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The map label for this gene is yagR [H]

Identifier: 21241941

GI number: 21241941

Start: 1354217

End: 1356514

Strand: Reverse

Name: yagR [H]

Synonym: XAC1187

Alternate gene names: 21241941

Gene position: 1356514-1354217 (Counterclockwise)

Preceding gene: 21241942

Following gene: 21241938

Centisome position: 26.21

GC content: 64.36

Gene sequence:

>2298_bases
ATGAACGCACGCAGCACCGACCTGTCCGACAGCGAGCTGACCCCGCCGGTTGCCGACAGCGGCACCGGCTATCGCCCCAC
CGGCACCGGCGTCACGCGCATCGACGGACGCGCAAAAGTCACCGGACAGGCACGTTATGCCGCCGAATGGCCGGTGCCGG
ATCTGGCCTATGGCGTGGTGGTCAACAGCAGCATTGCCAAGGGTGAGATCGTTGCCTTCCATCTGGATGCAGCACGCGCA
GTCCCCGGCGTGCTGGAGATCGTCACCCACGAGAACCGCCCGCATATGCGCGGCATGGACCTGTTCTACAAGGACATGAC
GGCGCCGGCCGGTTCGCCGTTCCGTCCGTTGTACGACAACAAGGTCTTGTACAGCGGCCAGCCCATCGCGCTGGTGGTTG
CCGAGACCTTCGAAGCGGCGCGCCATGCGGCGCACCTGGTGGAAGTGGAGTTGCTGCAGGATCCACACGACACCAACCTG
ATGACCAACCTGGACCGTGCGCACAAACCCAGGCCGTTGAAGGCCGGCTTTTCGCCGCCGCCCAAGGACAAGGGCGATCC
GCAGAGCGGATTCGACAATGCCGCGTGCCAGGTACAGGCCGACTACTACAGCGGCGTCGAGCACCACAACCCGATGGAGT
TGTTCGCTTCCACCGTCATCCGCGATGCCGACGGCCACTTCACCATTTACGACAAAACCCAGGGGTCGCAGAACAGCCGT
TGGTACGTGTCGCACGTGTTTGGGCTCAGCAAGCGCAAGGTGACCGTGCGCAACCCGTACGTGGGCGGCGCGTTCGGCTC
CGGGCTGCGCCCGCAGTATCAACTGCCACTGGCGGTGATGGCGTCGATCCTGCTGGATCGATCGGTCCGTGTGGTGCTGA
CACGGCAACAGATGTTCACCTTCGGCCACCGCCCGGAAACGCTGCAGCGGCTCAAGCTCGGCGCAGACCGCGACGGCACC
TTGCGCTCGGTCTGGCATGAAGCCATCGCCGAAACCTCGCGCATCGAAGACTACGTGGAGGTGGTGGTCAACTGGAGCGG
GCAGTTGTATGCCTGCGACAACGTGCACCTGGGCTACAAGTTGGTGAGTCTGGACCAATACAGCCCGATCGACATGCGGG
CGCCCGGCGCCGCGCATGGTGTGCATGCGCTGGAAGTGGCGATGGACGAGTTGGCCTATGAGGTCGGCATCGATCCGTTG
GCACTGCGCCTGAAGAACTACGCCGAGGTCAACCCGGCCGACGACAAGCCCTACTCCACCAAGGCGCTGCGCCAGTGTTA
CGAGCAAGGGGCAGAGCGCTTCGGTTGGGCGCAACGCCCCTTGCAACCGCGCGCCCGCAAGGAAGGCAGCGAGTGGGTGG
GCTGGGGCATGGCCACCGGGCAATGGGACGCGATGCAGATGTTCGCGCGCGCTCATGCAGCGCTGCATGCCGACGGCCGT
TTGGTGGTCAGCAGCGCGGCCAGCGATATCGGCACCGGTACCTACACGGTGATGGCGATGATCGCTGCCGAAGCATTAGG
CCTGCCGTTGGAGCAGGTGACGTTTCAACTTGGCGACTCCACCTTGCCGGTTGCGCCGATCGAAGGCGGCTCCTCGCACG
TCACCACGGTGGGATCGGCAGTGGATGGCGTGTGCGCGAAGCTGCGCGCGCGCCTGTTGCGCCTGGCCCAGGCCCTGCCA
GAGTCGCGCTTTGCCAAGGCCAGAACTGACGATGTGGTCTTTGCAGACGGCAAGCTGGCATTGCGGGCCGATGCCAGCAG
CGCCCTCGCCTTGACCGACCTGCTGCGCACTGCAGGGCTGGAGCAGATCGAAGATAAATTCCTCCTGCTACCGAACGTAC
TCAAGCAACGCAAATACACCCGTGCCACGCACGGCGCCGTGTTTGTGGAGGTCCGGGTGGACGAAGAACTGGGCACGGTG
CGAGTCACCCGCGTGGTCAGCGCCATTGCCGCCGGGCGCATCCTCAATCCGATCACCGCACGTAGCCAGATCGTTGGTGG
CGTGGTCTGGGGCATTGGCCAGGCGCTGCACGAGCACACCCAATCGGACCATCGCTTCGGCCGCTTCATGAATCACGACC
TGGCGCTGTATCACGTCTCCGCCAACGCCGACATTCACGACATCGATGTGATCTTCGCGGACGAAGACGACCGCGTCGTG
AGCAGCCTGGGTGCGAAAGGTGTTGGCGAAATCGGTTTGGTCGGCGTTTCGGCGGCGATCTGCAACGCCATCTTCCACGC
CACCGGCAAGCGCATCCGCAGCACGCCGATGACACCGGACAAGGTGATGGCGGACTGA

Upstream 100 bases:

>100_bases
AGCTGCCGCTGGCACGTCGCGCCATCGTGCGCGCATTGAGCGTTGCACGCGAGGGCACCATCGACAACCGCGGGCGCACC
AGTGCGCTGGAGGAATCGCC

Downstream 100 bases:

>100_bases
CCTGCATTGCACGTTGCGCTTGCAGGGGATGCTTGGCACTGCGTGAAGTGAAATGAAGTGAATGAAGTGATCCCAATCAT
CGGGCCCAATGCATCGCTGC

Product: hydroxylase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 765; Mature: 765

Protein sequence:

>765_residues
MNARSTDLSDSELTPPVADSGTGYRPTGTGVTRIDGRAKVTGQARYAAEWPVPDLAYGVVVNSSIAKGEIVAFHLDAARA
VPGVLEIVTHENRPHMRGMDLFYKDMTAPAGSPFRPLYDNKVLYSGQPIALVVAETFEAARHAAHLVEVELLQDPHDTNL
MTNLDRAHKPRPLKAGFSPPPKDKGDPQSGFDNAACQVQADYYSGVEHHNPMELFASTVIRDADGHFTIYDKTQGSQNSR
WYVSHVFGLSKRKVTVRNPYVGGAFGSGLRPQYQLPLAVMASILLDRSVRVVLTRQQMFTFGHRPETLQRLKLGADRDGT
LRSVWHEAIAETSRIEDYVEVVVNWSGQLYACDNVHLGYKLVSLDQYSPIDMRAPGAAHGVHALEVAMDELAYEVGIDPL
ALRLKNYAEVNPADDKPYSTKALRQCYEQGAERFGWAQRPLQPRARKEGSEWVGWGMATGQWDAMQMFARAHAALHADGR
LVVSSAASDIGTGTYTVMAMIAAEALGLPLEQVTFQLGDSTLPVAPIEGGSSHVTTVGSAVDGVCAKLRARLLRLAQALP
ESRFAKARTDDVVFADGKLALRADASSALALTDLLRTAGLEQIEDKFLLLPNVLKQRKYTRATHGAVFVEVRVDEELGTV
RVTRVVSAIAAGRILNPITARSQIVGGVVWGIGQALHEHTQSDHRFGRFMNHDLALYHVSANADIHDIDVIFADEDDRVV
SSLGAKGVGEIGLVGVSAAICNAIFHATGKRIRSTPMTPDKVMAD

Sequences:

>Translated_765_residues
MNARSTDLSDSELTPPVADSGTGYRPTGTGVTRIDGRAKVTGQARYAAEWPVPDLAYGVVVNSSIAKGEIVAFHLDAARA
VPGVLEIVTHENRPHMRGMDLFYKDMTAPAGSPFRPLYDNKVLYSGQPIALVVAETFEAARHAAHLVEVELLQDPHDTNL
MTNLDRAHKPRPLKAGFSPPPKDKGDPQSGFDNAACQVQADYYSGVEHHNPMELFASTVIRDADGHFTIYDKTQGSQNSR
WYVSHVFGLSKRKVTVRNPYVGGAFGSGLRPQYQLPLAVMASILLDRSVRVVLTRQQMFTFGHRPETLQRLKLGADRDGT
LRSVWHEAIAETSRIEDYVEVVVNWSGQLYACDNVHLGYKLVSLDQYSPIDMRAPGAAHGVHALEVAMDELAYEVGIDPL
ALRLKNYAEVNPADDKPYSTKALRQCYEQGAERFGWAQRPLQPRARKEGSEWVGWGMATGQWDAMQMFARAHAALHADGR
LVVSSAASDIGTGTYTVMAMIAAEALGLPLEQVTFQLGDSTLPVAPIEGGSSHVTTVGSAVDGVCAKLRARLLRLAQALP
ESRFAKARTDDVVFADGKLALRADASSALALTDLLRTAGLEQIEDKFLLLPNVLKQRKYTRATHGAVFVEVRVDEELGTV
RVTRVVSAIAAGRILNPITARSQIVGGVVWGIGQALHEHTQSDHRFGRFMNHDLALYHVSANADIHDIDVIFADEDDRVV
SSLGAKGVGEIGLVGVSAAICNAIFHATGKRIRSTPMTPDKVMAD
>Mature_765_residues
MNARSTDLSDSELTPPVADSGTGYRPTGTGVTRIDGRAKVTGQARYAAEWPVPDLAYGVVVNSSIAKGEIVAFHLDAARA
VPGVLEIVTHENRPHMRGMDLFYKDMTAPAGSPFRPLYDNKVLYSGQPIALVVAETFEAARHAAHLVEVELLQDPHDTNL
MTNLDRAHKPRPLKAGFSPPPKDKGDPQSGFDNAACQVQADYYSGVEHHNPMELFASTVIRDADGHFTIYDKTQGSQNSR
WYVSHVFGLSKRKVTVRNPYVGGAFGSGLRPQYQLPLAVMASILLDRSVRVVLTRQQMFTFGHRPETLQRLKLGADRDGT
LRSVWHEAIAETSRIEDYVEVVVNWSGQLYACDNVHLGYKLVSLDQYSPIDMRAPGAAHGVHALEVAMDELAYEVGIDPL
ALRLKNYAEVNPADDKPYSTKALRQCYEQGAERFGWAQRPLQPRARKEGSEWVGWGMATGQWDAMQMFARAHAALHADGR
LVVSSAASDIGTGTYTVMAMIAAEALGLPLEQVTFQLGDSTLPVAPIEGGSSHVTTVGSAVDGVCAKLRARLLRLAQALP
ESRFAKARTDDVVFADGKLALRADASSALALTDLLRTAGLEQIEDKFLLLPNVLKQRKYTRATHGAVFVEVRVDEELGTV
RVTRVVSAIAAGRILNPITARSQIVGGVVWGIGQALHEHTQSDHRFGRFMNHDLALYHVSANADIHDIDVIFADEDDRVV
SSLGAKGVGEIGLVGVSAAICNAIFHATGKRIRSTPMTPDKVMAD

Specific function: Unknown

COG id: COG1529

COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI71773480, Length=779, Percent_Identity=24.00513478819, Blast_Score=116, Evalue=7e-26,
Organism=Homo sapiens, GI91823271, Length=773, Percent_Identity=22.6390685640362, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI1786478, Length=735, Percent_Identity=38.5034013605442, Blast_Score=415, Evalue=1e-117,
Organism=Escherichia coli, GI1789230, Length=759, Percent_Identity=28.5902503293808, Blast_Score=221, Evalue=1e-58,
Organism=Escherichia coli, GI1789246, Length=774, Percent_Identity=26.3565891472868, Blast_Score=153, Evalue=5e-38,
Organism=Drosophila melanogaster, GI24647193, Length=745, Percent_Identity=21.744966442953, Blast_Score=105, Evalue=1e-22,
Organism=Drosophila melanogaster, GI24647201, Length=696, Percent_Identity=22.1264367816092, Blast_Score=98, Evalue=2e-20,
Organism=Drosophila melanogaster, GI17737937, Length=741, Percent_Identity=24.2914979757085, Blast_Score=92, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000674
- InterPro:   IPR008274 [H]

Pfam domain/function: PF01315 Ald_Xan_dh_C; PF02738 Ald_Xan_dh_C2 [H]

EC number: =1.17.1.4 [H]

Molecular weight: Translated: 83286; Mature: 83286

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNARSTDLSDSELTPPVADSGTGYRPTGTGVTRIDGRAKVTGQARYAAEWPVPDLAYGVV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEECCCCCCCEEHEE
VNSSIAKGEIVAFHLDAARAVPGVLEIVTHENRPHMRGMDLFYKDMTAPAGSPFRPLYDN
EECCCCCCCEEEEEECHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
KVLYSGQPIALVVAETFEAARHAAHLVEVELLQDPHDTNLMTNLDRAHKPRPLKAGFSPP
EEEECCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCHHHCCHHHCCCCCCCCCCCCC
PKDKGDPQSGFDNAACQVQADYYSGVEHHNPMELFASTVIRDADGHFTIYDKTQGSQNSR
CCCCCCCCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
WYVSHVFGLSKRKVTVRNPYVGGAFGSGLRPQYQLPLAVMASILLDRSVRVVLTRQQMFT
EEEEEHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEHHHHHH
FGHRPETLQRLKLGADRDGTLRSVWHEAIAETSRIEDYVEVVVNWSGQLYACDNVHLGYK
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEECEE
LVSLDQYSPIDMRAPGAAHGVHALEVAMDELAYEVGIDPLALRLKNYAEVNPADDKPYST
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH
KALRQCYEQGAERFGWAQRPLQPRARKEGSEWVGWGMATGQWDAMQMFARAHAALHADGR
HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCE
LVVSSAASDIGTGTYTVMAMIAAEALGLPLEQVTFQLGDSTLPVAPIEGGSSHVTTVGSA
EEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCEEEHHHH
VDGVCAKLRARLLRLAQALPESRFAKARTDDVVFADGKLALRADASSALALTDLLRTAGL
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCH
EQIEDKFLLLPNVLKQRKYTRATHGAVFVEVRVDEELGTVRVTRVVSAIAAGRILNPITA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHH
RSQIVGGVVWGIGQALHEHTQSDHRFGRFMNHDLALYHVSANADIHDIDVIFADEDDRVV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCHHHH
SSLGAKGVGEIGLVGVSAAICNAIFHATGKRIRSTPMTPDKVMAD
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCC
>Mature Secondary Structure
MNARSTDLSDSELTPPVADSGTGYRPTGTGVTRIDGRAKVTGQARYAAEWPVPDLAYGVV
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEEECCEEEEECCCCCCCEEHEE
VNSSIAKGEIVAFHLDAARAVPGVLEIVTHENRPHMRGMDLFYKDMTAPAGSPFRPLYDN
EECCCCCCCEEEEEECHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCC
KVLYSGQPIALVVAETFEAARHAAHLVEVELLQDPHDTNLMTNLDRAHKPRPLKAGFSPP
EEEECCCCEEEEEHHHHHHHHHHHHHEEEEECCCCCCCCHHHCCHHHCCCCCCCCCCCCC
PKDKGDPQSGFDNAACQVQADYYSGVEHHNPMELFASTVIRDADGHFTIYDKTQGSQNSR
CCCCCCCCCCCCCCEEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCC
WYVSHVFGLSKRKVTVRNPYVGGAFGSGLRPQYQLPLAVMASILLDRSVRVVLTRQQMFT
EEEEEHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEHHHHHH
FGHRPETLQRLKLGADRDGTLRSVWHEAIAETSRIEDYVEVVVNWSGQLYACDNVHLGYK
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCEECEE
LVSLDQYSPIDMRAPGAAHGVHALEVAMDELAYEVGIDPLALRLKNYAEVNPADDKPYST
EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCH
KALRQCYEQGAERFGWAQRPLQPRARKEGSEWVGWGMATGQWDAMQMFARAHAALHADGR
HHHHHHHHHHHHHCCCCCCCCCCHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCE
LVVSSAASDIGTGTYTVMAMIAAEALGLPLEQVTFQLGDSTLPVAPIEGGSSHVTTVGSA
EEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCEEECCCCCCCEEEHHHH
VDGVCAKLRARLLRLAQALPESRFAKARTDDVVFADGKLALRADASSALALTDLLRTAGL
HHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCEEEEECCCHHHHHHHHHHHCCH
EQIEDKFLLLPNVLKQRKYTRATHGAVFVEVRVDEELGTVRVTRVVSAIAAGRILNPITA
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCHHH
RSQIVGGVVWGIGQALHEHTQSDHRFGRFMNHDLALYHVSANADIHDIDVIFADEDDRVV
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCEEEEEEECCCCEEEEEEEEECCCHHHH
SSLGAKGVGEIGLVGVSAAICNAIFHATGKRIRSTPMTPDKVMAD
HHHCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]