| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241987
Identifier: 21241987
GI number: 21241987
Start: 1411049
End: 1411675
Strand: Reverse
Name: 21241987
Synonym: XAC1233
Alternate gene names: NA
Gene position: 1411675-1411049 (Counterclockwise)
Preceding gene: 21241988
Following gene: 77748571
Centisome position: 27.28
GC content: 67.15
Gene sequence:
>627_bases ATGCCGCTGATCCCGCGGCTGGCATGCGAGCCTGGCCTGGACGAAGCATTGGACCGTCTGCAGACCGCAACCGGCCGCAT CGGCCAGGTACACGACGCCACGCTGCCGATCGACGGATTGCAGCGCCGCCTGAGCCAGCTCGGGCTCGCCGCCGACGACT ACGTGCAACGGACCGGCCTGCAGTTGATGGCCGAACCAGCCGCACTGCAGTTTGCCGGACGCGATCGCTTCGGCCGCCCG CTGTGGCTCAGTGCCCGCGCTGCACGCGCATGGCGACAGATGCGCGCGGCTGCGCTGCGCGCAGACATCGTGCTCGATGC GATTTCCGGCTACCGCAGCCACGACTACCAACTGGGCATCTTCGAGCGCAAGTTCGCGCGCGGGCTCACCCTGGAGCAGA TCCTGACGGTCAACGCAGCGCCGGGTTTCAGCGAACATCACAGCGGCGACGCACTGGATCTGGGCACACCGGGCGAGCCG CCGGCCGAAGAGTCCTTCGAAGCCACGCCTGCATTCGCCTGGTTGTGCAGCAACGCGCACGCATTCGGCTACCGCCTGAG TTACCCACGCAACAACCCGCACGGCATCGTCTACGAACCGTGGCATTGGTGTTGGTCGGCGGGATGA
Upstream 100 bases:
>100_bases GCGCGGTAATGCGGATGCGCGTGTGCTGGCACAGGCCGACTGGCTATTGCGGCGCAAACGCGATGGGCGCTATCTGGCTG CACATCTTCCGCAGGGCCTG
Downstream 100 bases:
>100_bases GCCGGCCGAACTTCATGCGCCACGCAACCCGGCTGGACCCGACCGCCCGTCGCATCTGCCCCGCGTGCGAGCGTCCTACT CCTGCGAACGCGGTGTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Carboxypeptidase; Peptidase; D-Alanyl-D-Alanine Carboxypeptidase Family; M15B Family D-Ala-D-Ala Carboxypeptidase VanY; D D-Carboxypeptidase; D-Ala-D-Ala Carboxypeptidase; Serine-Type D-Ala-D-Ala Carboxypeptidase; D D-Peptidase/D D-Carboxypeptidase
Number of amino acids: Translated: 208; Mature: 207
Protein sequence:
>208_residues MPLIPRLACEPGLDEALDRLQTATGRIGQVHDATLPIDGLQRRLSQLGLAADDYVQRTGLQLMAEPAALQFAGRDRFGRP LWLSARAARAWRQMRAAALRADIVLDAISGYRSHDYQLGIFERKFARGLTLEQILTVNAAPGFSEHHSGDALDLGTPGEP PAEESFEATPAFAWLCSNAHAFGYRLSYPRNNPHGIVYEPWHWCWSAG
Sequences:
>Translated_208_residues MPLIPRLACEPGLDEALDRLQTATGRIGQVHDATLPIDGLQRRLSQLGLAADDYVQRTGLQLMAEPAALQFAGRDRFGRP LWLSARAARAWRQMRAAALRADIVLDAISGYRSHDYQLGIFERKFARGLTLEQILTVNAAPGFSEHHSGDALDLGTPGEP PAEESFEATPAFAWLCSNAHAFGYRLSYPRNNPHGIVYEPWHWCWSAG >Mature_207_residues PLIPRLACEPGLDEALDRLQTATGRIGQVHDATLPIDGLQRRLSQLGLAADDYVQRTGLQLMAEPAALQFAGRDRFGRPL WLSARAARAWRQMRAAALRADIVLDAISGYRSHDYQLGIFERKFARGLTLEQILTVNAAPGFSEHHSGDALDLGTPGEPP AEESFEATPAFAWLCSNAHAFGYRLSYPRNNPHGIVYEPWHWCWSAG
Specific function: Unknown
COG id: COG1876
COG function: function code M; D-alanyl-D-alanine carboxypeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23018; Mature: 22887
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLIPRLACEPGLDEALDRLQTATGRIGQVHDATLPIDGLQRRLSQLGLAADDYVQRTGL CCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCH QLMAEPAALQFAGRDRFGRPLWLSARAARAWRQMRAAALRADIVLDAISGYRSHDYQLGI HHHCCCHHHEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECH FERKFARGLTLEQILTVNAAPGFSEHHSGDALDLGTPGEPPAEESFEATPAFAWLCSNAH HHHHHHCCCCHHHHEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCC AFGYRLSYPRNNPHGIVYEPWHWCWSAG CCEEEEECCCCCCCEEEECCHHHHCCCC >Mature Secondary Structure PLIPRLACEPGLDEALDRLQTATGRIGQVHDATLPIDGLQRRLSQLGLAADDYVQRTGL CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCH QLMAEPAALQFAGRDRFGRPLWLSARAARAWRQMRAAALRADIVLDAISGYRSHDYQLGI HHHCCCHHHEECCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECH FERKFARGLTLEQILTVNAAPGFSEHHSGDALDLGTPGEPPAEESFEATPAFAWLCSNAH HHHHHHCCCCHHHHEEECCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHCCCC AFGYRLSYPRNNPHGIVYEPWHWCWSAG CCEEEEECCCCCCCEEEECCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA