| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is ate1 [H]
Identifier: 21241993
GI number: 21241993
Start: 1416338
End: 1417093
Strand: Reverse
Name: ate1 [H]
Synonym: XAC1239
Alternate gene names: 21241993
Gene position: 1417093-1416338 (Counterclockwise)
Preceding gene: 21241995
Following gene: 21241992
Centisome position: 27.38
GC content: 67.46
Gene sequence:
>756_bases ATGGCCATCCATGCCGACACCCACGACGACCTGCGCCTGTTCCAGACCGGCGAGCATGCCTGTGGCTATTGGTCCGGCCG GCAGGCGCGCGATCTGGTGCTGGATCCGCACGATCCGCGCCTGGGGGCGATCTATCCGCAAGCGCTGGCATGGGGCTTCC GTCGCTCCGGCGATCTGGTCTACCGGCCGCACTGCGAACGGTGCCGTGCCTGTGTGCCGGTACGCATCGCGGTGGATGCG TTTCACCCCGACCGCAGCCAACGCCGTTGCCTGGCGCGTAACCGGGATCTGGTGGTGCGCGTGGTAGCCGCCGAGCGCAC CGACGAACAACTGGCGCTCTATCGCCAGTACCTCAAGCACCGGCATCCCGGCGGCGGCATGGACCAACATGGCGCCACCG AATTCGACCAGTTCCTGATCGGCGGCTGGTCGCACGGACGCTTTCTGGAGATTCGCGAACCGGCCATCGCGCACCTGCCC GGCCGGCTGCTGGCGGTCGCAGTGACCGATGTCACCGAGCATGCGTTGTCGGCGGTGTACACGTTCTACGCGCCGGAGGC GGCAGCGCGCAGCCTGGGCACGTTCGCGATCCTGCAGCAGATCCAGTGGGCGCAACGCGAGCGACGCGCGCACCTGTATC TGGGGTACTGGATCGATGGCCACGCGAAGATGAACTACAAGCGCCGCTTCAGCGCACTGGAAGCCTACGATGGTCGCCAC TGGCGCGGCTTGCCCGCCCACGCATCGGTCGACTGA
Upstream 100 bases:
>100_bases CATCAACGAGCCATCGATGCGCGCGTTGACGTCCAGGCCGGACGTATTCATCCGGCGGACAGTCGCCGCTGATGCGACGC GCAGGCGCTATCCTTCGGCC
Downstream 100 bases:
>100_bases ACCGCCGGATTGCGACATCGGCGTGTCGCATCCCGCATGCGAGAATCTGGCAATGATCAAACCTCTCCTGCTGCTCGCGC TGACCGCCTTGTGCGCGGCC
Product: arginyl-tRNA-protein transferase
Products: NA
Alternate protein names: Arginyltransferase; R-transferase [H]
Number of amino acids: Translated: 251; Mature: 250
Protein sequence:
>251_residues MAIHADTHDDLRLFQTGEHACGYWSGRQARDLVLDPHDPRLGAIYPQALAWGFRRSGDLVYRPHCERCRACVPVRIAVDA FHPDRSQRRCLARNRDLVVRVVAAERTDEQLALYRQYLKHRHPGGGMDQHGATEFDQFLIGGWSHGRFLEIREPAIAHLP GRLLAVAVTDVTEHALSAVYTFYAPEAAARSLGTFAILQQIQWAQRERRAHLYLGYWIDGHAKMNYKRRFSALEAYDGRH WRGLPAHASVD
Sequences:
>Translated_251_residues MAIHADTHDDLRLFQTGEHACGYWSGRQARDLVLDPHDPRLGAIYPQALAWGFRRSGDLVYRPHCERCRACVPVRIAVDA FHPDRSQRRCLARNRDLVVRVVAAERTDEQLALYRQYLKHRHPGGGMDQHGATEFDQFLIGGWSHGRFLEIREPAIAHLP GRLLAVAVTDVTEHALSAVYTFYAPEAAARSLGTFAILQQIQWAQRERRAHLYLGYWIDGHAKMNYKRRFSALEAYDGRH WRGLPAHASVD >Mature_250_residues AIHADTHDDLRLFQTGEHACGYWSGRQARDLVLDPHDPRLGAIYPQALAWGFRRSGDLVYRPHCERCRACVPVRIAVDAF HPDRSQRRCLARNRDLVVRVVAAERTDEQLALYRQYLKHRHPGGGMDQHGATEFDQFLIGGWSHGRFLEIREPAIAHLPG RLLAVAVTDVTEHALSAVYTFYAPEAAARSLGTFAILQQIQWAQRERRAHLYLGYWIDGHAKMNYKRRFSALEAYDGRHW RGLPAHASVD
Specific function: May conjugate Arg from its aminoacyl-tRNA to the N- termini of proteins containing an N-terminal aspartate or glutamate (Potential) [H]
COG id: COG2935
COG function: function code O; Putative arginyl-tRNA:protein arginylyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the R-transferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016181 - InterPro: IPR007472 - InterPro: IPR017138 - InterPro: IPR007471 [H]
Pfam domain/function: PF04377 ATE_C; PF04376 ATE_N [H]
EC number: =2.3.2.8 [H]
Molecular weight: Translated: 28697; Mature: 28566
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIHADTHDDLRLFQTGEHACGYWSGRQARDLVLDPHDPRLGAIYPQALAWGFRRSGDLV CEECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCEE YRPHCERCRACVPVRIAVDAFHPDRSQRRCLARNRDLVVRVVAAERTDEQLALYRQYLKH ECCCHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH RHPGGGMDQHGATEFDQFLIGGWSHGRFLEIREPAIAHLPGRLLAVAVTDVTEHALSAVY CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHCCCCEEEEEHHHHHHHHHHHHH TFYAPEAAARSLGTFAILQQIQWAQRERRAHLYLGYWIDGHAKMNYKRRFSALEAYDGRH HHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCC WRGLPAHASVD CCCCCCCCCCC >Mature Secondary Structure AIHADTHDDLRLFQTGEHACGYWSGRQARDLVLDPHDPRLGAIYPQALAWGFRRSGDLV EECCCCCCCCEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCEE YRPHCERCRACVPVRIAVDAFHPDRSQRRCLARNRDLVVRVVAAERTDEQLALYRQYLKH ECCCHHHHCCCCCEEEEEEECCCCHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHHHH RHPGGGMDQHGATEFDQFLIGGWSHGRFLEIREPAIAHLPGRLLAVAVTDVTEHALSAVY CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEECCCHHHHCCCCEEEEEHHHHHHHHHHHHH TFYAPEAAARSLGTFAILQQIQWAQRERRAHLYLGYWIDGHAKMNYKRRFSALEAYDGRH HHHCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCCCHHHHHHHHHHCCCCC WRGLPAHASVD CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA