Click here to switch to the map view.

The map label for this gene is regS [H]

Identifier: 21242543

GI number: 21242543

Start: 2070805

End: 2072034

Strand: Reverse

Name: regS [H]

Synonym: XAC1798

Alternate gene names: 21242543

Gene position: 2072034-2070805 (Counterclockwise)

Preceding gene: 21242546

Following gene: 21242542

Centisome position: 40.04

GC content: 68.29

Gene sequence:

>1230_bases
GTGATGAACAGCTCCGACGCTTCCTTCCTGCGGACCCTCTGCAGCCTGCGCTGGCTGGCCACTGCCGGCCAGGCCGCCAC
CATCCTGGTCGCGACCGGGCTGATGGGCCTGAACCTGCCGCAGCAACCCCTGTGGGCCGGCGTGGCCGCGTTGGCGGTCT
TCAACCTGTATGCGCAGCTGCGCGTGGCGCACCGCGGCGCAGTCAGCCCGGCCACCGAGTTCGGCCACATCCTGGTCGAC
GTGACCGTGCTGACCTGGATGGTGGGCTGGAGCGGCGGCATCGCCAACCCGTTCGGCTCGTTATTCCTGGTGCTGATTGC
GCTGGCCGCGTTGGCGCTGCCGCTGAGCTGGGCGATGGCGGTAGCGGCATCGTGCGTGGCCGGCTATGTGATCAGCGCAG
CGTTCGGTCTGCCGCTGCCCTACGGCGGCTTCGACCCGCTCAGCCTGCACATGTGGGGCATGGCGGCCAACTTCCTGCTG
TCCACCGTGGTGGTGCTGGCGTTCGCGACACGGCTGGCTCTTTCGATGCGCGAGCGCGAGCGCGAAATCTCGACCTTGCG
CGAGCGCTTTGCGCGCAACGAAGGCATCGTCGCGCTGGCCACGCATGCGGCCTCGGTGGCGCACGAATTGAACACGCCGC
TGGCCACCATGACCCTGCTGGTGGACGACATCGCCGATCAGTGCGAGCAGGGCGAATTGCGCGAGGACCTGGACACCTTG
CGCGAGCTGCTGGTGCAGTGCCACGAGCGCGTGCTGGCATTGGCAGCACCTGCCGACAACGGCCATCTGAGCCGCGAGGT
GGCCGTGAAAGAAGTGCTGGAACAATGGCGCCTGGTGCGGCCCACCATCGAGCTGCGCCGCAACGAGGACGCGCCAATGC
GCCTGATGCTGCAGCCCGGCGTCAGCCACCTGCTGATGGTGCTGCTCAACAATGCCGCCGATGCCGGCGAACGCGCCGGA
CGCCCGCAGATCGACCTGACCCTGCGCGTGGAACACGACCATCTCAGCGGCGAAGTGCGCGACTACGGACCCGGCTTCGA
CACCGCGCAAGCGATGCTGCCGGGCACGCTATTCAATAGCGGCAAGCACGACGGCATGGGCGTCGGGCTGGCGCTCTCGC
ATGCCACCGTCGAACGCCTGCAGGGCGAGTTGTGGATGCTGCCCGCCGAAGGCAGCGGCGCGCGCGTCGGTTTCCGTCTG
CCGCTCTCCGACCACGAGGCACTCGCATGA

Upstream 100 bases:

>100_bases
TCATCTCAACGTGCATAACACGCTCTAGGCCGATGCGACGGTCTAGGCCGATGCGACGGTTTGTCGCAGGCCACCGTCTT
TCCAAGCGCATAGCATTGCC

Downstream 100 bases:

>100_bases
CAAGTCCCCCGATCCGTACCGGCCTGCTGGTCGACGACGACACCTTGTACCTGCGCACGCTGCAACGCAGCCTTGCACGC
CGCGGCGTGGAAACGCTCAC

Product: two-component system sensor protein

Products: NA

Alternate protein names: Protein prrB [H]

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MMNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLRVAHRGAVSPATEFGHILVD
VTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLL
STVVVLAFATRLALSMREREREISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTL
RELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGVSHLLMVLLNNAADAGERAG
RPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSGKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRL
PLSDHEALA

Sequences:

>Translated_409_residues
MMNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLRVAHRGAVSPATEFGHILVD
VTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLL
STVVVLAFATRLALSMREREREISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTL
RELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGVSHLLMVLLNNAADAGERAG
RPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSGKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRL
PLSDHEALA
>Mature_409_residues
MMNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQLRVAHRGAVSPATEFGHILVD
VTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMAVAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLL
STVVVLAFATRLALSMREREREISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTL
RELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPGVSHLLMVLLNNAADAGERAG
RPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNSGKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRL
PLSDHEALA

Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 44066; Mature: 44066

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQL
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RVAHRGAVSPATEFGHILVDVTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLSTVVVLAFATRLALSMRERE
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTL
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
RELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCC
VSHLLMVLLNNAADAGERAGRPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNS
HHHHHHHHHHCCCCCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHCC
GKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLPLSDHEALA
CCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCC
>Mature Secondary Structure
MMNSSDASFLRTLCSLRWLATAGQAATILVATGLMGLNLPQQPLWAGVAALAVFNLYAQL
CCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
RVAHRGAVSPATEFGHILVDVTVLTWMVGWSGGIANPFGSLFLVLIALAALALPLSWAMA
HHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VAASCVAGYVISAAFGLPLPYGGFDPLSLHMWGMAANFLLSTVVVLAFATRLALSMRERE
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
REISTLRERFARNEGIVALATHAASVAHELNTPLATMTLLVDDIADQCEQGELREDLDTL
HHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHH
RELLVQCHERVLALAAPADNGHLSREVAVKEVLEQWRLVRPTIELRRNEDAPMRLMLQPG
HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHCCCCCCEEEEECCC
VSHLLMVLLNNAADAGERAGRPQIDLTLRVEHDHLSGEVRDYGPGFDTAQAMLPGTLFNS
HHHHHHHHHHCCCCCHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHCCCHHHCC
GKHDGMGVGLALSHATVERLQGELWMLPAEGSGARVGFRLPLSDHEALA
CCCCCCEEEHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7751278; 10358089 [H]