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The map label for this gene is yagT [H]

Identifier: 21241943

GI number: 21241943

Start: 1357572

End: 1358150

Strand: Reverse

Name: yagT [H]

Synonym: XAC1189

Alternate gene names: 21241943

Gene position: 1358150-1357572 (Counterclockwise)

Preceding gene: 21241948

Following gene: 21241942

Centisome position: 26.24

GC content: 66.49

Gene sequence:

>579_bases
ATGACTGCCACACCCGCCACTGCCCATGACACGGCGCCGGCCACTGCCACCACCAGTGCGCCGACCTACCCGGTCAACCT
GCGCATCAACGGTCAGCCGTATCACTTGCAGCTCGAAGCCTGGGTGAGCCTGCTCGACCTGCTGCGCGACCGCCTCGACC
TCACCGGCACCAAGAAAGGTTGCGACCATGGCCAATGCGGCGCTTGCACGGTGCTGGTCGATGGCCGCCGCATCAACAGC
TGCCTGACCCTGGCCGTCATGCAGGACGGTGCCGACATCACCACCGTCGAGGGGCTGGCCGATGGCGACGCACTGCATCC
GCTGCAACGCGCCTTCATCGCCAACGACGCATTTCAGTGCGGTTACTGCACCCCGGGGCAGCTGTGCTCGGCCGTGGGCT
TGATCAACGAAGGCAAGGCGCACGACCGCGACCAGGTGCGTGAACTGATGAGCGGCAATATCTGCCGCTGCGGTGCCTAT
CCGCAGATCACCGATGCCGTGATGGAGGTGATGGGCAAGCCCAGCGACAGCAGCGACAGCGCGGCCACCCCGTGGACGCC
CGGGACGGTGCCGGCATGA

Upstream 100 bases:

>100_bases
CGTGTTGTATCGCCGCCAATCGCAGCCGTGGTCACTTTGCGTTGACCACAGCGCCGTCAAGGTGGTGGTCCTTCTCCTCA
GCCATCGCCACGGGGTTCGC

Downstream 100 bases:

>100_bases
TTCCGCTCACCTATACACGCCCGGACACCGTCGATGCCGCACTCGGCGCGATTGCAGTGCGCAGCGGCGACACGCAGCCG
GTGCCCTCCGAGGCACCGGT

Product: ferredoxin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MTATPATAHDTAPATATTSAPTYPVNLRINGQPYHLQLEAWVSLLDLLRDRLDLTGTKKGCDHGQCGACTVLVDGRRINS
CLTLAVMQDGADITTVEGLADGDALHPLQRAFIANDAFQCGYCTPGQLCSAVGLINEGKAHDRDQVRELMSGNICRCGAY
PQITDAVMEVMGKPSDSSDSAATPWTPGTVPA

Sequences:

>Translated_192_residues
MTATPATAHDTAPATATTSAPTYPVNLRINGQPYHLQLEAWVSLLDLLRDRLDLTGTKKGCDHGQCGACTVLVDGRRINS
CLTLAVMQDGADITTVEGLADGDALHPLQRAFIANDAFQCGYCTPGQLCSAVGLINEGKAHDRDQVRELMSGNICRCGAY
PQITDAVMEVMGKPSDSSDSAATPWTPGTVPA
>Mature_191_residues
TATPATAHDTAPATATTSAPTYPVNLRINGQPYHLQLEAWVSLLDLLRDRLDLTGTKKGCDHGQCGACTVLVDGRRINSC
LTLAVMQDGADITTVEGLADGDALHPLQRAFIANDAFQCGYCTPGQLCSAVGLINEGKAHDRDQVRELMSGNICRCGAYP
QITDAVMEVMGKPSDSSDSAATPWTPGTVPA

Specific function: Iron-sulfur subunit of the xanthine dehydrogenase complex [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=89, Percent_Identity=37.0786516853933, Blast_Score=65, Evalue=4e-11,
Organism=Escherichia coli, GI1786480, Length=183, Percent_Identity=52.4590163934426, Blast_Score=189, Evalue=1e-49,
Organism=Escherichia coli, GI1789232, Length=152, Percent_Identity=38.8157894736842, Blast_Score=112, Evalue=1e-26,
Organism=Caenorhabditis elegans, GI32566215, Length=158, Percent_Identity=31.0126582278481, Blast_Score=90, Evalue=7e-19,
Organism=Caenorhabditis elegans, GI17540638, Length=135, Percent_Identity=36.2962962962963, Blast_Score=88, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17539860, Length=158, Percent_Identity=30.379746835443, Blast_Score=88, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24647197, Length=179, Percent_Identity=34.6368715083799, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24647195, Length=179, Percent_Identity=34.6368715083799, Blast_Score=94, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24647199, Length=149, Percent_Identity=38.9261744966443, Blast_Score=91, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24647201, Length=148, Percent_Identity=37.1621621621622, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI17737937, Length=134, Percent_Identity=38.0597014925373, Blast_Score=89, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24647193, Length=156, Percent_Identity=34.6153846153846, Blast_Score=85, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002888
- InterPro:   IPR006058
- InterPro:   IPR012675
- InterPro:   IPR001041
- InterPro:   IPR006311 [H]

Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]

EC number: NA

Molecular weight: Translated: 20245; Mature: 20114

Theoretical pI: Translated: 4.73; Mature: 4.73

Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATPATAHDTAPATATTSAPTYPVNLRINGQPYHLQLEAWVSLLDLLRDRLDLTGTKKG
CCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCC
CDHGQCGACTVLVDGRRINSCLTLAVMQDGADITTVEGLADGDALHPLQRAFIANDAFQC
CCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCC
GYCTPGQLCSAVGLINEGKAHDRDQVRELMSGNICRCGAYPQITDAVMEVMGKPSDSSDS
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCC
AATPWTPGTVPA
CCCCCCCCCCCC
>Mature Secondary Structure 
TATPATAHDTAPATATTSAPTYPVNLRINGQPYHLQLEAWVSLLDLLRDRLDLTGTKKG
CCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEHHHHHHHHHHHHHHHCCCCCCCC
CDHGQCGACTVLVDGRRINSCLTLAVMQDGADITTVEGLADGDALHPLQRAFIANDAFQC
CCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCCCCCC
GYCTPGQLCSAVGLINEGKAHDRDQVRELMSGNICRCGAYPQITDAVMEVMGKPSDSSDS
CCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCEEEECCCCHHHHHHHHHHCCCCCCCCC
AATPWTPGTVPA
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]