| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241918
Identifier: 21241918
GI number: 21241918
Start: 1327709
End: 1329022
Strand: Direct
Name: 21241918
Synonym: XAC1164
Alternate gene names: NA
Gene position: 1327709-1329022 (Clockwise)
Preceding gene: 21241917
Following gene: 77748562
Centisome position: 25.65
GC content: 64.69
Gene sequence:
>1314_bases GTGGCGCTGTTCAACGCCAACCGTCCAGCAGATGCCGTGGCATTGCTGGAACGACATCGGCAGGGGCAGCCAGAGGTCGT GCAAGAAAGCTTGGATCGCTATGTCGGCACCCAGGCGCAGCGCGGTATCGCCGCCGGTGCAGAGCGCTCGCAGGCACCAG GCGTTGCTGCAGCGCTACAGCGGTTGCAAGGCATCCAGACTACGGCGCCGCGGTTTCCATCCGAAGATGAGATGGCCGCA CTCGCCGACAGCCAGAAGTACGACGTCTACGCAAGCATCGCGCAGGCTCGTGGCAACGCGGCAGCGGATCAAGCGCTGGC AACGCCAGGGCAACGGGTGATTCTTGGGCTACGTCAAGAGAACTCCACACTCGACGCGATGGAGGATTCGGCCCATCCAA CCCGACGGCGGGCAGATAACCCGGCGACTGCGCGCGATGAGTCGCGCGGCGGCAGCGGCGTCTACAACGATCGTCTGGTC GTTCTTTGGAAGGATGTGGACGGCACCGCACATGTGGTTGAGTCCAATCGCGCCAATACGGAGCCTACTGCGCAATACGA CCACCATGCCGGCAATACGGGAGCCAGGCCGCTGGGCGAAGGCGGCCGCGAGAACCGTAGATTCGATCCATCTCCAGGAT TTGAAAGTATTACGCGGCCCCGCAAGATCGAAGGCGACGATGTCAACGCGGACGGTGTGCGTGACCTTGGACGTCTGCGC GAAGGCACGATCGAAATGCAGGGTGCGCAGCATCCCAATCCCTTGCTGGCCGGGACTATGGACAGCGCACTGAGGCCGAC CCAGGCCGCAGTCGCCGCAGGGCGCGGCATGGTGCAGCGGGACAGCAACGCCGACGGCTGGTTCGACCAGACCGATGTCA ATGGCACGCAGGATCTCAACGACACGTTCAAGATCCATCGCGGATCACGTGGCAGTACCGATTCAGCCGGTTGCCAGACG ATCCACGCGGACGACTACGACGCATTCGTGAATGCGGTTCAAGGCAACCCCGCACAGACGCGCTGGCAATACGTGCTGAC CAGCACCACACCCGGGCCGGTGCGGGAGCAGCAACGGGACCAAGGGAGGGGGAATGAAGGGGCGCAGCCAGGGGAGGAAG AGCGTGGTCATCCGCCGGCCCAGCCGCAGCGGCAGAACGGCGGGCCTGCAGCGCCGGTGCCTGGGAGGCCACGACAGGCA GACGCAGAAGACGCCCACCCGCGCCTCATCCATTGCATGCACAGGCCAGCACCTTGGTTGGCCGGTTGGACGCCAGCATG GGTCGCGCCAGCGATGCGCACAGCGAGCGGATGA
Upstream 100 bases:
>100_bases ACAGCAGGGGCGATCGCTTTGTAACTCCTTAATCCATGCAGGGGGACCACAGACGGCAAGGGTCATAGAGTTCAATATCA AAGGAAGCGCAGACGACGTT
Downstream 100 bases:
>100_bases GCGCCAGCCTGGCCCATCTGGCAAAGGAGCACGGGCTCGAGCGCATCGACCACGTAATGCTGAGCAACCAAACGCCGCGT GCAGCGGCCGCTGCCACCGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MALFNANRPADAVALLERHRQGQPEVVQESLDRYVGTQAQRGIAAGAERSQAPGVAAALQRLQGIQTTAPRFPSEDEMAA LADSQKYDVYASIAQARGNAAADQALATPGQRVILGLRQENSTLDAMEDSAHPTRRRADNPATARDESRGGSGVYNDRLV VLWKDVDGTAHVVESNRANTEPTAQYDHHAGNTGARPLGEGGRENRRFDPSPGFESITRPRKIEGDDVNADGVRDLGRLR EGTIEMQGAQHPNPLLAGTMDSALRPTQAAVAAGRGMVQRDSNADGWFDQTDVNGTQDLNDTFKIHRGSRGSTDSAGCQT IHADDYDAFVNAVQGNPAQTRWQYVLTSTTPGPVREQQRDQGRGNEGAQPGEEERGHPPAQPQRQNGGPAAPVPGRPRQA DAEDAHPRLIHCMHRPAPWLAGWTPAWVAPAMRTASG
Sequences:
>Translated_437_residues MALFNANRPADAVALLERHRQGQPEVVQESLDRYVGTQAQRGIAAGAERSQAPGVAAALQRLQGIQTTAPRFPSEDEMAA LADSQKYDVYASIAQARGNAAADQALATPGQRVILGLRQENSTLDAMEDSAHPTRRRADNPATARDESRGGSGVYNDRLV VLWKDVDGTAHVVESNRANTEPTAQYDHHAGNTGARPLGEGGRENRRFDPSPGFESITRPRKIEGDDVNADGVRDLGRLR EGTIEMQGAQHPNPLLAGTMDSALRPTQAAVAAGRGMVQRDSNADGWFDQTDVNGTQDLNDTFKIHRGSRGSTDSAGCQT IHADDYDAFVNAVQGNPAQTRWQYVLTSTTPGPVREQQRDQGRGNEGAQPGEEERGHPPAQPQRQNGGPAAPVPGRPRQA DAEDAHPRLIHCMHRPAPWLAGWTPAWVAPAMRTASG >Mature_436_residues ALFNANRPADAVALLERHRQGQPEVVQESLDRYVGTQAQRGIAAGAERSQAPGVAAALQRLQGIQTTAPRFPSEDEMAAL ADSQKYDVYASIAQARGNAAADQALATPGQRVILGLRQENSTLDAMEDSAHPTRRRADNPATARDESRGGSGVYNDRLVV LWKDVDGTAHVVESNRANTEPTAQYDHHAGNTGARPLGEGGRENRRFDPSPGFESITRPRKIEGDDVNADGVRDLGRLRE GTIEMQGAQHPNPLLAGTMDSALRPTQAAVAAGRGMVQRDSNADGWFDQTDVNGTQDLNDTFKIHRGSRGSTDSAGCQTI HADDYDAFVNAVQGNPAQTRWQYVLTSTTPGPVREQQRDQGRGNEGAQPGEEERGHPPAQPQRQNGGPAAPVPGRPRQAD AEDAHPRLIHCMHRPAPWLAGWTPAWVAPAMRTASG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47024; Mature: 46893
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALFNANRPADAVALLERHRQGQPEVVQESLDRYVGTQAQRGIAAGAERSQAPGVAAALQ CCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHH RLQGIQTTAPRFPSEDEMAALADSQKYDVYASIAQARGNAAADQALATPGQRVILGLRQE HHHCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCC NSTLDAMEDSAHPTRRRADNPATARDESRGGSGVYNDRLVVLWKDVDGTAHVVESNRANT CCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCC EPTAQYDHHAGNTGARPLGEGGRENRRFDPSPGFESITRPRKIEGDDVNADGVRDLGRLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH EGTIEMQGAQHPNPLLAGTMDSALRPTQAAVAAGRGMVQRDSNADGWFDQTDVNGTQDLN CCCEEECCCCCCCCCEECCHHHHCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCC DTFKIHRGSRGSTDSAGCQTIHADDYDAFVNAVQGNPAQTRWQYVLTSTTPGPVREQQRD CHHEEECCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH QGRGNEGAQPGEEERGHPPAQPQRQNGGPAAPVPGRPRQADAEDAHPRLIHCMHRPAPWL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC AGWTPAWVAPAMRTASG CCCCHHHHHHHHHHCCC >Mature Secondary Structure ALFNANRPADAVALLERHRQGQPEVVQESLDRYVGTQAQRGIAAGAERSQAPGVAAALQ CCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCHHHHHH RLQGIQTTAPRFPSEDEMAALADSQKYDVYASIAQARGNAAADQALATPGQRVILGLRQE HHHCCHHCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHCCCCCEEEEEECCC NSTLDAMEDSAHPTRRRADNPATARDESRGGSGVYNDRLVVLWKDVDGTAHVVESNRANT CCHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCC EPTAQYDHHAGNTGARPLGEGGRENRRFDPSPGFESITRPRKIEGDDVNADGVRDLGRLR CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHH EGTIEMQGAQHPNPLLAGTMDSALRPTQAAVAAGRGMVQRDSNADGWFDQTDVNGTQDLN CCCEEECCCCCCCCCEECCHHHHCCHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCC DTFKIHRGSRGSTDSAGCQTIHADDYDAFVNAVQGNPAQTRWQYVLTSTTPGPVREQQRD CHHEEECCCCCCCCCCCCEEEECCCHHHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH QGRGNEGAQPGEEERGHPPAQPQRQNGGPAAPVPGRPRQADAEDAHPRLIHCMHRPAPWL CCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCC AGWTPAWVAPAMRTASG CCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA