| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241955
Identifier: 21241955
GI number: 21241955
Start: 1370688
End: 1371500
Strand: Direct
Name: 21241955
Synonym: XAC1201
Alternate gene names: NA
Gene position: 1370688-1371500 (Clockwise)
Preceding gene: 21241954
Following gene: 21241956
Centisome position: 26.48
GC content: 65.81
Gene sequence:
>813_bases TTGGAGGCGTTGTTCGACCAGTTGCACACCTTGCCCACCGTGCCCAAGGTGGCGCAAGACCTGATCCGTCAATTCGACGA TCCGCAGACCGATATCGATACGCTGGCGCACAGTATCGAGCGCGATCCGGTGATCGCCGCCAAAGTGTTGCGGCTGGCCA ATTCGGCGCGCTTCCATGGCTTGCGCGATTCCACCAGCGTGGAAGACGCGGCCATGCGGCTGGGCTTCAACACCCTGCGC ACGCTGGTGCTGGCGTCGGCGATGACTGGCGCGTTCCGGGCTGGCCCGGGCTTCGACCTCAAGGCCTTCTGGCGGCACAG TTTCGAAGTGGCCGGCATCTGCCGCCTGCTGGCGCGCCAGCAGGGGGTGGACCCGGAGACGGCCTTCACCTGCGGGATGA TGCACAACATCGGCGAGCTCTTGATCCAGTCCGGTGCGCCGGAATACGCCAGCCGCATCAATCACGAAACCTCCTCTGCC GGTCATGCGGCCGAAGAAACCCTGCAACTGGGCTTCGGCTATCCGGAAGTCGGGGCCGAGCTGGCACGGCGCTGGCAGTT GCCGGTGGTGATCCAGGAAGCCATCGGGTATCAGGTCCGGCCTGCCGCGGCCCCGGACGGTGCGCGCATGCCATTGCTGG TGGCCCAGGCGGTACTGGTCTGCGATGCGCTGCATGCGCATGGCGGCGCCAACGCGGCGGCATTGGAAGCGATACGCAGC CCGCTGATGGACGGCGTGGATCTGGACGCGTTGTTCGCCGCGTTGCCGGAGGTCATCGAGGCAGATCGCGCCTTTGCCGA GTTGCTGCACTAA
Upstream 100 bases:
>100_bases ATCCTGCCGTCGGTCATTGGCAGTAAGCCGGTCCGTGCTACACCATGCAGGTCCGCGCAGCCGCGCTGGCTTGTCTTTCA CCCACGAGGCGATCATGAAG
Downstream 100 bases:
>100_bases CCCTGGGCAGGACGCTGCGTCATTCCCCGCGTAGCGGCGCATGCGCAGTCTGTTGCGCCTTGCGTCGCACGCGCGGTGTC GGGCCGCTGCATGCGGTGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MEALFDQLHTLPTVPKVAQDLIRQFDDPQTDIDTLAHSIERDPVIAAKVLRLANSARFHGLRDSTSVEDAAMRLGFNTLR TLVLASAMTGAFRAGPGFDLKAFWRHSFEVAGICRLLARQQGVDPETAFTCGMMHNIGELLIQSGAPEYASRINHETSSA GHAAEETLQLGFGYPEVGAELARRWQLPVVIQEAIGYQVRPAAAPDGARMPLLVAQAVLVCDALHAHGGANAAALEAIRS PLMDGVDLDALFAALPEVIEADRAFAELLH
Sequences:
>Translated_270_residues MEALFDQLHTLPTVPKVAQDLIRQFDDPQTDIDTLAHSIERDPVIAAKVLRLANSARFHGLRDSTSVEDAAMRLGFNTLR TLVLASAMTGAFRAGPGFDLKAFWRHSFEVAGICRLLARQQGVDPETAFTCGMMHNIGELLIQSGAPEYASRINHETSSA GHAAEETLQLGFGYPEVGAELARRWQLPVVIQEAIGYQVRPAAAPDGARMPLLVAQAVLVCDALHAHGGANAAALEAIRS PLMDGVDLDALFAALPEVIEADRAFAELLH >Mature_270_residues MEALFDQLHTLPTVPKVAQDLIRQFDDPQTDIDTLAHSIERDPVIAAKVLRLANSARFHGLRDSTSVEDAAMRLGFNTLR TLVLASAMTGAFRAGPGFDLKAFWRHSFEVAGICRLLARQQGVDPETAFTCGMMHNIGELLIQSGAPEYASRINHETSSA GHAAEETLQLGFGYPEVGAELARRWQLPVVIQEAIGYQVRPAAAPDGARMPLLVAQAVLVCDALHAHGGANAAALEAIRS PLMDGVDLDALFAALPEVIEADRAFAELLH
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR013976 [H]
Pfam domain/function: PF02518 HATPase_c; PF08668 HDOD [H]
EC number: NA
Molecular weight: Translated: 29108; Mature: 29108
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALFDQLHTLPTVPKVAQDLIRQFDDPQTDIDTLAHSIERDPVIAAKVLRLANSARFHG CHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC LRDSTSVEDAAMRLGFNTLRTLVLASAMTGAFRAGPGFDLKAFWRHSFEVAGICRLLARQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHH QGVDPETAFTCGMMHNIGELLIQSGAPEYASRINHETSSAGHAAEETLQLGFGYPEVGAE CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH LARRWQLPVVIQEAIGYQVRPAAAPDGARMPLLVAQAVLVCDALHAHGGANAAALEAIRS HHHHCCCHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH PLMDGVDLDALFAALPEVIEADRAFAELLH HHHCCCCHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MEALFDQLHTLPTVPKVAQDLIRQFDDPQTDIDTLAHSIERDPVIAAKVLRLANSARFHG CHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC LRDSTSVEDAAMRLGFNTLRTLVLASAMTGAFRAGPGFDLKAFWRHSFEVAGICRLLARQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCHHHHHHHHHHHHH QGVDPETAFTCGMMHNIGELLIQSGAPEYASRINHETSSAGHAAEETLQLGFGYPEVGAE CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHH LARRWQLPVVIQEAIGYQVRPAAAPDGARMPLLVAQAVLVCDALHAHGGANAAALEAIRS HHHHCCCHHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH PLMDGVDLDALFAALPEVIEADRAFAELLH HHHCCCCHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]