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The map label for this gene is yjgJ [H]

Identifier: 21241915

GI number: 21241915

Start: 1324558

End: 1325148

Strand: Direct

Name: yjgJ [H]

Synonym: XAC1161

Alternate gene names: 21241915

Gene position: 1324558-1325148 (Clockwise)

Preceding gene: 21241913

Following gene: 21241916

Centisome position: 25.59

GC content: 71.57

Gene sequence:

>591_bases
ATGACTACAGAGAACCCCCGGGCCCGCGGCCGGCCGCGCGCATTCGACCCGGACCAAGCGGTCGCCACTGCGCAGCAGCT
GTTTCATGCGCGCGGCTACGACGCACTGAGCGTGGCCGACCTCACCCAGGCGCTGGGCATCAACCCGCCCAGTTTCTACG
CCGCCTTCGGCAGCAAGGCCGGCCTGTATGCGCGCATCCTCGACCGCTACGCGCAGACCGGCGCCATCCCGCTGCCGCAA
CTCCTGGACACCGACCGACCGCTGTCCGACGCGCTGGCCGACGTACTGGAGCAGGCCGCCCGCTGCTACGCCGCAGATCC
CGCCGCCACCGGCTGCCTGGTGCTGGAAGGCACGCGCAGCAACGACGCGCAGGCACGCGAGGCGGCCTGCAGCTTTCATG
TCGCCGCCCAGGAGTTGATCCGCTCCCACATCGCCAAGCAGTGCCCGCACGACGCAGACCGGCTGGCGGATTTCGTCAGC
ACCACCATGGCCGGCCTGTCCGCCAGCGCCCGGCATGGGCAGAGCCTGGAGCGCCTGCTGGCGAGTGCGCGCTTGGCGGG
GGAGGGGATTCGGGCGGCGCTGCGCGACTAG

Upstream 100 bases:

>100_bases
CAATACCGACTTGTCTTTGAACGCTGACATGCATCACCTCGCAATTAATGTAGCGAGTAATACATAATATTTCTCGCCTG
CCGTCAAGGATTTTGTAACT

Downstream 100 bases:

>100_bases
GCGGGGTGCGAGTGGGCAGAAGGCTTTCGATGGTGTGAGCGCGCCTGCTCGCTAATCGAGGGTGCGCTTGCCGTTACCCA
GTACGGTCAATGGGCGGGTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MTTENPRARGRPRAFDPDQAVATAQQLFHARGYDALSVADLTQALGINPPSFYAAFGSKAGLYARILDRYAQTGAIPLPQ
LLDTDRPLSDALADVLEQAARCYAADPAATGCLVLEGTRSNDAQAREAACSFHVAAQELIRSHIAKQCPHDADRLADFVS
TTMAGLSASARHGQSLERLLASARLAGEGIRAALRD

Sequences:

>Translated_196_residues
MTTENPRARGRPRAFDPDQAVATAQQLFHARGYDALSVADLTQALGINPPSFYAAFGSKAGLYARILDRYAQTGAIPLPQ
LLDTDRPLSDALADVLEQAARCYAADPAATGCLVLEGTRSNDAQAREAACSFHVAAQELIRSHIAKQCPHDADRLADFVS
TTMAGLSASARHGQSLERLLASARLAGEGIRAALRD
>Mature_195_residues
TTENPRARGRPRAFDPDQAVATAQQLFHARGYDALSVADLTQALGINPPSFYAAFGSKAGLYARILDRYAQTGAIPLPQL
LDTDRPLSDALADVLEQAARCYAADPAATGCLVLEGTRSNDAQAREAACSFHVAAQELIRSHIAKQCPHDADRLADFVST
TMAGLSASARHGQSLERLLASARLAGEGIRAALRD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082397, Length=196, Percent_Identity=50, Blast_Score=203, Evalue=6e-54,
Organism=Escherichia coli, GI87081833, Length=198, Percent_Identity=33.8383838383838, Blast_Score=104, Evalue=4e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 20846; Mature: 20714

Theoretical pI: Translated: 6.67; Mature: 6.67

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTENPRARGRPRAFDPDQAVATAQQLFHARGYDALSVADLTQALGINPPSFYAAFGSKA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCC
GLYARILDRYAQTGAIPLPQLLDTDRPLSDALADVLEQAARCYAADPAATGCLVLEGTRS
HHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
NDAQAREAACSFHVAAQELIRSHIAKQCPHDADRLADFVSTTMAGLSASARHGQSLERLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASARLAGEGIRAALRD
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTENPRARGRPRAFDPDQAVATAQQLFHARGYDALSVADLTQALGINPPSFYAAFGSKA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHCCCC
GLYARILDRYAQTGAIPLPQLLDTDRPLSDALADVLEQAARCYAADPAATGCLVLEGTRS
HHHHHHHHHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCC
NDAQAREAACSFHVAAQELIRSHIAKQCPHDADRLADFVSTTMAGLSASARHGQSLERLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ASARLAGEGIRAALRD
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]