| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is feoB [H]
Identifier: 21242599
GI number: 21242599
Start: 2149828
End: 2151687
Strand: Direct
Name: feoB [H]
Synonym: XAC1855
Alternate gene names: 21242599
Gene position: 2149828-2151687 (Clockwise)
Preceding gene: 21242598
Following gene: 21242600
Centisome position: 41.54
GC content: 66.02
Gene sequence:
>1860_bases ATGAGCGCGGCCAGCGTTCCGCTGCGTCTGGCGCTGGTTGGCAACCCCAACAGCGGCAAGACCGCACTGTTCAACCAGCT CACCGGTAGCCGGCAAAAAGTGGCCAACTACACCGGCGTCACCGTCGAGCGTAAGGAAGGGCACTTCCGCGCACCGTCGG GGCGCGACTTTGCGGTGCTGGATCTGCCCGGCGCCTACAGCCTGCAACCGGCGAGCCTGGACGAGGCCATCACCCGCGAC CTGTGCCGTGGCTTTTATCCGGGCGAGCCGGCGCCGGATGTGCTGGTCTATGTGATGGACGCGACCAATCTGCGCCTGCA TCTGCGCTTTGCGTTGGAGCTGCGCGAGCTCGGCCGACCGATGATCGTGGCGCTGAACATGATGGATGCCGCACAGCGGC GCGGCATTGTCATCGACCTGCCGGCGCTGGAGCAGGCGCTCGGCGTGCCGGTGGTCGAAACGGTGGCGGTGCGGCGCGGT GGTGCCAAGGTGCTGGTCGAGCGACTCGATGCGCAGGCGGCGCGCCTGGCGGCGCCCGCCGCCAATCCGCCGGCCGACGG TAATTATCACGCGCTGGTGCGGCAGATCCTGGGCGCAGCGGTGACCATGCCCACCCGCACCTCGCGCGTGGACGATGCGC TGGACCGCTGGCTGGTGCATCCGATCTGGGGCCTGGTCACGCTGGCGGTGGTGATGTTCCTGATCTTCCAGGCGGTCTAT GCCTGGGCTGCGCCGGTCATGGACCTGATCGACGGCGGCACCGCTGCCTTGGGCGATTGGGTCGGCGCGACCCTGCCGGA AGGTCCACTCAACAGCTTGCTCAAGGATGGCGTCATCGCCGGGCTGGGCGGGGTGATCGTGTTCCTGCCGCAGATCCTGA TCCTGTTCGCCTTCATCCTGGCATTGGAAGAATCCGGCTATCTGCCACGTGCGGCGTTTCTGCTCGATCGCATGATGTCG GTGGCCGGTTTGTCGGGGCGCTCGTTCATTCCGCTGTTGTCGAGTTTTGCATGTGCGGTGCCGGGCATCATGTCCACGCG CAGCATCCAGGACCCGCGCGACCGGCTCGCCACCATCATGGTCGCGCCGCTGATGACCTGTTCGGCGCGGCTGCCGGTGT ATGCGTTGTTGATCGGCGCCTTCATTCCGCAGAAGACCGTGTGGGGCATCTTCAACCAGCAGGGGCTGGTGCTGTTCGGT CTGTACGCTGCGGCTATCGTCAGTGCGCTGCTGGTCTCGTGGACGATGAAGAAATGGCGGCGCGACAAGAGCGAGCACCC GTTGATGCTGGAGCTGCCGTCCTATCGCGTCCCGCAGGTGCGCGATCTGGCGCTGGGGCTGTGGGAGCGCGCATGGATCT TCCTCAAGCGCGTGGGCGGCATCATCCTGGCGCTGACCATCCTGCTGTGGTTCCTGCTGTCGTTTCCCGAGGCGCCGGCC AATGCCACCTTGCCGGCAATCGACTACAGCTTCGCCGGTCGTATCGGTCACGCAATGGCAGTGTTCTTCGCACCGCTGGG CTTCAACTGGCAGATCTGCATCGCGTTGATTCCCGGCCTGGCTGCGCGCGAAGTGGCGGTGGCCTCGCTGGCCACGGTGT ACGCGTTGTCCGCTGCCGACGACGACGCGGCAGCCCAGGCGCTGTCGCCGCTGATCAGCGACGGTTGGTCGCTGGCCACC GCGTTGTCGCTGCTGGTCTGGTACATCTACGCGCCGATGTGCATCTCCACGCTGGCCACGATCAAGCGCGAAACCAACTC GTGGAAGCAGATGACCATCAGTGCGGTGTACCTGTTCGCGCTGGCCTACCTGGCGTCGCTGGTGACCTACCAGCTGGCCG TGCTGCTGGGAGCCGGCTGA
Upstream 100 bases:
>100_bases TCGGTCGCGAGCCATTGTTGGTGCAGGTGGGCTACACGCGTTTTGCCCTGCGCCGCAGCGAGGCTGCGCGCGTGCAGGTG CGCCATGCGGGAGGATCGGC
Downstream 100 bases:
>100_bases GATGACGCTTCCGCTCACGCTGCAATACCTGGTGATCGCCATCGCAGTGCTGGTCAGCCTGTGGGTGGTGATGAAGAAAC AGTTTCCCGGTGTATTGCGT
Product: ferrous iron transport protein B
Products: Fe (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MSAASVPLRLALVGNPNSGKTALFNQLTGSRQKVANYTGVTVERKEGHFRAPSGRDFAVLDLPGAYSLQPASLDEAITRD LCRGFYPGEPAPDVLVYVMDATNLRLHLRFALELRELGRPMIVALNMMDAAQRRGIVIDLPALEQALGVPVVETVAVRRG GAKVLVERLDAQAARLAAPAANPPADGNYHALVRQILGAAVTMPTRTSRVDDALDRWLVHPIWGLVTLAVVMFLIFQAVY AWAAPVMDLIDGGTAALGDWVGATLPEGPLNSLLKDGVIAGLGGVIVFLPQILILFAFILALEESGYLPRAAFLLDRMMS VAGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLATIMVAPLMTCSARLPVYALLIGAFIPQKTVWGIFNQQGLVLFG LYAAAIVSALLVSWTMKKWRRDKSEHPLMLELPSYRVPQVRDLALGLWERAWIFLKRVGGIILALTILLWFLLSFPEAPA NATLPAIDYSFAGRIGHAMAVFFAPLGFNWQICIALIPGLAAREVAVASLATVYALSAADDDAAAQALSPLISDGWSLAT ALSLLVWYIYAPMCISTLATIKRETNSWKQMTISAVYLFALAYLASLVTYQLAVLLGAG
Sequences:
>Translated_619_residues MSAASVPLRLALVGNPNSGKTALFNQLTGSRQKVANYTGVTVERKEGHFRAPSGRDFAVLDLPGAYSLQPASLDEAITRD LCRGFYPGEPAPDVLVYVMDATNLRLHLRFALELRELGRPMIVALNMMDAAQRRGIVIDLPALEQALGVPVVETVAVRRG GAKVLVERLDAQAARLAAPAANPPADGNYHALVRQILGAAVTMPTRTSRVDDALDRWLVHPIWGLVTLAVVMFLIFQAVY AWAAPVMDLIDGGTAALGDWVGATLPEGPLNSLLKDGVIAGLGGVIVFLPQILILFAFILALEESGYLPRAAFLLDRMMS VAGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLATIMVAPLMTCSARLPVYALLIGAFIPQKTVWGIFNQQGLVLFG LYAAAIVSALLVSWTMKKWRRDKSEHPLMLELPSYRVPQVRDLALGLWERAWIFLKRVGGIILALTILLWFLLSFPEAPA NATLPAIDYSFAGRIGHAMAVFFAPLGFNWQICIALIPGLAAREVAVASLATVYALSAADDDAAAQALSPLISDGWSLAT ALSLLVWYIYAPMCISTLATIKRETNSWKQMTISAVYLFALAYLASLVTYQLAVLLGAG >Mature_618_residues SAASVPLRLALVGNPNSGKTALFNQLTGSRQKVANYTGVTVERKEGHFRAPSGRDFAVLDLPGAYSLQPASLDEAITRDL CRGFYPGEPAPDVLVYVMDATNLRLHLRFALELRELGRPMIVALNMMDAAQRRGIVIDLPALEQALGVPVVETVAVRRGG AKVLVERLDAQAARLAAPAANPPADGNYHALVRQILGAAVTMPTRTSRVDDALDRWLVHPIWGLVTLAVVMFLIFQAVYA WAAPVMDLIDGGTAALGDWVGATLPEGPLNSLLKDGVIAGLGGVIVFLPQILILFAFILALEESGYLPRAAFLLDRMMSV AGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLATIMVAPLMTCSARLPVYALLIGAFIPQKTVWGIFNQQGLVLFGL YAAAIVSALLVSWTMKKWRRDKSEHPLMLELPSYRVPQVRDLALGLWERAWIFLKRVGGIILALTILLWFLLSFPEAPAN ATLPAIDYSFAGRIGHAMAVFFAPLGFNWQICIALIPGLAAREVAVASLATVYALSAADDDAAAQALSPLISDGWSLATA LSLLVWYIYAPMCISTLATIKRETNSWKQMTISAVYLFALAYLASLVTYQLAVLLGAG
Specific function: Fe(2+) uptake system, probably driven by GTP (Probable) [H]
COG id: COG0370
COG function: function code P; Fe2+ transport system protein B
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the feoB (TC 9.A.8) family [H]
Homologues:
Organism=Escherichia coli, GI1789813, Length=534, Percent_Identity=29.5880149812734, Blast_Score=193, Evalue=3e-50,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003373 - InterPro: IPR011640 - InterPro: IPR011619 - InterPro: IPR011642 - InterPro: IPR006073 - InterPro: IPR005225 [H]
Pfam domain/function: PF07664 FeoB_C; PF02421 FeoB_N; PF07670 Gate [H]
EC number: NA
Molecular weight: Translated: 66760; Mature: 66629
Theoretical pI: Translated: 8.63; Mature: 8.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAASVPLRLALVGNPNSGKTALFNQLTGSRQKVANYTGVTVERKEGHFRAPSGRDFAVL CCCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHCCCCCEEECCCCCEECCCCCCEEEE DLPGAYSLQPASLDEAITRDLCRGFYPGEPAPDVLVYVMDATNLRLHLRFALELRELGRP ECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHCCCC MIVALNMMDAAQRRGIVIDLPALEQALGVPVVETVAVRRGGAKVLVERLDAQAARLAAPA EEEEEHHHHHHHHCCEEEECHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC ANPPADGNYHALVRQILGAAVTMPTRTSRVDDALDRWLVHPIWGLVTLAVVMFLIFQAVY CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAAPVMDLIDGGTAALGDWVGATLPEGPLNSLLKDGVIAGLGGVIVFLPQILILFAFIL HHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ALEESGYLPRAAFLLDRMMSVAGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLATIM HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH VAPLMTCSARLPVYALLIGAFIPQKTVWGIFNQQGLVLFGLYAAAIVSALLVSWTMKKWR HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDKSEHPLMLELPSYRVPQVRDLALGLWERAWIFLKRVGGIILALTILLWFLLSFPEAPA CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NATLPAIDYSFAGRIGHAMAVFFAPLGFNWQICIALIPGLAAREVAVASLATVYALSAAD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHCCC DDAAAQALSPLISDGWSLATALSLLVWYIYAPMCISTLATIKRETNSWKQMTISAVYLFA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAYLASLVTYQLAVLLGAG HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SAASVPLRLALVGNPNSGKTALFNQLTGSRQKVANYTGVTVERKEGHFRAPSGRDFAVL CCCCCCEEEEEEECCCCCCHHHHHHHCCCHHHHHCCCCCEEECCCCCEECCCCCCEEEE DLPGAYSLQPASLDEAITRDLCRGFYPGEPAPDVLVYVMDATNLRLHLRFALELRELGRP ECCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCEEEEEHHHHHHHHCCCC MIVALNMMDAAQRRGIVIDLPALEQALGVPVVETVAVRRGGAKVLVERLDAQAARLAAPA EEEEEHHHHHHHHCCEEEECHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC ANPPADGNYHALVRQILGAAVTMPTRTSRVDDALDRWLVHPIWGLVTLAVVMFLIFQAVY CCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWAAPVMDLIDGGTAALGDWVGATLPEGPLNSLLKDGVIAGLGGVIVFLPQILILFAFIL HHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH ALEESGYLPRAAFLLDRMMSVAGLSGRSFIPLLSSFACAVPGIMSTRSIQDPRDRLATIM HHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHCCCCCCCHHHHHHHHH VAPLMTCSARLPVYALLIGAFIPQKTVWGIFNQQGLVLFGLYAAAIVSALLVSWTMKKWR HHHHHHHHCCCHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RDKSEHPLMLELPSYRVPQVRDLALGLWERAWIFLKRVGGIILALTILLWFLLSFPEAPA CCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC NATLPAIDYSFAGRIGHAMAVFFAPLGFNWQICIALIPGLAAREVAVASLATVYALSAAD CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEHHHHHCCCHHHHHHHHHHHHHHHHHCCC DDAAAQALSPLISDGWSLATALSLLVWYIYAPMCISTLATIKRETNSWKQMTISAVYLFA CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH LAYLASLVTYQLAVLLGAG HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Fe (II) [Periplasm] [C]
Specific reaction: Fe (II) [Periplasm] = Fe (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA