| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is pyrG [H]
Identifier: 21242465
GI number: 21242465
Start: 1977450
End: 1979114
Strand: Direct
Name: pyrG [H]
Synonym: XAC1716
Alternate gene names: 21242465
Gene position: 1977450-1979114 (Clockwise)
Preceding gene: 21242464
Following gene: 21242466
Centisome position: 38.21
GC content: 63.78
Gene sequence:
>1665_bases ATGACCCCCCTGATTTTCGTTACCGGCGGCGTAGTGTCCTCGCTAGGCAAGGGCATTGCCGCCGCTTCGCTTGCGTCCAT TCTTGAAGCGCGTGGCCTGAAGGTCACGATGATGAAGCTGGACCCGTATATCAACGTAGACCCGGGCACGATGAGCCCGT TCCAGCATGGCGAGGTCTACGTCACCGACGACGGTGCCGAAACCGACCTGGATTTGGGCCACTACGAGCGTTATGTGCGC ACGCGCCTGTCGCGCAAGAACTCGGTGACCACCGGCCGCATCTACGAGAACGTCATCCGCAAGGAGCGTCGCGGCGATTA TCTGGGCGCCACCGTGCAGGTGATTCCGCATATCACCGACGAAATCCGTCGCTGCATCGACGAGGCCACGGCCGGGTTCG ATGTCGCGTTGATCGAAATCGGCGGCACCGTCGGCGACATCGAATCGCTGCCGTTCCTGGAGGCGATCCGCCAGGTGCGC ACCGAGCGCGGCGCCGAAAAGGCAATGTTCATGCATCTGACGCTGGTGCCGTACATCGCGGCAGCCGGCGAGTTGAAGAC CAAGCCGACCCAGCATTCGGTCAAGGAACTGCGCTCGATCGGCATCCAGCCGGACGTGCTGCTGTGCCGGTCCGAGCAGG CGGTGCCGGATTCGGAACGCCGCAAGATTGCGCTGTTCACCAATGTCTCCGAGCGTGCGGTGATCAGTTGCCCGGATATC GACGTGCTGTACGGCATGCCGCTGGAGTTGCTGCGCCAGGGACTGGACGAATTGGTCATCGACCAATTCAAGCTGCGCGA CAAGGTGGCTGCAGCGGATCTGTCGGAGTGGGCGGCCGTGGTGGACGCGGTCAAGCATCCGCTGGACGAGGTCAACATCG CCGTGGTCGGCAAGTACGTCGATCACCAGGATGCCTACAAGTCCGTGGCCGAAGCGCTGCGTCACGGCGGCCTGCGTCAG CGCACCAAGGTCAACCTGAAGTGGCTGGAAGCGCAGGATCTTGAGGGCAGCGACATGTCTGCCTTGCAGGACATCGACGG CATCCTGGTGCCGGGCGGTTTCGGCGATCGCGGTTTCGAAGGCAAGGTGCAGACCTCCAAGTTCGCGCGTGAGCAGAAGG TACCGTATTTCGGTATCTGCTACGGCATGCAGGCGGCCGTGGTGGACTATGCCCGCCACGTCGCCGACCTGGATGCGGCC AACAGCACCGAGAACGATCGCCAGTCGCCGCACCCGGTGATCGGCCTGATCACCGAATGGCGCACCGCCACCGGTGAAGT GGAAAAGCGCGACGAAAAATCCGACCTGGGCGGCACCATGCGCCTGGGCCTGCAGGAGCAACGCCTGAAGCCCGGCACGC TGGCGCGCGAGGTGTACGGCAAGGACGTTGTGGCCGAGCGGCATCGTCACCGTTACGAGTTCAACAACCGCTATCGCACC CAGCTGGAAGACGCCGGGCTGGTGATCTCCGGCAAGTCGATGGACGACACCCTGGTGGAAGTGGTGGAGCTGCCGCGCGA CACGCACCCGTGGTTCTTGGCCTGCCAGGCGCATCCGGAATTCCTGTCCACCCCGCGCGACGGCCATCCGCTGTTCATCG GCTTCGTGCGTGCGGCGCGCGAGAAGAAGGCCGGCGGGAAGTTGTTGAAGGAAGCGCGCGCGTGA
Upstream 100 bases:
>100_bases CATGCACTGTTTCAACGTGTGATGACCTTGTCGTCACGCAACCCTTGGGCATTCGCCCGTCACCCGCTAAACTATGGCTT TCCGGGAGGCTTCAAGCCCC
Downstream 100 bases:
>100_bases GCAGTCCCTTCTCCTGTCGGGAGAAGGTGGCGCGAAGCGCCGGATGAGGGGGCGCCGCAACGCACTGGAAGATGACAGCC ATGACGAGCGCGTCACCACG
Product: CTP synthetase
Products: NA
Alternate protein names: CTP synthetase; UTP--ammonia ligase [H]
Number of amino acids: Translated: 554; Mature: 553
Protein sequence:
>554_residues MTPLIFVTGGVVSSLGKGIAAASLASILEARGLKVTMMKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERYVR TRLSRKNSVTTGRIYENVIRKERRGDYLGATVQVIPHITDEIRRCIDEATAGFDVALIEIGGTVGDIESLPFLEAIRQVR TERGAEKAMFMHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDVLLCRSEQAVPDSERRKIALFTNVSERAVISCPDI DVLYGMPLELLRQGLDELVIDQFKLRDKVAAADLSEWAAVVDAVKHPLDEVNIAVVGKYVDHQDAYKSVAEALRHGGLRQ RTKVNLKWLEAQDLEGSDMSALQDIDGILVPGGFGDRGFEGKVQTSKFAREQKVPYFGICYGMQAAVVDYARHVADLDAA NSTENDRQSPHPVIGLITEWRTATGEVEKRDEKSDLGGTMRLGLQEQRLKPGTLAREVYGKDVVAERHRHRYEFNNRYRT QLEDAGLVISGKSMDDTLVEVVELPRDTHPWFLACQAHPEFLSTPRDGHPLFIGFVRAAREKKAGGKLLKEARA
Sequences:
>Translated_554_residues MTPLIFVTGGVVSSLGKGIAAASLASILEARGLKVTMMKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERYVR TRLSRKNSVTTGRIYENVIRKERRGDYLGATVQVIPHITDEIRRCIDEATAGFDVALIEIGGTVGDIESLPFLEAIRQVR TERGAEKAMFMHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDVLLCRSEQAVPDSERRKIALFTNVSERAVISCPDI DVLYGMPLELLRQGLDELVIDQFKLRDKVAAADLSEWAAVVDAVKHPLDEVNIAVVGKYVDHQDAYKSVAEALRHGGLRQ RTKVNLKWLEAQDLEGSDMSALQDIDGILVPGGFGDRGFEGKVQTSKFAREQKVPYFGICYGMQAAVVDYARHVADLDAA NSTENDRQSPHPVIGLITEWRTATGEVEKRDEKSDLGGTMRLGLQEQRLKPGTLAREVYGKDVVAERHRHRYEFNNRYRT QLEDAGLVISGKSMDDTLVEVVELPRDTHPWFLACQAHPEFLSTPRDGHPLFIGFVRAAREKKAGGKLLKEARA >Mature_553_residues TPLIFVTGGVVSSLGKGIAAASLASILEARGLKVTMMKLDPYINVDPGTMSPFQHGEVYVTDDGAETDLDLGHYERYVRT RLSRKNSVTTGRIYENVIRKERRGDYLGATVQVIPHITDEIRRCIDEATAGFDVALIEIGGTVGDIESLPFLEAIRQVRT ERGAEKAMFMHLTLVPYIAAAGELKTKPTQHSVKELRSIGIQPDVLLCRSEQAVPDSERRKIALFTNVSERAVISCPDID VLYGMPLELLRQGLDELVIDQFKLRDKVAAADLSEWAAVVDAVKHPLDEVNIAVVGKYVDHQDAYKSVAEALRHGGLRQR TKVNLKWLEAQDLEGSDMSALQDIDGILVPGGFGDRGFEGKVQTSKFAREQKVPYFGICYGMQAAVVDYARHVADLDAAN STENDRQSPHPVIGLITEWRTATGEVEKRDEKSDLGGTMRLGLQEQRLKPGTLAREVYGKDVVAERHRHRYEFNNRYRTQ LEDAGLVISGKSMDDTLVEVVELPRDTHPWFLACQAHPEFLSTPRDGHPLFIGFVRAAREKKAGGKLLKEARA
Specific function: Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen [H]
COG id: COG0504
COG function: function code F; CTP synthase (UTP-ammonia lyase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]
Homologues:
Organism=Homo sapiens, GI148491070, Length=561, Percent_Identity=42.9590017825312, Blast_Score=446, Evalue=1e-125, Organism=Homo sapiens, GI28559085, Length=561, Percent_Identity=41.1764705882353, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI28559083, Length=561, Percent_Identity=41.1764705882353, Blast_Score=432, Evalue=1e-121, Organism=Homo sapiens, GI221316689, Length=561, Percent_Identity=41.1764705882353, Blast_Score=432, Evalue=1e-121, Organism=Escherichia coli, GI1789142, Length=540, Percent_Identity=64.4444444444444, Blast_Score=704, Evalue=0.0, Organism=Caenorhabditis elegans, GI25148299, Length=605, Percent_Identity=36.0330578512397, Blast_Score=389, Evalue=1e-108, Organism=Saccharomyces cerevisiae, GI6319432, Length=570, Percent_Identity=40.3508771929825, Blast_Score=419, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6322563, Length=566, Percent_Identity=40.9893992932862, Blast_Score=418, Evalue=1e-117, Organism=Drosophila melanogaster, GI24664469, Length=560, Percent_Identity=42.3214285714286, Blast_Score=440, Evalue=1e-123, Organism=Drosophila melanogaster, GI21357815, Length=504, Percent_Identity=41.0714285714286, Blast_Score=371, Evalue=1e-103,
Paralogues:
None
Copy number: 480 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004468 - InterPro: IPR017456 - InterPro: IPR017926 - InterPro: IPR000991 [H]
Pfam domain/function: PF06418 CTP_synth_N; PF00117 GATase [H]
EC number: =6.3.4.2 [H]
Molecular weight: Translated: 61483; Mature: 61352
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00442 GATASE_TYPE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPLIFVTGGVVSSLGKGIAAASLASILEARGLKVTMMKLDPYINVDPGTMSPFQHGEVY CCCEEEECCHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERYVRTRLSRKNSVTTGRIYENVIRKERRGDYLGATVQVIPHITD EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EIRRCIDEATAGFDVALIEIGGTVGDIESLPFLEAIRQVRTERGAEKAMFMHLTLVPYIA HHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAGELKTKPTQHSVKELRSIGIQPDVLLCRSEQAVPDSERRKIALFTNVSERAVISCPDI HCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCC DVLYGMPLELLRQGLDELVIDQFKLRDKVAAADLSEWAAVVDAVKHPLDEVNIAVVGKYV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEHH DHQDAYKSVAEALRHGGLRQRTKVNLKWLEAQDLEGSDMSALQDIDGILVPGGFGDRGFE CHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEECCCCCCCCCC GKVQTSKFAREQKVPYFGICYGMQAAVVDYARHVADLDAANSTENDRQSPHPVIGLITEW CCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC RTATGEVEKRDEKSDLGGTMRLGLQEQRLKPGTLAREVYGKDVVAERHRHRYEFNNRYRT CCCCCCHHHCCCHHCCCCEEECCCHHHCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCHHH QLEDAGLVISGKSMDDTLVEVVELPRDTHPWFLACQAHPEFLSTPRDGHPLFIGFVRAAR HHCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCEEHHHHHHHH EKKAGGKLLKEARA HHHHHHHHHHHHCC >Mature Secondary Structure TPLIFVTGGVVSSLGKGIAAASLASILEARGLKVTMMKLDPYINVDPGTMSPFQHGEVY CCEEEECCHHHHHHCCHHHHHHHHHHHHHCCCEEEEEEECCEEECCCCCCCCCCCCEEE VTDDGAETDLDLGHYERYVRTRLSRKNSVTTGRIYENVIRKERRGDYLGATVQVIPHITD EECCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH EIRRCIDEATAGFDVALIEIGGTVGDIESLPFLEAIRQVRTERGAEKAMFMHLTLVPYIA HHHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH AAGELKTKPTQHSVKELRSIGIQPDVLLCRSEQAVPDSERRKIALFTNVSERAVISCPDI HCCCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCEEEECCCC DVLYGMPLELLRQGLDELVIDQFKLRDKVAAADLSEWAAVVDAVKHPLDEVNIAVVGKYV HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCEEEEEEHH DHQDAYKSVAEALRHGGLRQRTKVNLKWLEAQDLEGSDMSALQDIDGILVPGGFGDRGFE CHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCHHHHHHCCCEEECCCCCCCCCC GKVQTSKFAREQKVPYFGICYGMQAAVVDYARHVADLDAANSTENDRQSPHPVIGLITEW CCCHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECC RTATGEVEKRDEKSDLGGTMRLGLQEQRLKPGTLAREVYGKDVVAERHRHRYEFNNRYRT CCCCCCHHHCCCHHCCCCEEECCCHHHCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCHHH QLEDAGLVISGKSMDDTLVEVVELPRDTHPWFLACQAHPEFLSTPRDGHPLFIGFVRAAR HHCCCCEEEECCCCHHHHHHHHHCCCCCCCEEEEEECCHHHHCCCCCCCCEEHHHHHHHH EKKAGGKLLKEARA HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA