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The map label for this gene is recJ [H]

Identifier: 21242609

GI number: 21242609

Start: 2162288

End: 2164024

Strand: Direct

Name: recJ [H]

Synonym: XAC1865

Alternate gene names: 21242609

Gene position: 2162288-2164024 (Clockwise)

Preceding gene: 21242608

Following gene: 21242610

Centisome position: 41.78

GC content: 67.01

Gene sequence:

>1737_bases
ATGACTTCGAGTCCGCGGATCGTCCGGCGCTCCTCCGGGCAGGCCGGCAGTTGGCCCGATACCATGTTGCCGCTGCTGCG
CCGCATCTATGCAGCGCGCGGTGTCACCGATGCGCAAGGCGCGCAGCCGCGACTGGGCCAGCTGTTGTCGCCGGAATTGC
TGCACAACAGCGGCGTGGCCGCCGAGCTACTGGCCGACGCGATCGCGCAGCAACGGCGCATTCTGGTGGTGGGCGATTTC
GACTGCGATGGTGCCACCGCCTGTGCCGTCGGTGTGCGCGGCCTGCGCATGCTCGGTGCGCTGGATGTGCACCACGCCGT
GCCCAATCGCATGGTGCATGGCTATGGCTTGTCGCCTGCGTTGGTCGACGAACTGGCGGGGTTGCAGCCGGATGTGCTGG
TCACCGTCGATCACGGCATCGCCTGTCACGCTGGCGTCGCCGCAGCCAAAGCGCGCGGCTGGACGGTGCTGGTCACCGAT
CACCATCTGCCGGGCGAGGTGCTGCCGCCGGCCGATGCGATCGTCGACCCGAACCTGGCCGAAGACACCTTCCCCAGCAA
GACCCTGGCCGGGGTCGGGGTGATCTTTTACGTGTTGTTGGCATTGCGACAGGTGTTGCGCGCACGCGGCGCCTTCGCCC
AGCGTGCCGAGCCTGACCTGTCGGTGCTGCTGGATCTGGTCGCAGTCGGCACCGTTGCCGATTTGGTACCGCTGGACACC
AATAACCGTGCGCTGGTGTCGGCTGGATTGCGTCGCCTGCGCGAGGGCAAGGGCTGCATCGGGTTGCGTGCCTTGATCGA
TGCCAGCGGCCGCGATGTGGCGCGGCTGAGCGCCAGCGATATCGGGTTTGCGCTCGGGCCACGCCTCAATGCCGCCGGGC
GGCTCGAGGACATGGCGCTGGGTATCGAACTGTTGCTCAGCGAAGACTGGAGCCAGGCCCGCGAGATTGCCGGCACGCTG
GAAGAGATCAACGCCGAACGCCGCGCGGTGCAGCAGTTGATGACCGACGATGCCGAGCACGCCGTCACCAAGGTGGTGCT
GGATGGCGATGGTGCATTGCCGATCGCCGCATGCCTGTTCGATGCCGAATGGCACCCGGGCGTGATCGGTCTGGTGGCCT
CCAAACTCAAGGACCGCCTGCACCGTCCGGTGATCGCGCTGGCACCGGCCGAGCCGGGCAGCAGCCAGTTGCGGGGTTCG
GCGCGTTCGATTCCCGGCCTGCATATCCGCGATGTGCTGGCGGCGGTGGACGCGCGGCATCCCGGATTGATCCAGAAGTT
CGGCGGCCATGCGATGGCGGCCGGGTTGAGTATCGACCATGCGGCATTGGCCACGTTCGAGCAGGCCTTCCAGGCGCAGG
TGACGGCGATGGTGGATGCCTCGCTGCTGCATGCCCAATTGCATAGCGACGGCGAACTGGCCGCGCACGAACTCGATCAC
CTGCACGCCGAAGCGCTGCGCGTGGCCGGTCCATGGGGGCAGGGCTTTCCCGAGCCGCTGTTCGATGGTCAGTTCGAGGT
GCTGCAGCACCGCGTGCTCAAGGAACGCCATCTCAAGTTGACACTGCGGTGCCCCGGACGCGCGGAACCGCTCAATGCCA
TCCACTTCAACGGTTGGCGCGGCAGCGATCCCGCGCGCTTGGTGCGGCTGGCCTATCGGTTGGTCGCCGACGACTATCGC
GGCGGCACGGCAGTGCAGTTGATCGTGGAGCATTGCGAGCCGGTGGCGTTGGCGTAA

Upstream 100 bases:

>100_bases
TGGATCGGTTGGTGTTGGACTTCCAGGACGGCGAAAGCGTGTCGCTCACGCACGCCCAGCGCTGGCGTTTCTGGCGCAAG
CCGCGGGTACAGCTGGCGCA

Downstream 100 bases:

>100_bases
CACATCGCCGGAATCCGGCGTAGCCATGGCAGGGCTGTTGCCGATGAGACCGCTATTGCATTTCGTAAATGTTGCTGAGA
AGCTCCCGATGGCTGCCGCG

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 578; Mature: 577

Protein sequence:

>578_residues
MTSSPRIVRRSSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVAAELLADAIAQQRRILVVGDF
DCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPALVDELAGLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTD
HHLPGEVLPPADAIVDPNLAEDTFPSKTLAGVGVIFYVLLALRQVLRARGAFAQRAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMALGIELLLSEDWSQAREIAGTL
EEINAERRAVQQLMTDDAEHAVTKVVLDGDGALPIAACLFDAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGS
ARSIPGLHIRDVLAAVDARHPGLIQKFGGHAMAAGLSIDHAALATFEQAFQAQVTAMVDASLLHAQLHSDGELAAHELDH
LHAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCPGRAEPLNAIHFNGWRGSDPARLVRLAYRLVADDYR
GGTAVQLIVEHCEPVALA

Sequences:

>Translated_578_residues
MTSSPRIVRRSSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVAAELLADAIAQQRRILVVGDF
DCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPALVDELAGLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTD
HHLPGEVLPPADAIVDPNLAEDTFPSKTLAGVGVIFYVLLALRQVLRARGAFAQRAEPDLSVLLDLVAVGTVADLVPLDT
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMALGIELLLSEDWSQAREIAGTL
EEINAERRAVQQLMTDDAEHAVTKVVLDGDGALPIAACLFDAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGS
ARSIPGLHIRDVLAAVDARHPGLIQKFGGHAMAAGLSIDHAALATFEQAFQAQVTAMVDASLLHAQLHSDGELAAHELDH
LHAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCPGRAEPLNAIHFNGWRGSDPARLVRLAYRLVADDYR
GGTAVQLIVEHCEPVALA
>Mature_577_residues
TSSPRIVRRSSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVAAELLADAIAQQRRILVVGDFD
CDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPALVDELAGLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTDH
HLPGEVLPPADAIVDPNLAEDTFPSKTLAGVGVIFYVLLALRQVLRARGAFAQRAEPDLSVLLDLVAVGTVADLVPLDTN
NRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMALGIELLLSEDWSQAREIAGTLE
EINAERRAVQQLMTDDAEHAVTKVVLDGDGALPIAACLFDAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGSA
RSIPGLHIRDVLAAVDARHPGLIQKFGGHAMAAGLSIDHAALATFEQAFQAQVTAMVDASLLHAQLHSDGELAAHELDHL
HAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCPGRAEPLNAIHFNGWRGSDPARLVRLAYRLVADDYRG
GTAVQLIVEHCEPVALA

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=580, Percent_Identity=47.0689655172414, Blast_Score=509, Evalue=1e-145,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 61490; Mature: 61359

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSSPRIVRRSSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVA
CCCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCCHH
AELLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPA
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHH
LVDELAGLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEVLPPADAIVDPNLA
HHHHHCCCCCCEEEEECCCCCHHCCHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCC
EDTFPSKTLAGVGVIFYVLLALRQVLRARGAFAQRAEPDLSVLLDLVAVGTVADLVPLDT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHEECCC
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
CCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCHHHHHH
GIELLLSEDWSQAREIAGTLEEINAERRAVQQLMTDDAEHAVTKVVLDGDGALPIAACLF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHC
DAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGSARSIPGLHIRDVLAAVDARH
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHCCCCCHHHHHHHHHHCCC
PGLIQKFGGHAMAAGLSIDHAALATFEQAFQAQVTAMVDASLLHAQLHSDGELAAHELDH
CCHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LHAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCPGRAEPLNAIHFNGWR
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
GSDPARLVRLAYRLVADDYRGGTAVQLIVEHCEPVALA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSSPRIVRRSSGQAGSWPDTMLPLLRRIYAARGVTDAQGAQPRLGQLLSPELLHNSGVA
CCCCCEEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCHHHHHCCCHH
AELLADAIAQQRRILVVGDFDCDGATACAVGVRGLRMLGALDVHHAVPNRMVHGYGLSPA
HHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHH
LVDELAGLQPDVLVTVDHGIACHAGVAAAKARGWTVLVTDHHLPGEVLPPADAIVDPNLA
HHHHHCCCCCCEEEEECCCCCHHCCHHHHHCCCCEEEEECCCCCCCCCCCCHHHCCCCCC
EDTFPSKTLAGVGVIFYVLLALRQVLRARGAFAQRAEPDLSVLLDLVAVGTVADLVPLDT
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHHHHHHHHHHHHHHHHEECCC
NNRALVSAGLRRLREGKGCIGLRALIDASGRDVARLSASDIGFALGPRLNAAGRLEDMAL
CCCHHHHHHHHHHHCCCCCEEHHHHHCCCCCCEEEECCCCCCEECCCCCCCCCCHHHHHH
GIELLLSEDWSQAREIAGTLEEINAERRAVQQLMTDDAEHAVTKVVLDGDGALPIAACLF
HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHEEEEECCCCCCHHHHHHC
DAEWHPGVIGLVASKLKDRLHRPVIALAPAEPGSSQLRGSARSIPGLHIRDVLAAVDARH
CCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHCCCHHCCCCCHHHHHHHHHHCCC
PGLIQKFGGHAMAAGLSIDHAALATFEQAFQAQVTAMVDASLLHAQLHSDGELAAHELDH
CCHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
LHAEALRVAGPWGQGFPEPLFDGQFEVLQHRVLKERHLKLTLRCPGRAEPLNAIHFNGWR
HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEECCCC
GSDPARLVRLAYRLVADDYRGGTAVQLIVEHCEPVALA
CCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8168497 [H]