| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is fliK [C]
Identifier: 21242693
GI number: 21242693
Start: 2279584
End: 2280756
Strand: Reverse
Name: fliK [C]
Synonym: XAC1949
Alternate gene names: 21242693
Gene position: 2280756-2279584 (Counterclockwise)
Preceding gene: 21242694
Following gene: 21242692
Centisome position: 44.07
GC content: 70.16
Gene sequence:
>1173_bases ATGCTCAATCCGGCCAACACGCCGAACCAGGCCCCGCCGCAGGCACCCGAACGCGTGCCTGCCAAGCAGTCCGCGCCCAA GCCCAACCAGTCCGACAAGAACCGCAGCGACGAGGACACCCGCGACGATGCGGCCGGCGATGCCACCGCCCGGCCGCGGG CGCAGGACGGCGATGCCAAGCAGGCCAAGCCAAGTACCGCCAAGGACGCGGCAACGACCGATAAGAGCACGGCGGCCACC GCCACCAAGACGGGCAAACCCGCCAAGGCCACCGCTACCAGCGAAGACGCGCCCGCAGAGACAGCCACCGCGACCGATGC CGGCTGGCCGCCGGCTGGGCTGGGTGGCTTCGGCATGGGCCTGCTGGCACAGGCGCTGCCGGGTGGCGATGTGCTGGCGG CCGCAGCGGCGGCACTGACGGCCAGCATGGCCGGTGCCAACGGCGCTACCGCGACGGCCACCGCACTGCCCACCGATGCA ACCGCAGCCGCCACTGCAAACGCTGGCACCGCCCTGCCCGCGCTGGGAGCGCTGGTGCCGACTGCCGTCGCAGGCGCCAA GCCGACTTCGACCACCGCCGTGAGCGGCGACGCGCAGACCGCCGCGTTGATGAGCATGGCCGCCAAGGCGCTGGAACCGG CTGCCGACGACAGCGCCGCCCCGGCAACGCCGGATGCCCCGGCGTTCGTGTTGCCGACCACTACCGCACCGGCGCTGACC CGTCTGCAGGAAGCGGCACCGATCTTCAGCGCCTCGCCCACGCCCACCCCGGACCTGGGCAGCGACAATTTCGACGACGC CATCGGCGCGCGCATGAGCTGGCTGGCCGACCAGAAGATCGGTCATGCCCACATCAAGGTGACGCCGAACGAGATGGGTC CGGTCGAGGTGCGCCTGCATCTGGAGGGCGACAAGGTCAATGCCAGCTTCACCGCCGCCAATGCCGACACCCGCCAGGCA CTGGAACAGAGCCTGCCGCGGCTGCGCGAAATGCTCGGCCAGAACGGCTTTCAACTTGGCCAGGCCGATGTCGGTCAGCA ACAGCAGAATTCGGCGGGCAATCGCAATGGCGGCAACGACAACGGCAACGGCCTGACCCTGGACGACGCCCCGCCCGTCG GAATTCCGTCGGTGGTGTTACGCCAGCGTGGATTGCTGGACGCCTACGCCTGA
Upstream 100 bases:
>100_bases CTTCGCCGCCGGCCTTGGTGCGCTTGCCGGCACCGGCAAGAAATCCAGCTACAGCGACCCGTCGTCCGAACCGGACGCAG GCCAGGACCAGTTTGCGCGC
Downstream 100 bases:
>100_bases AACGACGTACCGGGCATACCCCGGCGCCGCCGATCCGCGCGCTCGGCCGGTAGCCGATGACGCCCCTCCACCCCCGCAGC GCAAGGGCTGCGGGGGCTTT
Product: flagellar protein
Products: NA
Alternate protein names: Flagellar Hook-Length Control Protein; Flagellar Hook Length Control Protein; Flagellar Hook-Length Control Protein-Like Protein
Number of amino acids: Translated: 390; Mature: 390
Protein sequence:
>390_residues MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAKQAKPSTAKDAATTDKSTAAT ATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDA TAAATANAGTALPALGALVPTAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLEGDKVNASFTAANADTRQA LEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGNDNGNGLTLDDAPPVGIPSVVLRQRGLLDAYA
Sequences:
>Translated_390_residues MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAKQAKPSTAKDAATTDKSTAAT ATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDA TAAATANAGTALPALGALVPTAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLEGDKVNASFTAANADTRQA LEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGNDNGNGLTLDDAPPVGIPSVVLRQRGLLDAYA >Mature_390_residues MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAKQAKPSTAKDAATTDKSTAAT ATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMGLLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDA TAAATANAGTALPALGALVPTAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLHLEGDKVNASFTAANADTRQA LEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGNDNGNGLTLDDAPPVGIPSVVLRQRGLLDAYA
Specific function: Controls The Length Of The Flagellar Hook. [C]
COG id: COG3144
COG function: function code N; Flagellar hook-length control protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 10-20 (rich media) [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38908; Mature: 38908
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC QAKPSTAKDAATTDKSTAATATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMG CCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDATAAATANAGTALPALGALVP HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHHHHHH TAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT HHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHH RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLH HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE LEGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGND ECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCCCCCCC NGNGLTLDDAPPVGIPSVVLRQRGLLDAYA CCCEEEECCCCCCCCHHHHHHHCCCHHHCC >Mature Secondary Structure MLNPANTPNQAPPQAPERVPAKQSAPKPNQSDKNRSDEDTRDDAAGDATARPRAQDGDAK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC QAKPSTAKDAATTDKSTAATATKTGKPAKATATSEDAPAETATATDAGWPPAGLGGFGMG CCCCCCCHHHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH LLAQALPGGDVLAAAAAALTASMAGANGATATATALPTDATAAATANAGTALPALGALVP HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHCCCCCCHHHHHHHHHH TAVAGAKPTSTTAVSGDAQTAALMSMAAKALEPAADDSAAPATPDAPAFVLPTTTAPALT HHHCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCHHHHH RLQEAAPIFSASPTPTPDLGSDNFDDAIGARMSWLADQKIGHAHIKVTPNEMGPVEVRLH HHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEE LEGDKVNASFTAANADTRQALEQSLPRLREMLGQNGFQLGQADVGQQQQNSAGNRNGGND ECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHCCCHHHHCCCCCCCCCC NGNGLTLDDAPPVGIPSVVLRQRGLLDAYA CCCEEEECCCCCCCCHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA