| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242057
Identifier: 21242057
GI number: 21242057
Start: 1495675
End: 1498359
Strand: Direct
Name: 21242057
Synonym: XAC1304
Alternate gene names: NA
Gene position: 1495675-1498359 (Clockwise)
Preceding gene: 21242053
Following gene: 21242058
Centisome position: 28.9
GC content: 60.71
Gene sequence:
>2685_bases TTGATCCAATCGGGCGCAGTGGTGAAGAGCCCCGGCGACAAGCTCTTCGGGGACAGCATCAACCTCTATACGGGCTCGAT GGAGATCGTCCAGACCGATGTGGATCTGAAGGGCAACAATGCGCTCCAAGTCCGTGTAGGTCGTCGGTTCACGGTGGGGA GCCCGACGAAGGGCCACTTCAAGCTTTGGGATTTGGATATTCCCTACATGCATGGTGTCTTCGGCTTTCCGGGTGGCAAC ATTGCTCCCGATGGCTGGGTGGTCAACGGGACCAGGGACACGGCCTACAGCCGCTGTAGCCGTTATGAGGTTCCCCCTGC CTTTGAAAATCAAGGTGGCTACTTTGACCCTTCGGAGTTTTGGAGGGGAAGCTTTCTTTATCGGCCAGAGAGCGGGGACC AAGAGCTTTTGCAGACCTCAGCCCAGGCGCTGCGGCCGAACGATGGCAGAACCTATCCCATCGTCTTGAAGGATGGTTCT GCCGTCCGCTGCCTGGCGTCGCTCGATGGCGCCAGCGAGTCGGGTGCTCGTGGCGAAGGGTTCGAACTGGTCGACACGCA GGGCAGCGTGTATGCGTTCAACCACATGGTTTCGCGCACGTATCCAGCCTTGAGCAAGTCGTCGCCTGTTCCCCAAGCCA ATTCGGTGGGCACGGCATCTGCTGGCGGGGCGAGCATGACGACAGCAGGTATCGGGAACATTGTTCCCATGGTGGCCAAC AACTACATTCTGGTTCGCAAAGAGGTCTTGATCTATCCCACGCGAGTGACCGATCGCTTCGGCAACACGGTGACGTACAA CTGGAATCCTGGCGCCCCTTGGCAGCTGCTAAGCATCGTTGCCAGTGACGGCCGTCGAATCGACTTGTCGTATGCCGGGG GAGACGGCAACACCATCACGTCAGTGACCACTGGCGGGCGGACATGGTCTTACGGCTACAGCGACACCCTGGACACGGTG ACGTTGCCTGACGGCAGCAGCTGGACCTTCGATTTGCTCGCTTTGTCCCGTGCACGTGTGACTTACGGCCAGCCACCAGG CTGCGACAACATCCGCCCGTGGTCACGCACCAACGTGGTCGGAAGCATCACGGCGCCCACGGGCGCTCGCAGCGATTACA CGGTCAACTCGATGCTCATGGGACGGTCGTGGGTGCCCAGGGTGTGCCGGATCCAGGAGGCCTACTCGGACATCCCCTAC CAGTTCTACGTCATGGCCGTCACCAGTCGTCGGATCTCTGGCCCCGGGTTGCCCGCACAGGGACTCACGTGGACGTATGA CTACGGCACGCCCAATAACTGCTGGCAGCCAAGCCCCTACCCAAATCCCAGCGACCCTGCCAAATACGTCGAATGCAATG CCGGTTCCCCCATCACGCGGGACATCACGGTCAAAGATCCCGCTGGGCAGGTCACGCGCTACCGGTTTGGCAATCGCTAC TGGTCCAACGAGGGTCTGCTTTTGCAGCAGGACTTCGGATGGAACGGGTCGACGGCCAAGCGCACAAAAATGAGCGACTA CGCAGCGTTCGATGCAGCACCTTACGCGGCGAGGACCATGTATCCAGCCGGCAACTACGGGGACAACACCGTGGCTGCCA GGCAGCGGCCTGTGCGCCAGGTGATCACGATCGACAACGGCGACCAGTTCGTTTGGCGCATCGCGGACTGCAATGGGCAG CCGTGCTTCGATGAGTTCGCGAGGCCAACGCGCACTGAGCGGTTCAGTCCTTGGCACAGCCGCACCGACGAAACCGCGTA TTACGACGAACGCGGGGCGTGGGTGTTGGGACAGACCGCCATGGCTCGCAACGTCAACACAGGCATCGCGATCTCTCAGA TTGACTATGGTGCCAATGCATTGCCCCAGACGGAGCGGCGCAACGGAAAGGTGGTTGCGACTTATACCTACAATCCCGAT GGGACCCTGGCCCAGGTCAAGGATGGCCTAGGAAATGCAACGACCCTGTCCGGTTGGAAGCGTGGCATCCCCCAGACGGT TGCAAATGCCGATGGCACGGCCAAGTCCGCCTCGGTGGACGACAACGGGTGGATCCGCCAGACCACCGACGAGAATGGAT TTGCGACCACGTATGGTTACGACGCGATGGGCCGGCTGAATGCCACGAACTACCCATCGGGCGACAGCACAGCGTGGAAC TCGACCGCACAGACATTCGAGCGGGTGGGTAGCGACGAATATGGCATCGGTGCCGGCCATTGGCGCCAGACCGTGACTAC CGGGAACGCCCAGAAGATCACTTACTTTGATGCGCTGTGGCAGCCGCTGTTGACGCGGGAATACGACGCGGCAAACTTGG CGGGAACGCTGCGGACCAAGCGCTTCGCCTACGACCATGAGGGAAGGGCCGTCTTTGCGTCTTACCCGAGCAGCACCGAA GCGGCGAGCACTGGGATCTGGACCGAATTCGACGTGGTGGGCAGGCCCACGGCGATATCCCAGGACAGCGAGCAGGGATT GCTGACCACGATCACGCAGTATCTGCCTGGCGCACAAACCCTAGTCACCAACCCGCGAGGTGCTCAGACGCGCACGGGTT ACCAGGTGTTCGATCAACCGGTCTATGACGCGCCTGTGTGGGTGCAGCTACCAGAGTCCAGCAGGACCAACATTACTCGT GACGTTTTCGGCAAGGCGATCAAGATCGAGCGGGGTGCTCAATGA
Upstream 100 bases:
>100_bases CTCGCGTCAGAGACGCGTGTTTGGATTGGCGCTGGCTGCTTTGGTTGGACTGTCGCCTGCACTGGGTGCGGCCGAGGATG TCTACGACGACTATGGCAAG
Downstream 100 bases:
>100_bases TATCGTGCATGGAAGCAGTGAATTCTGATCGTAGGGACACTCAAAGAATCGCCAATCGAAAGTCGCTCTTCTTCTCCCTC ATTTCACTAGTGCTTGGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: Wall Associated Protein; YD Repeat Protein; Rhs Family Protein; Wall-Associated Protein; RHS Family Protein; Secreted Protein
Number of amino acids: Translated: 894; Mature: 894
Protein sequence:
>894_residues MIQSGAVVKSPGDKLFGDSINLYTGSMEIVQTDVDLKGNNALQVRVGRRFTVGSPTKGHFKLWDLDIPYMHGVFGFPGGN IAPDGWVVNGTRDTAYSRCSRYEVPPAFENQGGYFDPSEFWRGSFLYRPESGDQELLQTSAQALRPNDGRTYPIVLKDGS AVRCLASLDGASESGARGEGFELVDTQGSVYAFNHMVSRTYPALSKSSPVPQANSVGTASAGGASMTTAGIGNIVPMVAN NYILVRKEVLIYPTRVTDRFGNTVTYNWNPGAPWQLLSIVASDGRRIDLSYAGGDGNTITSVTTGGRTWSYGYSDTLDTV TLPDGSSWTFDLLALSRARVTYGQPPGCDNIRPWSRTNVVGSITAPTGARSDYTVNSMLMGRSWVPRVCRIQEAYSDIPY QFYVMAVTSRRISGPGLPAQGLTWTYDYGTPNNCWQPSPYPNPSDPAKYVECNAGSPITRDITVKDPAGQVTRYRFGNRY WSNEGLLLQQDFGWNGSTAKRTKMSDYAAFDAAPYAARTMYPAGNYGDNTVAARQRPVRQVITIDNGDQFVWRIADCNGQ PCFDEFARPTRTERFSPWHSRTDETAYYDERGAWVLGQTAMARNVNTGIAISQIDYGANALPQTERRNGKVVATYTYNPD GTLAQVKDGLGNATTLSGWKRGIPQTVANADGTAKSASVDDNGWIRQTTDENGFATTYGYDAMGRLNATNYPSGDSTAWN STAQTFERVGSDEYGIGAGHWRQTVTTGNAQKITYFDALWQPLLTREYDAANLAGTLRTKRFAYDHEGRAVFASYPSSTE AASTGIWTEFDVVGRPTAISQDSEQGLLTTITQYLPGAQTLVTNPRGAQTRTGYQVFDQPVYDAPVWVQLPESSRTNITR DVFGKAIKIERGAQ
Sequences:
>Translated_894_residues MIQSGAVVKSPGDKLFGDSINLYTGSMEIVQTDVDLKGNNALQVRVGRRFTVGSPTKGHFKLWDLDIPYMHGVFGFPGGN IAPDGWVVNGTRDTAYSRCSRYEVPPAFENQGGYFDPSEFWRGSFLYRPESGDQELLQTSAQALRPNDGRTYPIVLKDGS AVRCLASLDGASESGARGEGFELVDTQGSVYAFNHMVSRTYPALSKSSPVPQANSVGTASAGGASMTTAGIGNIVPMVAN NYILVRKEVLIYPTRVTDRFGNTVTYNWNPGAPWQLLSIVASDGRRIDLSYAGGDGNTITSVTTGGRTWSYGYSDTLDTV TLPDGSSWTFDLLALSRARVTYGQPPGCDNIRPWSRTNVVGSITAPTGARSDYTVNSMLMGRSWVPRVCRIQEAYSDIPY QFYVMAVTSRRISGPGLPAQGLTWTYDYGTPNNCWQPSPYPNPSDPAKYVECNAGSPITRDITVKDPAGQVTRYRFGNRY WSNEGLLLQQDFGWNGSTAKRTKMSDYAAFDAAPYAARTMYPAGNYGDNTVAARQRPVRQVITIDNGDQFVWRIADCNGQ PCFDEFARPTRTERFSPWHSRTDETAYYDERGAWVLGQTAMARNVNTGIAISQIDYGANALPQTERRNGKVVATYTYNPD GTLAQVKDGLGNATTLSGWKRGIPQTVANADGTAKSASVDDNGWIRQTTDENGFATTYGYDAMGRLNATNYPSGDSTAWN STAQTFERVGSDEYGIGAGHWRQTVTTGNAQKITYFDALWQPLLTREYDAANLAGTLRTKRFAYDHEGRAVFASYPSSTE AASTGIWTEFDVVGRPTAISQDSEQGLLTTITQYLPGAQTLVTNPRGAQTRTGYQVFDQPVYDAPVWVQLPESSRTNITR DVFGKAIKIERGAQ >Mature_894_residues MIQSGAVVKSPGDKLFGDSINLYTGSMEIVQTDVDLKGNNALQVRVGRRFTVGSPTKGHFKLWDLDIPYMHGVFGFPGGN IAPDGWVVNGTRDTAYSRCSRYEVPPAFENQGGYFDPSEFWRGSFLYRPESGDQELLQTSAQALRPNDGRTYPIVLKDGS AVRCLASLDGASESGARGEGFELVDTQGSVYAFNHMVSRTYPALSKSSPVPQANSVGTASAGGASMTTAGIGNIVPMVAN NYILVRKEVLIYPTRVTDRFGNTVTYNWNPGAPWQLLSIVASDGRRIDLSYAGGDGNTITSVTTGGRTWSYGYSDTLDTV TLPDGSSWTFDLLALSRARVTYGQPPGCDNIRPWSRTNVVGSITAPTGARSDYTVNSMLMGRSWVPRVCRIQEAYSDIPY QFYVMAVTSRRISGPGLPAQGLTWTYDYGTPNNCWQPSPYPNPSDPAKYVECNAGSPITRDITVKDPAGQVTRYRFGNRY WSNEGLLLQQDFGWNGSTAKRTKMSDYAAFDAAPYAARTMYPAGNYGDNTVAARQRPVRQVITIDNGDQFVWRIADCNGQ PCFDEFARPTRTERFSPWHSRTDETAYYDERGAWVLGQTAMARNVNTGIAISQIDYGANALPQTERRNGKVVATYTYNPD GTLAQVKDGLGNATTLSGWKRGIPQTVANADGTAKSASVDDNGWIRQTTDENGFATTYGYDAMGRLNATNYPSGDSTAWN STAQTFERVGSDEYGIGAGHWRQTVTTGNAQKITYFDALWQPLLTREYDAANLAGTLRTKRFAYDHEGRAVFASYPSSTE AASTGIWTEFDVVGRPTAISQDSEQGLLTTITQYLPGAQTLVTNPRGAQTRTGYQVFDQPVYDAPVWVQLPESSRTNITR DVFGKAIKIERGAQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97829; Mature: 97829
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQSGAVVKSPGDKLFGDSINLYTGSMEIVQTDVDLKGNNALQVRVGRRFTVGSPTKGHF CCCCCCEEECCCCCCCCCCEEEEECCEEEEEEECCCCCCCEEEEEECCEEECCCCCCCCE KLWDLDIPYMHGVFGFPGGNIAPDGWVVNGTRDTAYSRCSRYEVPPAFENQGGYFDPSEF EEEECCCCHHCCEEECCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH WRGSFLYRPESGDQELLQTSAQALRPNDGRTYPIVLKDGSAVRCLASLDGASESGARGEG CCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCC FELVDTQGSVYAFNHMVSRTYPALSKSSPVPQANSVGTASAGGASMTTAGIGNIVPMVAN EEEEECCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHC NYILVRKEVLIYPTRVTDRFGNTVTYNWNPGAPWQLLSIVASDGRRIDLSYAGGDGNTIT CEEEEEEEEEEEEEEHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEE SVTTGGRTWSYGYSDTLDTVTLPDGSSWTFDLLALSRARVTYGQPPGCDNIRPWSRTNVV EEECCCEEEECCCCCCCCEEECCCCCCCEEEEEEHHHHHEECCCCCCCCCCCCCCCCCEE GSITAPTGARSDYTVNSMLMGRSWVPRVCRIQEAYSDIPYQFYVMAVTSRRISGPGLPAQ EEEECCCCCCCCCEEHHEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC GLTWTYDYGTPNNCWQPSPYPNPSDPAKYVECNAGSPITRDITVKDPAGQVTRYRFGNRY CCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCEE WSNEGLLLQQDFGWNGSTAKRTKMSDYAAFDAAPYAARTMYPAGNYGDNTVAARQRPVRQ ECCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHEEECCCCCCCCCCHHHHHCCCEE VITIDNGDQFVWRIADCNGQPCFDEFARPTRTERFSPWHSRTDETAYYDERGAWVLGQTA EEEEECCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECHH MARNVNTGIAISQIDYGANALPQTERRNGKVVATYTYNPDGTLAQVKDGLGNATTLSGWK HHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCEECCHHH RGIPQTVANADGTAKSASVDDNGWIRQTTDENGFATTYGYDAMGRLNATNYPSGDSTAWN CCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC STAQTFERVGSDEYGIGAGHWRQTVTTGNAQKITYFDALWQPLLTREYDAANLAGTLRTK HHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH RFAYDHEGRAVFASYPSSTEAASTGIWTEFDVVGRPTAISQDSEQGLLTTITQYLPGAQT EEEECCCCCEEEEECCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCE LVTNPRGAQTRTGYQVFDQPVYDAPVWVQLPESSRTNITRDVFGKAIKIERGAQ EEECCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCCEEEECCCCC >Mature Secondary Structure MIQSGAVVKSPGDKLFGDSINLYTGSMEIVQTDVDLKGNNALQVRVGRRFTVGSPTKGHF CCCCCCEEECCCCCCCCCCEEEEECCEEEEEEECCCCCCCEEEEEECCEEECCCCCCCCE KLWDLDIPYMHGVFGFPGGNIAPDGWVVNGTRDTAYSRCSRYEVPPAFENQGGYFDPSEF EEEECCCCHHCCEEECCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCHHHH WRGSFLYRPESGDQELLQTSAQALRPNDGRTYPIVLKDGSAVRCLASLDGASESGARGEG CCCEEEECCCCCCHHHHHHHHHHCCCCCCCEEEEEEECCCEEEEEEECCCCCCCCCCCCC FELVDTQGSVYAFNHMVSRTYPALSKSSPVPQANSVGTASAGGASMTTAGIGNIVPMVAN EEEEECCCCEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCHHHHHC NYILVRKEVLIYPTRVTDRFGNTVTYNWNPGAPWQLLSIVASDGRRIDLSYAGGDGNTIT CEEEEEEEEEEEEEEHHHHCCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEECCCCCEEE SVTTGGRTWSYGYSDTLDTVTLPDGSSWTFDLLALSRARVTYGQPPGCDNIRPWSRTNVV EEECCCEEEECCCCCCCCEEECCCCCCCEEEEEEHHHHHEECCCCCCCCCCCCCCCCCEE GSITAPTGARSDYTVNSMLMGRSWVPRVCRIQEAYSDIPYQFYVMAVTSRRISGPGLPAQ EEEECCCCCCCCCEEHHEECCCCCCHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC GLTWTYDYGTPNNCWQPSPYPNPSDPAKYVECNAGSPITRDITVKDPAGQVTRYRFGNRY CCEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCEEEEECCCEE WSNEGLLLQQDFGWNGSTAKRTKMSDYAAFDAAPYAARTMYPAGNYGDNTVAARQRPVRQ ECCCCEEEEECCCCCCCCCCCCCCCHHHHCCCCCCHHEEECCCCCCCCCCHHHHHCCCEE VITIDNGDQFVWRIADCNGQPCFDEFARPTRTERFSPWHSRTDETAYYDERGAWVLGQTA EEEEECCCEEEEEEECCCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCEEEECHH MARNVNTGIAISQIDYGANALPQTERRNGKVVATYTYNPDGTLAQVKDGLGNATTLSGWK HHCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCEECCHHH RGIPQTVANADGTAKSASVDDNGWIRQTTDENGFATTYGYDAMGRLNATNYPSGDSTAWN CCCCHHHHCCCCCCCCCCCCCCCCEEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCC STAQTFERVGSDEYGIGAGHWRQTVTTGNAQKITYFDALWQPLLTREYDAANLAGTLRTK HHHHHHHHHCCCCCCCCCCHHHEEEECCCCEEEEHHHHHHHHHHHCCCCCHHHHHHHHHH RFAYDHEGRAVFASYPSSTEAASTGIWTEFDVVGRPTAISQDSEQGLLTTITQYLPGAQT EEEECCCCCEEEEECCCCCCHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCE LVTNPRGAQTRTGYQVFDQPVYDAPVWVQLPESSRTNITRDVFGKAIKIERGAQ EEECCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCCCCHHHCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA