Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21242322

Identifier: 21242322

GI number: 21242322

Start: 1818051

End: 1818539

Strand: Direct

Name: 21242322

Synonym: XAC1572

Alternate gene names: NA

Gene position: 1818051-1818539 (Clockwise)

Preceding gene: 77748595

Following gene: 21242330

Centisome position: 35.13

GC content: 64.01

Gene sequence:

>489_bases
GTGAGCAAGCGCTTAGTGCCCAGCGACGACGCTGGTGATGAGCCCGGTGGCCACTGCGATCAGCACGTACGTGTTATCCA
CGCGACGCCATTCGTGTCCACGCGGCGGCGGCTTGAGATGGTGCTTGTGGTAGTCGGCAACGCGGCTGCCACGATGGTCC
GGCGCCAGCCGCTCGCCGCGACGATACGGCGGGCCGCGCCGGTCGTTGCGGTGATCGCCGTGATCCGCCTTGCGGCGATC
GTCGCGCCTGTCGTCATGCCTCTCGTCGCGATGGTCGTCATGGCGGTCAGGGCCATGGTCGTCGTGATGCTGCGCGTTGC
GGTCACGGTCGTGATCGAGGTCGTGCTGCTGCGGCGCTGCAAACGCTGCGCCAGAGGTCAGCAGCGTCAAGGCCATGAAA
GATCCAACGAAGCGTTTCATCAGCGGACTCCTGGGTCACAGGAAATGCCTGTGCACCTGCACGGTAGAAGTTTCAAGCTG
AATACGTAA

Upstream 100 bases:

>100_bases
TCGAACCGGGCGGCTGTGGACCATATGCGTCGGTCGCCCCCACACCAAATAGGAGAAGCCCGATCCGCGTTGCCACGGAC
CGGGCCTCACTGACGACACG

Downstream 100 bases:

>100_bases
TGAGAAGGCGTTCCGGCGCCTCACGGCAGCGCTGCCGGGGTCTAGACGACGCCGGTACTGCTGGTGTCGTCGCGCTTCAC
GCGCGGAGGCAAGGGTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 161

Protein sequence:

>162_residues
MSKRLVPSDDAGDEPGGHCDQHVRVIHATPFVSTRRRLEMVLVVVGNAAATMVRRQPLAATIRRAAPVVAVIAVIRLAAI
VAPVVMPLVAMVVMAVRAMVVVMLRVAVTVVIEVVLLRRCKRCARGQQRQGHERSNEAFHQRTPGSQEMPVHLHGRSFKL
NT

Sequences:

>Translated_162_residues
MSKRLVPSDDAGDEPGGHCDQHVRVIHATPFVSTRRRLEMVLVVVGNAAATMVRRQPLAATIRRAAPVVAVIAVIRLAAI
VAPVVMPLVAMVVMAVRAMVVVMLRVAVTVVIEVVLLRRCKRCARGQQRQGHERSNEAFHQRTPGSQEMPVHLHGRSFKL
NT
>Mature_161_residues
SKRLVPSDDAGDEPGGHCDQHVRVIHATPFVSTRRRLEMVLVVVGNAAATMVRRQPLAATIRRAAPVVAVIAVIRLAAIV
APVVMPLVAMVVMAVRAMVVVMLRVAVTVVIEVVLLRRCKRCARGQQRQGHERSNEAFHQRTPGSQEMPVHLHGRSFKLN
T

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17773; Mature: 17641

Theoretical pI: Translated: 12.15; Mature: 12.15

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
7.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKRLVPSDDAGDEPGGHCDQHVRVIHATPFVSTRRRLEMVLVVVGNAAATMVRRQPLAA
CCCCCCCCCCCCCCCCCCHHHHEEHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TIRRAAPVVAVIAVIRLAAIVAPVVMPLVAMVVMAVRAMVVVMLRVAVTVVIEVVLLRRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRCARGQQRQGHERSNEAFHQRTPGSQEMPVHLHGRSFKLNT
HHHHCCHHHCCCCHHHHHHHHCCCCCCCCCEEECCCEEECCC
>Mature Secondary Structure 
SKRLVPSDDAGDEPGGHCDQHVRVIHATPFVSTRRRLEMVLVVVGNAAATMVRRQPLAA
CCCCCCCCCCCCCCCCCHHHHEEHEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
TIRRAAPVVAVIAVIRLAAIVAPVVMPLVAMVVMAVRAMVVVMLRVAVTVVIEVVLLRRC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRCARGQQRQGHERSNEAFHQRTPGSQEMPVHLHGRSFKLNT
HHHHCCHHHCCCCHHHHHHHHCCCCCCCCCEEECCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA