| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242554
Identifier: 21242554
GI number: 21242554
Start: 2083535
End: 2083981
Strand: Reverse
Name: 21242554
Synonym: XAC1810
Alternate gene names: NA
Gene position: 2083981-2083535 (Counterclockwise)
Preceding gene: 21242555
Following gene: 21242553
Centisome position: 40.27
GC content: 65.77
Gene sequence:
>447_bases ATGACCCCACCCATCATCAACCTGCCGCAACGCCTCGGCCGCTCGCGCCGCCTCGCCTACGGCGCCGCCACCGCCGGCGC ATGGATGGTCTACTTCTATCTGTGGGCACCACTGGCAACGCTGATCGCCTGGTTTTTCGGCCTGCGCAGTGCCTACACCG AGCTCTATCTGCAACACAACGCGCTGGACCCGTTCGCTTTGGGCTCCCTACCGGTAATCGCCTTGATGAGCGCGATCACC ACGGTTGGCTGGGCCGAATACAACCGCCTACGCTTCGTCAACGCCGACAAGCGCAGGCGTCCGCGCACCGTCGCCGAACC CGACGTCGACCAGCGCCTGGGCGCCACCGAACAACTCGGCACCCTGCTGCGGCATAGCCGCATCTCCTCGGTGGCGATGG ACAAGTTTGCACGACCGGTGGCGGTGCGGGTGGTGCGGCATCGGTAA
Upstream 100 bases:
>100_bases GGATGATCGGCATGCTCACCGCCGTCATCGCCTTCCCACGTGCCCTGCTCGCGCGCCGCAACAAGCGCGCTCGCTGGAAA AGCCCCGACCGAGGAATCCA
Downstream 100 bases:
>100_bases CAGACGCAGTATTCGAGGGCCGGTGGAAGACCACGTGGCAGGCCTGCGCAGGCAGGCCTTCGTTTACGAACACTGGTCAA GCTTGAAGGTTGTGAGGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 147
Protein sequence:
>148_residues MTPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHNALDPFALGSLPVIALMSAIT TVGWAEYNRLRFVNADKRRRPRTVAEPDVDQRLGATEQLGTLLRHSRISSVAMDKFARPVAVRVVRHR
Sequences:
>Translated_148_residues MTPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHNALDPFALGSLPVIALMSAIT TVGWAEYNRLRFVNADKRRRPRTVAEPDVDQRLGATEQLGTLLRHSRISSVAMDKFARPVAVRVVRHR >Mature_147_residues TPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHNALDPFALGSLPVIALMSAITT VGWAEYNRLRFVNADKRRRPRTVAEPDVDQRLGATEQLGTLLRHSRISSVAMDKFARPVAVRVVRHR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16768; Mature: 16637
Theoretical pI: Translated: 11.68; Mature: 11.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHN CCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ALDPFALGSLPVIALMSAITTVGWAEYNRLRFVNADKRRRPRTVAEPDVDQRLGATEQLG CCCCHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCCCCCHHHHCCCHHHHH TLLRHSRISSVAMDKFARPVAVRVVRHR HHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPPIINLPQRLGRSRRLAYGAATAGAWMVYFYLWAPLATLIAWFFGLRSAYTELYLQHN CCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC ALDPFALGSLPVIALMSAITTVGWAEYNRLRFVNADKRRRPRTVAEPDVDQRLGATEQLG CCCCHHHCHHHHHHHHHHHHHHHHHHHHHEEEECCHHHCCCCCCCCCCHHHHCCCHHHHH TLLRHSRISSVAMDKFARPVAVRVVRHR HHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA