| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242568
Identifier: 21242568
GI number: 21242568
Start: 2119655
End: 2120386
Strand: Direct
Name: 21242568
Synonym: XAC1824
Alternate gene names: NA
Gene position: 2119655-2120386 (Clockwise)
Preceding gene: 77748613
Following gene: 21242570
Centisome position: 40.96
GC content: 69.54
Gene sequence:
>732_bases ATGATCGCCGTTGCCGCCGTCTTGTGCGGGTGGGCAGCGGCCGGTGCGGCCAGTGCGGCCGATGCATTGGCTGGATCGCC GGTCCCGCCACTGGGCGCCCCGCGTGTGGGTCTGGTCGAGGCGCTGGCGCGCCAGGCGCCGTCGCTGGACCGTCAGGTGC TGGCCCTGGCCACAGAGGCGCTGCAATGCGCCCGCCAGCACCAGCAGGTGGGTGCCGAACGGGTGCTCAGCGTCATCGAC TACAGCCGGCCCTCGACCGAGCGCCGGCTCTGGGTGTTCGATCTGGACAAGCAACGCCTGTTGTTTCGCGAATGGGTCGC GCACGGGCGCAATACCGGCGAGAACCTGGCGGCGAAGTTCTCCAATAACGACGGCAGCTTCCAGTCCAGCCTGGGCGCAT TCACCGCGCAGGAGTCGTACACCGGGCACAACGGTTACTCGTTGCGGCTCAAGGGTCTGGAGCCGGGGTTCAACGACCAC GCGCGCGACCGCGCCATCGTGATCCACGGCGCGCCCTATGTCAGCGAAGCCATCATCCGCACGCAGGGCCGGCTCGGCCG CAGCCTGGGCTGCCCGGCGGTGCGGCCAGCGGTGGCCAAGCAGTTGATCGATACATTGCGCGACGGTGCGTTCGTGTTCG CCTACTACCCGGATCGCGCCTGGCTGCGCCAATCGCGGCTGCTGAGCAGTGGCTGTGGCGGTGCGGCAGCGCGTGCAGTG GCCGGGCGCTGA
Upstream 100 bases:
>100_bases AGCCACCGGGGTTGGAAAGTGGCCCATATGCGGCTATTTCTAGGGGGTGCGGCCCCGCTGTGGCGCCGCGTCCGCTGTGG GTTGTTGCATGTCTGATCGA
Downstream 100 bases:
>100_bases GTGATCGCAGGCGGGTGCCCGACGCCAGTGTGCGCTCGGCGTGAAGCACGGCGCCGCTTTCGAATCGGTCGGTAAGTCGC TGCGCGGCTGTCAGCATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 243; Mature: 243
Protein sequence:
>243_residues MIAVAAVLCGWAAAGAASAADALAGSPVPPLGAPRVGLVEALARQAPSLDRQVLALATEALQCARQHQQVGAERVLSVID YSRPSTERRLWVFDLDKQRLLFREWVAHGRNTGENLAAKFSNNDGSFQSSLGAFTAQESYTGHNGYSLRLKGLEPGFNDH ARDRAIVIHGAPYVSEAIIRTQGRLGRSLGCPAVRPAVAKQLIDTLRDGAFVFAYYPDRAWLRQSRLLSSGCGGAAARAV AGR
Sequences:
>Translated_243_residues MIAVAAVLCGWAAAGAASAADALAGSPVPPLGAPRVGLVEALARQAPSLDRQVLALATEALQCARQHQQVGAERVLSVID YSRPSTERRLWVFDLDKQRLLFREWVAHGRNTGENLAAKFSNNDGSFQSSLGAFTAQESYTGHNGYSLRLKGLEPGFNDH ARDRAIVIHGAPYVSEAIIRTQGRLGRSLGCPAVRPAVAKQLIDTLRDGAFVFAYYPDRAWLRQSRLLSSGCGGAAARAV AGR >Mature_243_residues MIAVAAVLCGWAAAGAASAADALAGSPVPPLGAPRVGLVEALARQAPSLDRQVLALATEALQCARQHQQVGAERVLSVID YSRPSTERRLWVFDLDKQRLLFREWVAHGRNTGENLAAKFSNNDGSFQSSLGAFTAQESYTGHNGYSLRLKGLEPGFNDH ARDRAIVIHGAPYVSEAIIRTQGRLGRSLGCPAVRPAVAKQLIDTLRDGAFVFAYYPDRAWLRQSRLLSSGCGGAAARAV AGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25963; Mature: 25963
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAVAAVLCGWAAAGAASAADALAGSPVPPLGAPRVGLVEALARQAPSLDRQVLALATEA CHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LQCARQHQQVGAERVLSVIDYSRPSTERRLWVFDLDKQRLLFREWVAHGRNTGENLAAKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHEEE SNNDGSFQSSLGAFTAQESYTGHNGYSLRLKGLEPGFNDHARDRAIVIHGAPYVSEAIIR CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHH TQGRLGRSLGCPAVRPAVAKQLIDTLRDGAFVFAYYPDRAWLRQSRLLSSGCGGAAARAV HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHH AGR CCC >Mature Secondary Structure MIAVAAVLCGWAAAGAASAADALAGSPVPPLGAPRVGLVEALARQAPSLDRQVLALATEA CHHHHHHHHHHHHHCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH LQCARQHQQVGAERVLSVIDYSRPSTERRLWVFDLDKQRLLFREWVAHGRNTGENLAAKF HHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCCHHHEEE SNNDGSFQSSLGAFTAQESYTGHNGYSLRLKGLEPGFNDHARDRAIVIHGAPYVSEAIIR CCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEECCCHHHHHHHH TQGRLGRSLGCPAVRPAVAKQLIDTLRDGAFVFAYYPDRAWLRQSRLLSSGCGGAAARAV HHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHCCCCHHHHHHH AGR CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA