| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242395
Identifier: 21242395
GI number: 21242395
Start: 1896648
End: 1897457
Strand: Direct
Name: 21242395
Synonym: XAC1645
Alternate gene names: NA
Gene position: 1896648-1897457 (Clockwise)
Preceding gene: 77748599
Following gene: 21242398
Centisome position: 36.65
GC content: 68.89
Gene sequence:
>810_bases GTGCGCGACCTGCAAGTTCACTTCACCCACCGGCAGCAGCCGGATCATTCCCTCAAGCCCGGCGTCCACCGGATCGTCCG TCATGCCTCCGGCAGCGTGCGGGTGGTCGGCGATGCGCAGGGCGCATTGCTGTTGGCGCAGTTCTGCCTGGACCAACGCG GCCTGTGGCTGCAGGTCGCCAACGGAATCCGCGGTATCCACGTCAATGGGCGCCCGGTGCGCCGCATGGCGCTGCTGCGT GCGGGCGATGCGATCTATGCCGATGGCGTGGAAATGCTGTTGCGCAGTGCCCCGTCCAGTGCGCCGGCCAACGATACCCA AGACGACACGGCCAGCCTCGGCGAGGTCTGCCTGCTGTTGCGCGGCATCGGCGGGCGTCATCACGGTCGCAGTTTCACCC TGGATCGCGCGCGTCTGGTCGGCAGCGATGCCGCCGCCGATATCGTCATCGACGACCCGGCATTCGCGGCGCAGCATGCG CGCCTGGAACGGCACGGCGACCGTGTGCTGATCCGCGATCTGGGTTCGGAAGAGGGGAGCTGGATCAATGGCGTCCAGGT GCGCGACGGCTGGCTGCAGGCGGGCGATCAGGTCGTCTTCGATGCGCGCCACCGCTTCGTGGTGGAAGTGCCGCGGACGC ACCACAGCACCACCTGGGATCTGCCCGATACCGAACCCCTGCCGCCGCCGAGCGCCGTTGCAGAGCCGACGCGCGCACCG GTGAAGGTGGCACGCTGGCCCTGGTTGCTGCTCAGCGCGGCGTTGCTGGCGGCGGCGTTGAGCGCCTTGCTGTGGTTTGG CGCGCGCTGA
Upstream 100 bases:
>100_bases CTGCCGCCGCGGCGCCTGCTCAGCCGACGGCAGCGCGCCAGCACGCTCCGATCACTCCTGGATGGCCGCGCATGGGGGCA AACCTGCTAGGCTGCGGCGG
Downstream 100 bases:
>100_bases GTTTTTTCCAGACGCGCCAGCCCAGCAACACCGCAAGAATGCCGGCGTACAAGGCCGGCTCGCGGATATCGGATTTCACC AGCCACCAGAAATGCAGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 269; Mature: 269
Protein sequence:
>269_residues MRDLQVHFTHRQQPDHSLKPGVHRIVRHASGSVRVVGDAQGALLLAQFCLDQRGLWLQVANGIRGIHVNGRPVRRMALLR AGDAIYADGVEMLLRSAPSSAPANDTQDDTASLGEVCLLLRGIGGRHHGRSFTLDRARLVGSDAAADIVIDDPAFAAQHA RLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQAGDQVVFDARHRFVVEVPRTHHSTTWDLPDTEPLPPPSAVAEPTRAP VKVARWPWLLLSAALLAAALSALLWFGAR
Sequences:
>Translated_269_residues MRDLQVHFTHRQQPDHSLKPGVHRIVRHASGSVRVVGDAQGALLLAQFCLDQRGLWLQVANGIRGIHVNGRPVRRMALLR AGDAIYADGVEMLLRSAPSSAPANDTQDDTASLGEVCLLLRGIGGRHHGRSFTLDRARLVGSDAAADIVIDDPAFAAQHA RLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQAGDQVVFDARHRFVVEVPRTHHSTTWDLPDTEPLPPPSAVAEPTRAP VKVARWPWLLLSAALLAAALSALLWFGAR >Mature_269_residues MRDLQVHFTHRQQPDHSLKPGVHRIVRHASGSVRVVGDAQGALLLAQFCLDQRGLWLQVANGIRGIHVNGRPVRRMALLR AGDAIYADGVEMLLRSAPSSAPANDTQDDTASLGEVCLLLRGIGGRHHGRSFTLDRARLVGSDAAADIVIDDPAFAAQHA RLERHGDRVLIRDLGSEEGSWINGVQVRDGWLQAGDQVVFDARHRFVVEVPRTHHSTTWDLPDTEPLPPPSAVAEPTRAP VKVARWPWLLLSAALLAAALSALLWFGAR
Specific function: Unknown
COG id: COG1716
COG function: function code T; FOG: FHA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29392; Mature: 29392
Theoretical pI: Translated: 8.34; Mature: 8.34
Prosite motif: PS50006 FHA_DOMAIN ; PS00228 TUBULIN_B_AUTOREG
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDLQVHFTHRQQPDHSLKPGVHRIVRHASGSVRVVGDAQGALLLAQFCLDQRGLWLQVA CCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEC NGIRGIHVNGRPVRRMALLRAGDAIYADGVEMLLRSAPSSAPANDTQDDTASLGEVCLLL CCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH RGIGGRHHGRSFTLDRARLVGSDAAADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGS HCCCCCCCCCCEEHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCC WINGVQVRDGWLQAGDQVVFDARHRFVVEVPRTHHSTTWDLPDTEPLPPPSAVAEPTRAP EECCEEEECHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCC VKVARWPWLLLSAALLAAALSALLWFGAR EEHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRDLQVHFTHRQQPDHSLKPGVHRIVRHASGSVRVVGDAQGALLLAQFCLDQRGLWLQVA CCCEEEEEECCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHCCCCCEEEEC NGIRGIHVNGRPVRRMALLRAGDAIYADGVEMLLRSAPSSAPANDTQDDTASLGEVCLLL CCEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHH RGIGGRHHGRSFTLDRARLVGSDAAADIVIDDPAFAAQHARLERHGDRVLIRDLGSEEGS HCCCCCCCCCCEEHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHCCCEEEEEECCCCCCC WINGVQVRDGWLQAGDQVVFDARHRFVVEVPRTHHSTTWDLPDTEPLPPPSAVAEPTRAP EECCEEEECHHHHCCCEEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHCCCCCCC VKVARWPWLLLSAALLAAALSALLWFGAR EEHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA