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The map label for this gene is acvB

Identifier: 21242121

GI number: 21242121

Start: 1574857

End: 1576230

Strand: Direct

Name: acvB

Synonym: XAC1368

Alternate gene names: NA

Gene position: 1574857-1576230 (Clockwise)

Preceding gene: 77748580

Following gene: 21242123

Centisome position: 30.43

GC content: 67.83

Gene sequence:

>1374_bases
ATGCGACGACTTGAAATGTGGAGCGCGCTCTGCGGCGCGGCGATGTTGACGCTGTCGGGCATGGCTGCCGCGCAGGCGCC
GGAACCGGTCAGCCACGGCCGTTTCGAGCAGGTGCCGGTGCTGATGCCCAAGGGTGAGCCGCAACGGGTGGTGATCTGGC
TGGCCGGTGCGGGCAATGCCGCCACGCGCCAGGCCCAGGCAGAAAGCCTGCGCGCCGACGGTGCGATGGTGGCGGTGGTG
GACACCGCGCACCTGTACGCCGTGCTGCGCAAAGCCGGCGGCACCTGCACGTTCTCGGTCGGCGATGTGGAAAATTTTTC
GCGCTACGTGCAGGCCTTCTATCACATCCCTACCTACCGTCTGCCGCTGCTGGTGGGCGATGGCGAGGGCGCCGCGTTGG
CCTACGCGATCGCGGCCCAAGCCAAGCCGCATGTATTGGCCGGCGTGCTGACCGACGGGCTCTGCCCAGCCACCGTGTCC
AACCAGGCGATCTGCCAGCCGGGTGTGCGCCCGGGGACCAACACGCTGTTGCCGGTGCCATTGCAGATTCCCTGGGTGCT
TGCGGCCAGCCAGGACAAACGCTGTCCGGCGGCCGCCGAGGAGGGCTTCCTCAAGCAGGTGCCGCAGGCGCGCACCTTCC
GGCGCTCAGCGCAAGGCGACATCCTGCCCGGCCTGCGTGCCGCGGTCCGTTCGCTGGGCGAGCAGAAGGGCGTGGCGTTG
CCGCCGCCGCCCGGCGGTCTGGCGGATCTGCCGGTGGTGGAGCTGCCGGCCAAGCCGGACGGCGACAGCGACGACGACAC
GTTCGTGATCTTCGTTTCTGGCGATGGCGGTTGGGCCGGGCTGGACGAAGAAGTGGCCGACGCACTCGCCGCGCAAGGCA
TTCCGGTCGTTGGCCTGGATTCGCTGCGTTACTTCTGGACCGAGCGCACGCCGCAAGGTTTTGCCGACGACCTGGATCGC
ATCGCCCGCATCTATGCGCAGCGCTGGGATCGTCAGCGCGTGGTATTGATCGGGTTTTCGCAGGGTGCCGACGTGCTGCC
GGCCGCCATCAACAAACTGCCGGCGGCGACCAAGCAGAACCTGCGCATGACGGCGCTGTTGTCGGTCGGCAAGCTGGCCG
ACTACGAATTCCACGTCAGCAACTGGCTGGGCTCGGATGACGAGGGCCTGCCGATCGCACCGGAAGTTCAGCGTCTGCCG
GCCGGCACGACGGTGTGCATCTACGGCCAGGACGACGACGATGCGCTGTGCCCAAGCCTGCCCGCAAACGTGGCCAGGCG
GGTCGCACTGCCGGGCGATCACCACTTCAAGGGCGATTACGCGACCCTGGCCAAGACGATCATGGACCAGTTGCACGCGC
TGTCGAAGCCGTAA

Upstream 100 bases:

>100_bases
GCCGGCGGTCAGCCGCCCCGACGCGCAATGAGCACGGTCCTGCGCTTCGCGCTGCAGTCCGGAACGACTATCTTTGAACC
ACTTTTCCCGATGGTGCGAC

Downstream 100 bases:

>100_bases
GGCCGGACATCGTTTGATCTGATGGCGCCGACCTTGGTCTTGGTCGGTTGCGCGGTGCCGCCTCCGGTTTCGGGGCAGGC
TGTAACTCCATCCCTGGAAG

Product: virulence protein

Products: NA

Alternate protein names: Virulence Protein; Type IV Secretory Pathway VirJ Component-Like Protein; Acid lerance Protein; Type IV Secretion System VirJ-Like Protein; AcvB-Related Protein; Acid Virulence Protein B; Type IV Secretory Pathway Virj Component-Related Protein; Virj-Like Protein; Glycosyl Transferase/Polysaccharide Deacetylase; Type IV Secretory Pathway VirJ Component; Virulance And Acid lerance Protein; Type IV Secretion System Virj-Like Protein; Virulence Factor; Chromosomal Virulence Protein B

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MRRLEMWSALCGAAMLTLSGMAAAQAPEPVSHGRFEQVPVLMPKGEPQRVVIWLAGAGNAATRQAQAESLRADGAMVAVV
DTAHLYAVLRKAGGTCTFSVGDVENFSRYVQAFYHIPTYRLPLLVGDGEGAALAYAIAAQAKPHVLAGVLTDGLCPATVS
NQAICQPGVRPGTNTLLPVPLQIPWVLAASQDKRCPAAAEEGFLKQVPQARTFRRSAQGDILPGLRAAVRSLGEQKGVAL
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADALAAQGIPVVGLDSLRYFWTERTPQGFADDLDR
IARIYAQRWDRQRVVLIGFSQGADVLPAAINKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP
AGTTVCIYGQDDDDALCPSLPANVARRVALPGDHHFKGDYATLAKTIMDQLHALSKP

Sequences:

>Translated_457_residues
MRRLEMWSALCGAAMLTLSGMAAAQAPEPVSHGRFEQVPVLMPKGEPQRVVIWLAGAGNAATRQAQAESLRADGAMVAVV
DTAHLYAVLRKAGGTCTFSVGDVENFSRYVQAFYHIPTYRLPLLVGDGEGAALAYAIAAQAKPHVLAGVLTDGLCPATVS
NQAICQPGVRPGTNTLLPVPLQIPWVLAASQDKRCPAAAEEGFLKQVPQARTFRRSAQGDILPGLRAAVRSLGEQKGVAL
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADALAAQGIPVVGLDSLRYFWTERTPQGFADDLDR
IARIYAQRWDRQRVVLIGFSQGADVLPAAINKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP
AGTTVCIYGQDDDDALCPSLPANVARRVALPGDHHFKGDYATLAKTIMDQLHALSKP
>Mature_457_residues
MRRLEMWSALCGAAMLTLSGMAAAQAPEPVSHGRFEQVPVLMPKGEPQRVVIWLAGAGNAATRQAQAESLRADGAMVAVV
DTAHLYAVLRKAGGTCTFSVGDVENFSRYVQAFYHIPTYRLPLLVGDGEGAALAYAIAAQAKPHVLAGVLTDGLCPATVS
NQAICQPGVRPGTNTLLPVPLQIPWVLAASQDKRCPAAAEEGFLKQVPQARTFRRSAQGDILPGLRAAVRSLGEQKGVAL
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADALAAQGIPVVGLDSLRYFWTERTPQGFADDLDR
IARIYAQRWDRQRVVLIGFSQGADVLPAAINKLPAATKQNLRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLP
AGTTVCIYGQDDDDALCPSLPANVARRVALPGDHHFKGDYATLAKTIMDQLHALSKP

Specific function: Unknown

COG id: COG3946

COG function: function code U; Type IV secretory pathway, VirJ component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48600; Mature: 48600

Theoretical pI: Translated: 5.44; Mature: 5.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRLEMWSALCGAAMLTLSGMAAAQAPEPVSHGRFEQVPVLMPKGEPQRVVIWLAGAGNA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCH
ATRQAQAESLRADGAMVAVVDTAHLYAVLRKAGGTCTFSVGDVENFSRYVQAFYHIPTYR
HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEE
LPLLVGDGEGAALAYAIAAQAKPHVLAGVLTDGLCPATVSNQAICQPGVRPGTNTLLPVP
EEEEEECCCCCEEEEEEHHCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECC
LQIPWVLAASQDKRCPAAAEEGFLKQVPQARTFRRSAQGDILPGLRAAVRSLGEQKGVAL
CCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADALAAQGIPVVGLD
CCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEHH
SLRYFWTERTPQGFADDLDRIARIYAQRWDRQRVVLIGFSQGADVLPAAINKLPAATKQN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHCC
LRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLPAGTTVCIYGQDDDDALCPSL
CEEEEHHHHCCCCCCEEEHHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCC
PANVARRVALPGDHHFKGDYATLAKTIMDQLHALSKP
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRRLEMWSALCGAAMLTLSGMAAAQAPEPVSHGRFEQVPVLMPKGEPQRVVIWLAGAGNA
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCEEEEEEECCCCH
ATRQAQAESLRADGAMVAVVDTAHLYAVLRKAGGTCTFSVGDVENFSRYVQAFYHIPTYR
HHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHCCCEE
LPLLVGDGEGAALAYAIAAQAKPHVLAGVLTDGLCPATVSNQAICQPGVRPGTNTLLPVP
EEEEEECCCCCEEEEEEHHCCCCCEEHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECC
LQIPWVLAASQDKRCPAAAEEGFLKQVPQARTFRRSAQGDILPGLRAAVRSLGEQKGVAL
CCCCEEEECCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC
PPPPGGLADLPVVELPAKPDGDSDDDTFVIFVSGDGGWAGLDEEVADALAAQGIPVVGLD
CCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEHH
SLRYFWTERTPQGFADDLDRIARIYAQRWDRQRVVLIGFSQGADVLPAAINKLPAATKQN
HHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHCCCCHHCC
LRMTALLSVGKLADYEFHVSNWLGSDDEGLPIAPEVQRLPAGTTVCIYGQDDDDALCPSL
CEEEEHHHHCCCCCCEEEHHHCCCCCCCCCCCCCHHHHCCCCCEEEEECCCCCCCCCCCC
PANVARRVALPGDHHFKGDYATLAKTIMDQLHALSKP
CHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA