| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241921
Identifier: 21241921
GI number: 21241921
Start: 1329968
End: 1330660
Strand: Direct
Name: 21241921
Synonym: XAC1167
Alternate gene names: NA
Gene position: 1329968-1330660 (Clockwise)
Preceding gene: 21241920
Following gene: 21241922
Centisome position: 25.7
GC content: 60.75
Gene sequence:
>693_bases TTGGCGATGCGCTCTGACGATCCTAATTTGCCGCACCTGCTTGTGATTGCGAATGCATTGGGCGAGCTTTGCGAACACGT AGTCTTCCTCGGCGGAGCAGTTGTTGGCCTGCTGGTATCCGATCCATTGGCGGAAAGCGTCCGCGCCACCTATGACGTCG ATGCGGTGGTCAATCTTGATTGGGCCCGATTCCGCGGTATCGAGGCGCGCGTGGAATCTCAGGGATTTGCGCGCGAGATG CGCAGCGGTGTCGTCTGCCGCTGGGTACACCAAGCGTCGGGCATCCTCTTCGACCTAATGCCGGTGGATGCCGGCGTGCT TGGCTTCTCCAACCGCTGGTACGCCCATGCTGTAGAGACGGCCCAAGTGGTGGCCTTGAGTGATCGCCTGTCCATCCGCT TGGTGACAGCCACAGCATTCGTCGCGACCAAGCTCGAAGCCTTCGCTACCCGAGGCAACAGCGACTTTCTTTCCAGTCAC GACCTGGAGGACGTCCTCAATGTCGTCGATGGCCGGGCCGAGCTGGTGGAAGAGTTTGCCGTGGAGCATGCAGACTTTCG GCATTGGGCTGCCGACGTGTTCGTGGGGCTGGTGGATAACCCGGCGTTTGTGAACGCGTTGCCGGGATTGGTCGCCGAAC CGGAGCGCGCAAGCGTCGTGCTTCAACGCCTACGCACCATTGCATCAGCGTAG
Upstream 100 bases:
>100_bases CCTGCCTTGCACCAACTGCTGGCGCTGCAGGACGCCCTACGCAGCGGGCGTGCCCGCGAGCGCACGCTGGCAGCGAGCTA TCTCAAACAATTGCTGAGGC
Downstream 100 bases:
>100_bases CTGCGACATCGTGGGCTTAGGTCTGCAAAGAAAACCTTGAAGCACCACCACCCGCTTGCGATGATGCATCGCAATTGCAA CGCACTGGGCCTGCCATGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MAMRSDDPNLPHLLVIANALGELCEHVVFLGGAVVGLLVSDPLAESVRATYDVDAVVNLDWARFRGIEARVESQGFAREM RSGVVCRWVHQASGILFDLMPVDAGVLGFSNRWYAHAVETAQVVALSDRLSIRLVTATAFVATKLEAFATRGNSDFLSSH DLEDVLNVVDGRAELVEEFAVEHADFRHWAADVFVGLVDNPAFVNALPGLVAEPERASVVLQRLRTIASA
Sequences:
>Translated_230_residues MAMRSDDPNLPHLLVIANALGELCEHVVFLGGAVVGLLVSDPLAESVRATYDVDAVVNLDWARFRGIEARVESQGFAREM RSGVVCRWVHQASGILFDLMPVDAGVLGFSNRWYAHAVETAQVVALSDRLSIRLVTATAFVATKLEAFATRGNSDFLSSH DLEDVLNVVDGRAELVEEFAVEHADFRHWAADVFVGLVDNPAFVNALPGLVAEPERASVVLQRLRTIASA >Mature_229_residues AMRSDDPNLPHLLVIANALGELCEHVVFLGGAVVGLLVSDPLAESVRATYDVDAVVNLDWARFRGIEARVESQGFAREMR SGVVCRWVHQASGILFDLMPVDAGVLGFSNRWYAHAVETAQVVALSDRLSIRLVTATAFVATKLEAFATRGNSDFLSSHD LEDVLNVVDGRAELVEEFAVEHADFRHWAADVFVGLVDNPAFVNALPGLVAEPERASVVLQRLRTIASA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24993; Mature: 24861
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMRSDDPNLPHLLVIANALGELCEHVVFLGGAVVGLLVSDPLAESVRATYDVDAVVNLD CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEECC WARFRGIEARVESQGFAREMRSGVVCRWVHQASGILFDLMPVDAGVLGFSNRWYAHAVET HHHHCCHHHHHHHHHHHHHHHCCHHEEHHHHHCCCEEEEEECCCCEECCCCCHHHHHHHH AQVVALSDRLSIRLVTATAFVATKLEAFATRGNSDFLSSHDLEDVLNVVDGRAELVEEFA HHEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH VEHADFRHWAADVFVGLVDNPAFVNALPGLVAEPERASVVLQRLRTIASA HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure AMRSDDPNLPHLLVIANALGELCEHVVFLGGAVVGLLVSDPLAESVRATYDVDAVVNLD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHEEECC WARFRGIEARVESQGFAREMRSGVVCRWVHQASGILFDLMPVDAGVLGFSNRWYAHAVET HHHHCCHHHHHHHHHHHHHHHCCHHEEHHHHHCCCEEEEEECCCCEECCCCCHHHHHHHH AQVVALSDRLSIRLVTATAFVATKLEAFATRGNSDFLSSHDLEDVLNVVDGRAELVEEFA HHEEEEECCCEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHH VEHADFRHWAADVFVGLVDNPAFVNALPGLVAEPERASVVLQRLRTIASA HHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA