| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242596
Identifier: 21242596
GI number: 21242596
Start: 2148291
End: 2148695
Strand: Reverse
Name: 21242596
Synonym: XAC1852
Alternate gene names: NA
Gene position: 2148695-2148291 (Counterclockwise)
Preceding gene: 21242597
Following gene: 21242595
Centisome position: 41.52
GC content: 70.12
Gene sequence:
>405_bases GTGGGTGCCGGAGAGCATGGCGTGATCGACCATATCGGCCTGGCCTGCAGCGATCTGCAAACCAGCACCGCGTTCTACCA GGCCGCGCTCGCGCCCCTGGGCATCGCGCTGCTGGTGGAACTGACGGCCGCGCAGACCGGCGGCCGCGCGCATGCCGGCT TCGGCACCGAACGCCCGTTTCTCTGGCTGGGCTCCCACGCGCAGACGCCGGGCACCACCCATGTCGCGCTGACGGCGACC GACCGCGACAGCGTCGATGCGTTTCATCGTGCTGCGCTGGCCGCCGGCGGCCGCGATCACGGCGCCCCCGGCCTGCGCCC GCATTACCACCCACACTATTACAGCGCCTTCGTGCTCGACCCTGATGGCCACAATTGCGAAGCGGTCTGCCACCTCCCCG CATGA
Upstream 100 bases:
>100_bases ATGCCATCGATGCCGCCAATGCGGCGTTGATTGCCCGTCTGCGCGTGTCGCCCGAAGGCCAGGAAGGCCTGGGGGCGTTC CTCGACAAGCGCAGCGCCGC
Downstream 100 bases:
>100_bases GTCTCTTTCCGATGTCCCTGGATTCCTTATTCGCGCATTCGGCCGCCACCACGCATGCGGTTGTGGCGATGCCTGTATGC GGTCATGCGCGCCGCGATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Lactoylglutathione Lyase; Glyoxalase Family Protein; Lactoylglutathione Lyase Protein; Glyoxalase; Glyoxalase/Bleomycin Resistance Protein; Glyoxalase/Dioxygenase; Dioxygenase; Lactoylglutathione Lyase-Like Lyase; Exported Glyoxalase; Asparaginyl-TRNA Synthetase; Glyoxylase; Glyoxalase-Family Protein; Glyoxalase Family Protein Family Protein; Lactoylgluthathione Lyase; Dioxygenase-Family Protein; Glyoxylase Protein
Number of amino acids: Translated: 134; Mature: 133
Protein sequence:
>134_residues MGAGEHGVIDHIGLACSDLQTSTAFYQAALAPLGIALLVELTAAQTGGRAHAGFGTERPFLWLGSHAQTPGTTHVALTAT DRDSVDAFHRAALAAGGRDHGAPGLRPHYHPHYYSAFVLDPDGHNCEAVCHLPA
Sequences:
>Translated_134_residues MGAGEHGVIDHIGLACSDLQTSTAFYQAALAPLGIALLVELTAAQTGGRAHAGFGTERPFLWLGSHAQTPGTTHVALTAT DRDSVDAFHRAALAAGGRDHGAPGLRPHYHPHYYSAFVLDPDGHNCEAVCHLPA >Mature_133_residues GAGEHGVIDHIGLACSDLQTSTAFYQAALAPLGIALLVELTAAQTGGRAHAGFGTERPFLWLGSHAQTPGTTHVALTATD RDSVDAFHRAALAAGGRDHGAPGLRPHYHPHYYSAFVLDPDGHNCEAVCHLPA
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13970; Mature: 13838
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAGEHGVIDHIGLACSDLQTSTAFYQAALAPLGIALLVELTAAQTGGRAHAGFGTERPF CCCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE LWLGSHAQTPGTTHVALTATDRDSVDAFHRAALAAGGRDHGAPGLRPHYHPHYYSAFVLD EEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC PDGHNCEAVCHLPA CCCCCCEEEEECCC >Mature Secondary Structure GAGEHGVIDHIGLACSDLQTSTAFYQAALAPLGIALLVELTAAQTGGRAHAGFGTERPF CCCCCCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCE LWLGSHAQTPGTTHVALTATDRDSVDAFHRAALAAGGRDHGAPGLRPHYHPHYYSAFVLD EEECCCCCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEC PDGHNCEAVCHLPA CCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA