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The map label for this gene is cirA

Identifier: 21242515

GI number: 21242515

Start: 2028015

End: 2030735

Strand: Direct

Name: cirA

Synonym: XAC1769

Alternate gene names: NA

Gene position: 2028015-2030735 (Clockwise)

Preceding gene: 21242514

Following gene: 21242516

Centisome position: 39.18

GC content: 62.4

Gene sequence:

>2721_bases
ATGTCAGTGCAACATCGCCACGTTCCGGCAGGCCGGACTGTGGGTCAGCGTTCGATCCGTGATTTCCGCCGCTCCGTGAT
GGCCATCAGTGTGGCCACGCTGCTGAGCGCGCAGGCCTATGCGCAGGATGCGACCACCACTGCCGCGCCGGCATCGGATG
CGACGACGCAACAGCTGGACACCGTGCAGGTCACCGGTACCCGCAGCAGCGTGACCAAGGCGCAGCTGGTCAAGCAGAAC
GCAGAGCAGATCGTCGATTCCATCGTTGCCGAAGACATCGGCAAGCTGCCCGACAACAACGTGGCCGAAGCGCTGCAGCG
CATCTCCGGAATCCAGATTTCGCGCAACTACGGCGAAGGCAGCTCGATCGCCATCCGCGGCCTCACCCAGGTGCGCACCG
AGCTCAATGGTCGCGACATCTTTACCGCCAACGACGGCCGTGGCCTGAGCTTCGAAGACGTGTCTGCCGAATTGCTCGGT
GGCGTCAATGTCTACAAGAATCCGTCTGCCGACATGATCGAAGGTGGCCTGGGCGGCACGGTCGACCTGCGCACGCGTCT
GCCGTTCGACTACGACGGCCGCAAGATCGCCGGCAGCGTGCAGTACAACTATTACGACCTCGCCGACGACGGCAAGCCGG
CGTTCTCGGGCCTGTTCAGCGATCGCTGGCAGACCGGTATCGGCGAGATCGGCATCCTGGTGAACTACTCGCAGCAGAAG
AGCCCGTTCCGTCAGGACACCATCTCGATCGAGCCGTGGTACACCCAGACCGATCTGCCGGGCTACGAAGGCCAGGGCGT
GTCGGTACCGCACGGCGCCGGCATCAACACCACCGTCGGCGAGCGCGAGCGCAAGACCGGCGCGTTTGCGATGCAGTGGC
GTCCGAACGATGCAGTGGAGGTCTATACGCAGGTGCTGCGTTCGGACTACGACTTCAGCTGGCACGATTATTCGTTCTTC
GCGCTGACCGGCGCCAACCCGATGCAGGGCTTGCCTGGCATCCAGGTCAATAACCGCAACGAGTTCGTCAACGGCTCGTT
CCAGAATGTGCCGACCGAATCCAATACCAGCTTGACCGAGCGGCATTCGGTGACCACCGATTACTCGCTGGGTGCCAAGT
GGACGGTCAACGAAAAGCTGACCCTGAGCACCGACTTCCAGTATGTCGATGCCACCACCACCGGCACGCGCTACATCCTG
TCTACCGGTCAGGTCACCAGCCCGCAGTTCAACGTGGATTTCCGTGGCGATCTGCCGCGCTTGTCGGTGACCGATGCCAG
CGGTGCGGAAGGCTACCTGGCCGACGTCAACAACTACAACGGTTGGCGCTATCACCTGGACAACAAGGACGACAACACCG
GCACCGAATTCGCCTGGCGTTCGGATATGGATCTGGCCTTCGATAGCGACTTCGTGCGCAGCTTCAAGGCCGGTGTGCGT
TACACCGACCGCGATGCCGAAACCAAGGGCAACATCTATCGCTTCATGTGCATCAACAATTGCGCGGGCGCACCGTTTTC
GCAGTACCCCGGCATCGGCGTGATGACCAATCCGATCACCGACTTCTTCCGCGGCGAGAGTCATGCCTTCGGGCCGACCC
TGACGGCATCCGATGCGGCAGTGGCGAACTATCAGCAGACCCTGGCTGCCTTCGGTGCCACCCCGCTGGAATTTGCGCCC
AACAACATCAACACGCAGAGCGAGAAGACCTACGCGGCGTATGGCGTACTGCGCTTCGGCGTGGATGGCGACATTCCGTT
CGATGGCAACATCGGGGTGCGCGTGGTGCGCACCGAAGTGGGCTCGCAGGGCGTACGCACCGGCACCGATGCCGAAGGTG
GCGGCCTGATTCCGGTGGATGCGCAGCAGACCTACACCGACGTGCTGCCCAGCTTGAATCTGCGTTGGATGCTCAGCGAT
CAGCTGCAGTGGCGGTTTGCCGCCTCGCGCGGTATTTCGCGCCCGACCTTCGACAAGCTCAACCCGAACCTGAGCCTGAG
CACCGGCACCTCGAACGGCGCTTCGACCTTCACCGGCACCGCGGGTAACCCGAGTCTGGAAGCGGTCAAGGCCGACCAGT
TCGACACCGCGCTGGAGTGGTACTTCGGCCAGGGGTCGATGATGTACGGCACCCTGTTCTACAAGAAGGTGGAAGGCTTC
ATCGCCAATGCCGTCTTCAACGAGGTGTACGACGGCCAGGTGTGGCAGATCACCCGTCCGGTCAATGGCGATTCGGGCAA
GATCCGCGGCGCCGAATTGGGTTACACGCAGTTCTTCGACTTCCTGCCGGGCTGGTTGAGCGGTTTCGGCCTGCAGACCA
ACTACACCTACGTCGACAGCGAAGCGCCGAGCCCGACCGCCACCGACACCAACGGCCAGTCGCTGACGGTGCCGCTGGAG
GGCCTGTCCAAGAACAGCTACAACGCGATCCTCAGCTACGAAACGGCGCGCTTCCAGGGCCGTGTGGCCTACAACTGGCG
CAGCGACTGGCTGGTGACCACTGCGGGCAACGGCACCGGCAACCTGCCGGTCTACAACAAGGGCTTCGGCCAGCTGGATG
CCTCGCTGCGTTTCAACATCAATGATGTGTGGTCGATTTCGCTCGATGGCGTGAACCTGCTCGATACCCGTCGCGAAAGC
TATCTGGGCACCGAGTCGCGCTACCGCGATTTCGTGATCAACGATCGTCGGTATGGCCTGACCTTGCGGGCCAGCCTGTA
G

Upstream 100 bases:

>100_bases
CTTGCCGTCGGCAGATGCCAAGCCAGCACAACGACGGGCAGGGCGCTCGCGCACCGGCCCGCTAAAAACTAGAAGTACAT
GCGTCCTGGGAGGGAGCACC

Downstream 100 bases:

>100_bases
AACGCGCCGTAGGAAGTGCGTCGCCGGTCCGGCGAGCTGTGCAGGCAGCTCGTTGGGCCGGTGTTTTTCCTATCGATGGC
CAGGCCATCGATCGCGAGGG

Product: TonB-dependent receptor

Products: NA

Alternate protein names: Nb-Dependent Receptor; NB-Dependent Outer Membrane Receptor; NB-Dependent Receptor Plug; NB-Dependent Receptor Subfamily; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB-Dependent Receptor Subfamily Protein; NB-Dependent Receptor-Like Protein; Outer Membrane Insertion C-Terminal Signal; NB Dependent Receptor-Related Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Receptor Protein; NB Dependent Receptor; NB-Dependent Maltose Outer Membrane Transporter MalA; NB Dependent Receptor For Iron Chelates; Outer Membrane Receptor Proteins Mostly Fe Transport-Like; 50S Ribosomal Protein L; NB-Dependent Outer Membrane Ferripyoverdine Receptor; DEAD/DEAH Box Helicase-Like; Nucleoside Diphosphate Kinase; Peptidase; NB Dependent Receptor Protein; 1-(5-Phosphoribosyl)-5-; Argininosuccinate Synthase; NB-Dependent Receptor Domain Protein

Number of amino acids: Translated: 906; Mature: 905

Protein sequence:

>906_residues
MSVQHRHVPAGRTVGQRSIRDFRRSVMAISVATLLSAQAYAQDATTTAAPASDATTQQLDTVQVTGTRSSVTKAQLVKQN
AEQIVDSIVAEDIGKLPDNNVAEALQRISGIQISRNYGEGSSIAIRGLTQVRTELNGRDIFTANDGRGLSFEDVSAELLG
GVNVYKNPSADMIEGGLGGTVDLRTRLPFDYDGRKIAGSVQYNYYDLADDGKPAFSGLFSDRWQTGIGEIGILVNYSQQK
SPFRQDTISIEPWYTQTDLPGYEGQGVSVPHGAGINTTVGERERKTGAFAMQWRPNDAVEVYTQVLRSDYDFSWHDYSFF
ALTGANPMQGLPGIQVNNRNEFVNGSFQNVPTESNTSLTERHSVTTDYSLGAKWTVNEKLTLSTDFQYVDATTTGTRYIL
STGQVTSPQFNVDFRGDLPRLSVTDASGAEGYLADVNNYNGWRYHLDNKDDNTGTEFAWRSDMDLAFDSDFVRSFKAGVR
YTDRDAETKGNIYRFMCINNCAGAPFSQYPGIGVMTNPITDFFRGESHAFGPTLTASDAAVANYQQTLAAFGATPLEFAP
NNINTQSEKTYAAYGVLRFGVDGDIPFDGNIGVRVVRTEVGSQGVRTGTDAEGGGLIPVDAQQTYTDVLPSLNLRWMLSD
QLQWRFAASRGISRPTFDKLNPNLSLSTGTSNGASTFTGTAGNPSLEAVKADQFDTALEWYFGQGSMMYGTLFYKKVEGF
IANAVFNEVYDGQVWQITRPVNGDSGKIRGAELGYTQFFDFLPGWLSGFGLQTNYTYVDSEAPSPTATDTNGQSLTVPLE
GLSKNSYNAILSYETARFQGRVAYNWRSDWLVTTAGNGTGNLPVYNKGFGQLDASLRFNINDVWSISLDGVNLLDTRRES
YLGTESRYRDFVINDRRYGLTLRASL

Sequences:

>Translated_906_residues
MSVQHRHVPAGRTVGQRSIRDFRRSVMAISVATLLSAQAYAQDATTTAAPASDATTQQLDTVQVTGTRSSVTKAQLVKQN
AEQIVDSIVAEDIGKLPDNNVAEALQRISGIQISRNYGEGSSIAIRGLTQVRTELNGRDIFTANDGRGLSFEDVSAELLG
GVNVYKNPSADMIEGGLGGTVDLRTRLPFDYDGRKIAGSVQYNYYDLADDGKPAFSGLFSDRWQTGIGEIGILVNYSQQK
SPFRQDTISIEPWYTQTDLPGYEGQGVSVPHGAGINTTVGERERKTGAFAMQWRPNDAVEVYTQVLRSDYDFSWHDYSFF
ALTGANPMQGLPGIQVNNRNEFVNGSFQNVPTESNTSLTERHSVTTDYSLGAKWTVNEKLTLSTDFQYVDATTTGTRYIL
STGQVTSPQFNVDFRGDLPRLSVTDASGAEGYLADVNNYNGWRYHLDNKDDNTGTEFAWRSDMDLAFDSDFVRSFKAGVR
YTDRDAETKGNIYRFMCINNCAGAPFSQYPGIGVMTNPITDFFRGESHAFGPTLTASDAAVANYQQTLAAFGATPLEFAP
NNINTQSEKTYAAYGVLRFGVDGDIPFDGNIGVRVVRTEVGSQGVRTGTDAEGGGLIPVDAQQTYTDVLPSLNLRWMLSD
QLQWRFAASRGISRPTFDKLNPNLSLSTGTSNGASTFTGTAGNPSLEAVKADQFDTALEWYFGQGSMMYGTLFYKKVEGF
IANAVFNEVYDGQVWQITRPVNGDSGKIRGAELGYTQFFDFLPGWLSGFGLQTNYTYVDSEAPSPTATDTNGQSLTVPLE
GLSKNSYNAILSYETARFQGRVAYNWRSDWLVTTAGNGTGNLPVYNKGFGQLDASLRFNINDVWSISLDGVNLLDTRRES
YLGTESRYRDFVINDRRYGLTLRASL
>Mature_905_residues
SVQHRHVPAGRTVGQRSIRDFRRSVMAISVATLLSAQAYAQDATTTAAPASDATTQQLDTVQVTGTRSSVTKAQLVKQNA
EQIVDSIVAEDIGKLPDNNVAEALQRISGIQISRNYGEGSSIAIRGLTQVRTELNGRDIFTANDGRGLSFEDVSAELLGG
VNVYKNPSADMIEGGLGGTVDLRTRLPFDYDGRKIAGSVQYNYYDLADDGKPAFSGLFSDRWQTGIGEIGILVNYSQQKS
PFRQDTISIEPWYTQTDLPGYEGQGVSVPHGAGINTTVGERERKTGAFAMQWRPNDAVEVYTQVLRSDYDFSWHDYSFFA
LTGANPMQGLPGIQVNNRNEFVNGSFQNVPTESNTSLTERHSVTTDYSLGAKWTVNEKLTLSTDFQYVDATTTGTRYILS
TGQVTSPQFNVDFRGDLPRLSVTDASGAEGYLADVNNYNGWRYHLDNKDDNTGTEFAWRSDMDLAFDSDFVRSFKAGVRY
TDRDAETKGNIYRFMCINNCAGAPFSQYPGIGVMTNPITDFFRGESHAFGPTLTASDAAVANYQQTLAAFGATPLEFAPN
NINTQSEKTYAAYGVLRFGVDGDIPFDGNIGVRVVRTEVGSQGVRTGTDAEGGGLIPVDAQQTYTDVLPSLNLRWMLSDQ
LQWRFAASRGISRPTFDKLNPNLSLSTGTSNGASTFTGTAGNPSLEAVKADQFDTALEWYFGQGSMMYGTLFYKKVEGFI
ANAVFNEVYDGQVWQITRPVNGDSGKIRGAELGYTQFFDFLPGWLSGFGLQTNYTYVDSEAPSPTATDTNGQSLTVPLEG
LSKNSYNAILSYETARFQGRVAYNWRSDWLVTTAGNGTGNLPVYNKGFGQLDASLRFNINDVWSISLDGVNLLDTRRESY
LGTESRYRDFVINDRRYGLTLRASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 99419; Mature: 99287

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQHRHVPAGRTVGQRSIRDFRRSVMAISVATLLSAQAYAQDATTTAAPASDATTQQLD
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCE
TVQVTGTRSSVTKAQLVKQNAEQIVDSIVAEDIGKLPDNNVAEALQRISGIQISRNYGEG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCC
SSIAIRGLTQVRTELNGRDIFTANDGRGLSFEDVSAELLGGVNVYKNPSADMIEGGLGGT
CCEEEECHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEECCCCHHHHCCCCCCE
VDLRTRLPFDYDGRKIAGSVQYNYYDLADDGKPAFSGLFSDRWQTGIGEIGILVNYSQQK
EEEEEECCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
SPFRQDTISIEPWYTQTDLPGYEGQGVSVPHGAGINTTVGERERKTGAFAMQWRPNDAVE
CCCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH
VYTQVLRSDYDFSWHDYSFFALTGANPMQGLPGIQVNNRNEFVNGSFQNVPTESNTSLTE
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
RHSVTTDYSLGAKWTVNEKLTLSTDFQYVDATTTGTRYILSTGQVTSPQFNVDFRGDLPR
HCCCCCCCCCCCEEEECCEEEEECCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCE
LSVTDASGAEGYLADVNNYNGWRYHLDNKDDNTGTEFAWRSDMDLAFDSDFVRSFKAGVR
EEEECCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEECCCCCCEECHHHHHHHHHCCE
YTDRDAETKGNIYRFMCINNCAGAPFSQYPGIGVMTNPITDFFRGESHAFGPTLTASDAA
ECCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCEECCCHHHHHCCCCCCCCCCCCCCCHH
VANYQQTLAAFGATPLEFAPNNINTQSEKTYAAYGVLRFGVDGDIPFDGNIGVRVVRTEV
HHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEC
GSQGVRTGTDAEGGGLIPVDAQQTYTDVLPSLNLRWMLSDQLQWRFAASRGISRPTFDKL
CCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEECCCCEEEEHHHCCCCCCCHHHC
NPNLSLSTGTSNGASTFTGTAGNPSLEAVKADQFDTALEWYFGQGSMMYGTLFYKKVEGF
CCCEEEECCCCCCCCEEECCCCCCCCEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHH
IANAVFNEVYDGQVWQITRPVNGDSGKIRGAELGYTQFFDFLPGWLSGFGLQTNYTYVDS
HHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECC
EAPSPTATDTNGQSLTVPLEGLSKNSYNAILSYETARFQGRVAYNWRSDWLVTTAGNGTG
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCEEEEEECCCEEEEECCCCCC
NLPVYNKGFGQLDASLRFNINDVWSISLDGVNLLDTRRESYLGTESRYRDFVINDRRYGL
CCCEEECCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHCCCHHHCCCEEECCCEEEE
TLRASL
EEEECC
>Mature Secondary Structure 
SVQHRHVPAGRTVGQRSIRDFRRSVMAISVATLLSAQAYAQDATTTAAPASDATTQQLD
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHCCE
TVQVTGTRSSVTKAQLVKQNAEQIVDSIVAEDIGKLPDNNVAEALQRISGIQISRNYGEG
EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCEEEEECCCCC
SSIAIRGLTQVRTELNGRDIFTANDGRGLSFEDVSAELLGGVNVYKNPSADMIEGGLGGT
CCEEEECHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCEEECCCCHHHHCCCCCCE
VDLRTRLPFDYDGRKIAGSVQYNYYDLADDGKPAFSGLFSDRWQTGIGEIGILVNYSQQK
EEEEEECCCCCCCCEEEEEEEEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEEECCCCC
SPFRQDTISIEPWYTQTDLPGYEGQGVSVPHGAGINTTVGERERKTGAFAMQWRPNDAVE
CCCCCCCEEECCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHH
VYTQVLRSDYDFSWHDYSFFALTGANPMQGLPGIQVNNRNEFVNGSFQNVPTESNTSLTE
HHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCHH
RHSVTTDYSLGAKWTVNEKLTLSTDFQYVDATTTGTRYILSTGQVTSPQFNVDFRGDLPR
HCCCCCCCCCCCEEEECCEEEEECCCEEEEECCCCCEEEEECCCCCCCEEEEEECCCCCE
LSVTDASGAEGYLADVNNYNGWRYHLDNKDDNTGTEFAWRSDMDLAFDSDFVRSFKAGVR
EEEECCCCCCCEEEECCCCCCEEEEECCCCCCCCCCEEECCCCCCEECHHHHHHHHHCCE
YTDRDAETKGNIYRFMCINNCAGAPFSQYPGIGVMTNPITDFFRGESHAFGPTLTASDAA
ECCCCCCCCCCEEEEEEECCCCCCCHHHCCCCCEECCCHHHHHCCCCCCCCCCCCCCCHH
VANYQQTLAAFGATPLEFAPNNINTQSEKTYAAYGVLRFGVDGDIPFDGNIGVRVVRTEV
HHHHHHHHHHHCCCCCEECCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEEEEC
GSQGVRTGTDAEGGGLIPVDAQQTYTDVLPSLNLRWMLSDQLQWRFAASRGISRPTFDKL
CCCCCCCCCCCCCCCEEEECCHHHHHHHCCCCCEEEEECCCCEEEEHHHCCCCCCCHHHC
NPNLSLSTGTSNGASTFTGTAGNPSLEAVKADQFDTALEWYFGQGSMMYGTLFYKKVEGF
CCCEEEECCCCCCCCEEECCCCCCCCEEEECCCCCCEEEEEECCCCEEEHHHHHHHHHHH
IANAVFNEVYDGQVWQITRPVNGDSGKIRGAELGYTQFFDFLPGWLSGFGLQTNYTYVDS
HHHHHHHHHCCCEEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECC
EAPSPTATDTNGQSLTVPLEGLSKNSYNAILSYETARFQGRVAYNWRSDWLVTTAGNGTG
CCCCCCCCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCEEEEEECCCEEEEECCCCCC
NLPVYNKGFGQLDASLRFNINDVWSISLDGVNLLDTRRESYLGTESRYRDFVINDRRYGL
CCCEEECCCCCCCCEEEECCCEEEEEEECCCCHHHHHHHHHCCCHHHCCCEEECCCEEEE
TLRASL
EEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA