| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242438
Identifier: 21242438
GI number: 21242438
Start: 1945501
End: 1946454
Strand: Direct
Name: 21242438
Synonym: XAC1689
Alternate gene names: NA
Gene position: 1945501-1946454 (Clockwise)
Preceding gene: 21242437
Following gene: 21242439
Centisome position: 37.59
GC content: 65.93
Gene sequence:
>954_bases GTGTTCGCCTGGAACAAACGCGGACTGGTGTTCGACGTCGCGCGCCATGGGGTGGGCGGCTGGATGCACCATGCCGCGCT GACGCCAACACCGCATCGCCTGTCTGCTCAGGTGCTGCGGGTGTACGCCGGCTTTCGCGATGCGCAGGGCGTGAGCCGGA TCGGCTACGTGGATGTGCGCGCCGATGCGCCAACGCAGATCGTCGGCGTCAGCAAGCAGCCGGTGCTCGACATTGGCCGT GACGGTTGTTTCGACGACAACGGCATGATCCTGGGCGATGTGGTGGCCGGGCCGGACGGGCTATACCTGTTCTATGTCGG CTTCCAGCGCGTGGCCAAGGCCAAGTTCCTCGCCTTCACCGGCCTGGCGGTCTCCCACGATGGTGGCGAGCGCTTCCAGC GTCGGCAGGAAACGCCGCTGCTGGATCGCGCACCGGGGCGCAGCACGATTGCGGCGGTGCATTCGGCACGCTACGAACAG GGCCGCTGGCGGCTCTGGTACGCAGTGGGCGACGACTGGGAAACGATCGGCGGCCAGCCGTATCCGCGTTACCACATCCG CTACGCCCAGACCGACGACCTGCATTGCATCCCCACCGACGATGCTGTGTGCCTGCTTCCACGCGGCGACGAGTACCGCA TCGGGCGTCCGCGCGTGTACCGGCTCGGCGAGCGCTATGTGATGTATTTCACCCGTGGCGACCTCCAGGGCGGCTACTTT CCCGGCATCGCCTTCAGTGGCGATGGGGTGCACTGGGAACGCGACGACCGTCAGTTGGGGCTTGCGTTATCCGATGACGG CTGGGATGCGCAAGTGCTGTGCTACCCCGCCTTGATCCAGCACGGCGAGCGTGTGTTGATGTTCTACAACGGCAACGCGA TGGGGCAGGCGGGCTTCGGCCTGGCAGAGGCGGCGTTGCCGGTTGCGTTACAGGGCTGCCATGTTTTCGGTTAG
Upstream 100 bases:
>100_bases CGCGCTGGTGACGCGACATACCGAAGCCGAGCGTGTGTACGTGGGCTCGCCGGCACGCGCGGTGGCGGGCAGATCCAGCT TCGATGTGGAGCTTTGAGCG
Downstream 100 bases:
>100_bases GTCCTACGTGCCGGCCGATGCGCCTGCGTGGGATGCCCTGGTGGTGGCGTCGCGCAATGGCAATCTGCTGCATCGGCGTG ACTATATGGACTATCACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 317; Mature: 317
Protein sequence:
>317_residues MFAWNKRGLVFDVARHGVGGWMHHAALTPTPHRLSAQVLRVYAGFRDAQGVSRIGYVDVRADAPTQIVGVSKQPVLDIGR DGCFDDNGMILGDVVAGPDGLYLFYVGFQRVAKAKFLAFTGLAVSHDGGERFQRRQETPLLDRAPGRSTIAAVHSARYEQ GRWRLWYAVGDDWETIGGQPYPRYHIRYAQTDDLHCIPTDDAVCLLPRGDEYRIGRPRVYRLGERYVMYFTRGDLQGGYF PGIAFSGDGVHWERDDRQLGLALSDDGWDAQVLCYPALIQHGERVLMFYNGNAMGQAGFGLAEAALPVALQGCHVFG
Sequences:
>Translated_317_residues MFAWNKRGLVFDVARHGVGGWMHHAALTPTPHRLSAQVLRVYAGFRDAQGVSRIGYVDVRADAPTQIVGVSKQPVLDIGR DGCFDDNGMILGDVVAGPDGLYLFYVGFQRVAKAKFLAFTGLAVSHDGGERFQRRQETPLLDRAPGRSTIAAVHSARYEQ GRWRLWYAVGDDWETIGGQPYPRYHIRYAQTDDLHCIPTDDAVCLLPRGDEYRIGRPRVYRLGERYVMYFTRGDLQGGYF PGIAFSGDGVHWERDDRQLGLALSDDGWDAQVLCYPALIQHGERVLMFYNGNAMGQAGFGLAEAALPVALQGCHVFG >Mature_317_residues MFAWNKRGLVFDVARHGVGGWMHHAALTPTPHRLSAQVLRVYAGFRDAQGVSRIGYVDVRADAPTQIVGVSKQPVLDIGR DGCFDDNGMILGDVVAGPDGLYLFYVGFQRVAKAKFLAFTGLAVSHDGGERFQRRQETPLLDRAPGRSTIAAVHSARYEQ GRWRLWYAVGDDWETIGGQPYPRYHIRYAQTDDLHCIPTDDAVCLLPRGDEYRIGRPRVYRLGERYVMYFTRGDLQGGYF PGIAFSGDGVHWERDDRQLGLALSDDGWDAQVLCYPALIQHGERVLMFYNGNAMGQAGFGLAEAALPVALQGCHVFG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35239; Mature: 35239
Theoretical pI: Translated: 7.10; Mature: 7.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAWNKRGLVFDVARHGVGGWMHHAALTPTPHRLSAQVLRVYAGFRDAQGVSRIGYVDVR CCEECCCCCEEEHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEE ADAPTQIVGVSKQPVLDIGRDGCFDDNGMILGDVVAGPDGLYLFYVGFQRVAKAKFLAFT CCCCCEEEECCCCCCEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHEEEEE GLAVSHDGGERFQRRQETPLLDRAPGRSTIAAVHSARYEQGRWRLWYAVGDDWETIGGQP EEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCC YPRYHIRYAQTDDLHCIPTDDAVCLLPRGDEYRIGRPRVYRLGERYVMYFTRGDLQGGYF CCCEEEEEECCCCEEEEECCCCEEEEECCCCEECCCCCEEEECCEEEEEEEECCCCCCCC PGIAFSGDGVHWERDDRQLGLALSDDGWDAQVLCYPALIQHGERVLMFYNGNAMGQAGFG CCEEECCCCCEEECCCCEEEEEECCCCCCEEEEEEHHHHHCCCEEEEEECCCCCCCCCCC LAEAALPVALQGCHVFG HHHHHHHHEEECEEECC >Mature Secondary Structure MFAWNKRGLVFDVARHGVGGWMHHAALTPTPHRLSAQVLRVYAGFRDAQGVSRIGYVDVR CCEECCCCCEEEHHHCCCCCHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEE ADAPTQIVGVSKQPVLDIGRDGCFDDNGMILGDVVAGPDGLYLFYVGFQRVAKAKFLAFT CCCCCEEEECCCCCCEECCCCCCCCCCCEEEEEEEECCCCEEEEEEEHHHHHHHHEEEEE GLAVSHDGGERFQRRQETPLLDRAPGRSTIAAVHSARYEQGRWRLWYAVGDDWETIGGQP EEEEECCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCHHHCCCCC YPRYHIRYAQTDDLHCIPTDDAVCLLPRGDEYRIGRPRVYRLGERYVMYFTRGDLQGGYF CCCEEEEEECCCCEEEEECCCCEEEEECCCCEECCCCCEEEECCEEEEEEEECCCCCCCC PGIAFSGDGVHWERDDRQLGLALSDDGWDAQVLCYPALIQHGERVLMFYNGNAMGQAGFG CCEEECCCCCEEECCCCEEEEEECCCCCCEEEEEEHHHHHCCCEEEEEECCCCCCCCCCC LAEAALPVALQGCHVFG HHHHHHHHEEECEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]