| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is minC
Identifier: 21241980
GI number: 21241980
Start: 1404902
End: 1405651
Strand: Reverse
Name: minC
Synonym: XAC1226
Alternate gene names: 21241980
Gene position: 1405651-1404902 (Counterclockwise)
Preceding gene: 77748571
Following gene: 21241979
Centisome position: 27.16
GC content: 68.27
Gene sequence:
>750_bases GTGGCAAGTGTGAATGTGGATTTTGAACAGGCCGGCGAGCTGAAGATCGGCCAAGTAGGGATTGCCAACCTGCGCGTGCG CACCCTGGATGTGTCGCGGCTGGTGCAGGAAATGCGCGAGCGCGTGACCCGCGCGCCCAAGTTGTTCGGCCGTGCGGCGG TGATCCTGGATTTCGGCGGGCTGTCGCAGGTGCCGGACCTGGCCACGGCCAAGGCCCTGCTGGAAGGTCTGCGCGATGCC GGCGTGCTGCCGGTGGCGCTGGCCTACGGCACCAGCGAGATCGACCTGCTGTCCCAGCAGTTGGGCGTGCCGCTGCTGGC CAAATTTCGCGCGCAGTACGAGCCGACCGCGGTCAGCCCGCCACCGCCACCGCCACCGCCGCCCGCACGTGCCGAACCGG CACCGCCGGCCGCGCGACCGGCTCCGGGCCGGATGCAGCGCACCGCGGTGCGTTCCGGTCAGCAGCTGTACGCGGAGAAC TGCGACCTGACCGTACTCAGTACGGTCGGTGCCGGGGCCGAGGTCATCGCCGACGGCAGCATCCATATCTACGGTACCCT GCGTGGCCGCGCTCTGGCCGGCGCGCAGGGCAACCCCGACGCGCGCATCTTCTGCCGCGACTTCCACGCCGAACTGGTTG CCATCGCTGGCCACTACAAGGTGCTGGACGATGTTCCCATGGACCTGCGTGGCAAGGCCGTCCAGGTCTGGCTGGAGCAG GATCAGATCAAGATCGCTGCGCTTGATTGA
Upstream 100 bases:
>100_bases CAAAGAGACCTATGGCGGCAAGTTGCCCGAAGACTTGCCGTGGGTGGGCCGGCCGCGTCATGCCGCCACCACCGCTAGCC CATCGACGGGGAGCTGAGTT
Downstream 100 bases:
>100_bases CGCGGCCCAACCACAGAAATATTCGGAGAAATCCTTTGGCTGAAATCATCGTAGTCACCTCCGGCAAGGGCGGCGTCGGC AAGACCACCACCAGCGCAAG
Product: septum formation inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 248
Protein sequence:
>249_residues MASVNVDFEQAGELKIGQVGIANLRVRTLDVSRLVQEMRERVTRAPKLFGRAAVILDFGGLSQVPDLATAKALLEGLRDA GVLPVALAYGTSEIDLLSQQLGVPLLAKFRAQYEPTAVSPPPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAEN CDLTVLSTVGAGAEVIADGSIHIYGTLRGRALAGAQGNPDARIFCRDFHAELVAIAGHYKVLDDVPMDLRGKAVQVWLEQ DQIKIAALD
Sequences:
>Translated_249_residues MASVNVDFEQAGELKIGQVGIANLRVRTLDVSRLVQEMRERVTRAPKLFGRAAVILDFGGLSQVPDLATAKALLEGLRDA GVLPVALAYGTSEIDLLSQQLGVPLLAKFRAQYEPTAVSPPPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAEN CDLTVLSTVGAGAEVIADGSIHIYGTLRGRALAGAQGNPDARIFCRDFHAELVAIAGHYKVLDDVPMDLRGKAVQVWLEQ DQIKIAALD >Mature_248_residues ASVNVDFEQAGELKIGQVGIANLRVRTLDVSRLVQEMRERVTRAPKLFGRAAVILDFGGLSQVPDLATAKALLEGLRDAG VLPVALAYGTSEIDLLSQQLGVPLLAKFRAQYEPTAVSPPPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAENC DLTVLSTVGAGAEVIADGSIHIYGTLRGRALAGAQGNPDARIFCRDFHAELVAIAGHYKVLDDVPMDLRGKAVQVWLEQD QIKIAALD
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family
Homologues:
Organism=Escherichia coli, GI1787424, Length=239, Percent_Identity=35.9832635983264, Blast_Score=135, Evalue=3e-33,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MINC_XANAC (Q8PN47)
Other databases:
- EMBL: AE008923 - RefSeq: NP_641562.1 - ProteinModelPortal: Q8PN47 - GeneID: 1155297 - GenomeReviews: AE008923_GR - KEGG: xac:XAC1226 - NMPDR: fig|190486.1.peg.1206 - HOGENOM: HBG399077 - OMA: ARIFCRD - ProtClustDB: PRK04596 - BioCyc: XAXO190486:XAC1226-MONOMER - HAMAP: MF_00267 - InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR007874 - InterPro: IPR005526 - Gene3D: G3DSA:2.160.20.70 - TIGRFAMs: TIGR01222
Pfam domain/function: PF03775 MinC_C; PF05209 MinC_N; SSF63848 MinC_C
EC number: NA
Molecular weight: Translated: 26521; Mature: 26390
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVNVDFEQAGELKIGQVGIANLRVRTLDVSRLVQEMRERVTRAPKLFGRAAVILDFGG CCCCCCCHHHCCCEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCC LSQVPDLATAKALLEGLRDAGVLPVALAYGTSEIDLLSQQLGVPLLAKFRAQYEPTAVSP CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCC PPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAENCDLTVLSTVGAGAEVIADGS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCCCEEEECCC IHIYGTLRGRALAGAQGNPDARIFCRDFHAELVAIAGHYKVLDDVPMDLRGKAVQVWLEQ EEEEEEECCEEEECCCCCCCCEEEEEEHHHEEEHHHCCEEEECCCCCCCCCCEEEEEEEC DQIKIAALD CCEEEEEEC >Mature Secondary Structure ASVNVDFEQAGELKIGQVGIANLRVRTLDVSRLVQEMRERVTRAPKLFGRAAVILDFGG CCCCCCHHHCCCEEECCCCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCEEEEEECCC LSQVPDLATAKALLEGLRDAGVLPVALAYGTSEIDLLSQQLGVPLLAKFRAQYEPTAVSP CCCCCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHCCHHHHHHHHCCCCCCCCC PPPPPPPPARAEPAPPAARPAPGRMQRTAVRSGQQLYAENCDLTVLSTVGAGAEVIADGS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCHHHHHCCCCEEEEEECCCCCEEEECCC IHIYGTLRGRALAGAQGNPDARIFCRDFHAELVAIAGHYKVLDDVPMDLRGKAVQVWLEQ EEEEEEECCEEEECCCCCCCCEEEEEEHHHEEEHHHCCEEEECCCCCCCCCCEEEEEEEC DQIKIAALD CCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217