: function code N; Flagellar hook-length control protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38908; Mature: 38908

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
QAKPSTAKDAATTDKSTAATATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMG
CCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDATAAATANAGTALPALGALVP
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHHHHHH
TAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT
HHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHH
RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLH
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
LEGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGND
ECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCCCCCCC
NGNGLTLDDAPPVGIPSVVLRQRGLLDAYA
CCCEEEECCCCCCCCHHHHHHHCCCHHHCC
>Mature Secondary Structure
MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
QAKPSTAKDAATTDKSTAATATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMG
CCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDATAAATANAGTALPALGALVP
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHHHHHH
TAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT
HHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHH
RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLH
HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE
LEGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGND
ECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCCCCCCC
NGNGLTLDDAPPVGIPSVVLRQRGLLDAYA
CCCEEEECCCCCCCCHHHHHHHCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA