| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21242044
Identifier: 21242044
GI number: 21242044
Start: 1480924
End: 1481721
Strand: Direct
Name: 21242044
Synonym: XAC1291
Alternate gene names: NA
Gene position: 1480924-1481721 (Clockwise)
Preceding gene: 21242043
Following gene: 21242045
Centisome position: 28.61
GC content: 66.67
Gene sequence:
>798_bases GTGCCGTTGATCTTCTGTAATGGCATCGCCGCTACCGCGCAGCAGCTCGGTGCTGCGGCGTTGAACAATTACGGTCACTT CACCACGCTGCAAGTGCGCGATAACGCTGTACTTGGTCTGGACCTGCATCTGCAACGTCTGCAGCACGACAGCGCAGCCC TGTTTGGTGCTGCTGCCGATCCCGACGCCATTCGCGCGCAGTTGCGCGTTGCGTTGTCGGCTGCCGGCAGCACCGATGCG AGCGTGCGCATTACGGTGTTTTCGCAGGATTTCGACCTGCGCGATCCATCGCGCGCTGTCGCACTGGATGTGCTGATCTC GCTCTCGCCCGCCGCGCAGATGCCAGCGACCGCTGTGCGCGTGCAGCCGGCCCATTACGTGCGCGAGCAGCCGCTGCGCA AGCACGTCGGCACCTTCGCGCTGCTGCAGCTGCGCCGTCAGGCAATGCTTGCCGGGTTCGACGATGCGCTGCTGATCGAT CCGCAAGGCCGGCTCGTGGAGGGTGCGTTCTGGAATCTGGGCCTGTGGCAGCAGGGCAGGGTCGTGTGGCCGCAGGGGCC GGCCTTGCCCGGCACCCGGCAGCGTCTGCTGCAGGCCGGGCTGCAAGCGCTTGGCATCGAGCAGGAGGCGCGCCCGGTCA CGCTGGGTGAACTCCAGGCATTCGATGGCGGCTTCAGCTGCAATGCGCGCGGGCAACAAGCGTTGGCGGCAGTCGGGTCT GTGCAGTGGCCGGACGCCGCCGCCCAGCTGGCGATTCTGGAGCAGGCGCTGCAAACGCAGGCCTGGCAAGCGATCTGA
Upstream 100 bases:
>100_bases ATGCGATGCAGGCCTGGGCCGGCCAATCCGCCTGGATGGCGCCCGCACAACCGGCTGCGCAGGTCGTGACGCAATGGTGG GAACAGGCGCAGGCGTTGTT
Downstream 100 bases:
>100_bases GCGGCTCAGGGGTGACTTGGCTTCGCCGCCGGGGTGCGCTATAATCGCCTGCTTACCGCGCCACTCTGGCGACTGGGCAA CTCAGGAAAACAACACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: Class IV Aminotransferase
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MPLIFCNGIAATAQQLGAAALNNYGHFTTLQVRDNAVLGLDLHLQRLQHDSAALFGAAADPDAIRAQLRVALSAAGSTDA SVRITVFSQDFDLRDPSRAVALDVLISLSPAAQMPATAVRVQPAHYVREQPLRKHVGTFALLQLRRQAMLAGFDDALLID PQGRLVEGAFWNLGLWQQGRVVWPQGPALPGTRQRLLQAGLQALGIEQEARPVTLGELQAFDGGFSCNARGQQALAAVGS VQWPDAAAQLAILEQALQTQAWQAI
Sequences:
>Translated_265_residues MPLIFCNGIAATAQQLGAAALNNYGHFTTLQVRDNAVLGLDLHLQRLQHDSAALFGAAADPDAIRAQLRVALSAAGSTDA SVRITVFSQDFDLRDPSRAVALDVLISLSPAAQMPATAVRVQPAHYVREQPLRKHVGTFALLQLRRQAMLAGFDDALLID PQGRLVEGAFWNLGLWQQGRVVWPQGPALPGTRQRLLQAGLQALGIEQEARPVTLGELQAFDGGFSCNARGQQALAAVGS VQWPDAAAQLAILEQALQTQAWQAI >Mature_264_residues PLIFCNGIAATAQQLGAAALNNYGHFTTLQVRDNAVLGLDLHLQRLQHDSAALFGAAADPDAIRAQLRVALSAAGSTDAS VRITVFSQDFDLRDPSRAVALDVLISLSPAAQMPATAVRVQPAHYVREQPLRKHVGTFALLQLRRQAMLAGFDDALLIDP QGRLVEGAFWNLGLWQQGRVVWPQGPALPGTRQRLLQAGLQALGIEQEARPVTLGELQAFDGGFSCNARGQQALAAVGSV QWPDAAAQLAILEQALQTQAWQAI
Specific function: Unknown
COG id: COG0115
COG function: function code EH; Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28377; Mature: 28246
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIFCNGIAATAQQLGAAALNNYGHFTTLQVRDNAVLGLDLHLQRLQHDSAALFGAAAD CCEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEHHHHHHHHCCCCHHEEECCCC PDAIRAQLRVALSAAGSTDASVRITVFSQDFDLRDPSRAVALDVLISLSPAAQMPATAVR HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE VQPAHYVREQPLRKHVGTFALLQLRRQAMLAGFDDALLIDPQGRLVEGAFWNLGLWQQGR ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECEEECCCCCCCCC VVWPQGPALPGTRQRLLQAGLQALGIEQEARPVTLGELQAFDGGFSCNARGQQALAAVGS EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCC VQWPDAAAQLAILEQALQTQAWQAI CCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PLIFCNGIAATAQQLGAAALNNYGHFTTLQVRDNAVLGLDLHLQRLQHDSAALFGAAAD CEEEECCHHHHHHHHHHHHHCCCCCEEEEEEECCEEEEHHHHHHHHCCCCHHEEECCCC PDAIRAQLRVALSAAGSTDASVRITVFSQDFDLRDPSRAVALDVLISLSPAAQMPATAVR HHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEE VQPAHYVREQPLRKHVGTFALLQLRRQAMLAGFDDALLIDPQGRLVEGAFWNLGLWQQGR ECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEECEEECCCCCCCCC VVWPQGPALPGTRQRLLQAGLQALGIEQEARPVTLGELQAFDGGFSCNARGQQALAAVGS EECCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCCCHHHHHHHCC VQWPDAAAQLAILEQALQTQAWQAI CCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA