Definition Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome.
Accession NC_003919
Length 5,175,554

Click here to switch to the map view.

The map label for this gene is 21241904

Identifier: 21241904

GI number: 21241904

Start: 1310988

End: 1311470

Strand: Reverse

Name: 21241904

Synonym: XAC1150

Alternate gene names: NA

Gene position: 1311470-1310988 (Counterclockwise)

Preceding gene: 21241907

Following gene: 21241903

Centisome position: 25.34

GC content: 63.98

Gene sequence:

>483_bases
ATGACCATCCACGTTGGTGACCGCATTCCCGAAGTCGTGCTCAAGCGCCTGCGCGACGGCATCGAGGCCGTCGACACCCA
TAGCCTGTTCGCAGGCCGCAAGGTGCTGCTGTTCGCGGTGCCGGGGGCCTTTACCCCCACCTGCTCGGCCAAGCACCTGC
CGGGCTATGTGGAACACTTCGAGCAATTCCGCAAGCGCGGTATCGAAGTGCTGTGCACCGCGGTCAACGACCCATTCGTG
ATGCAGGCCTGGGGACGCAGCCAGTTGATTCCCGACGGCCTGCACCTGTTACCCGACGGCAACGCCGAACTGGCGCGCGC
CCTGGGCCTTGAAATCGACGCCAGCGGGTCGGGCATGGGCCTGCGCTCGCGCCGCTACGCGCTGTATGCAGACGACGCGG
TGGTCAAGGCGTTGTTTGTTGAAGAACCCGGCGAATTCAAAGTCTCTGCAGCCGATTACGTGCTGCAGCACCTGCCGGAT
TGA

Upstream 100 bases:

>100_bases
CATGTGCGTCAGATAGGCGTGGCCGGACGGATTTCAAGCGCGTTGACGCGCTTTTCCCCTGCCCCTTTCTAGAATCCGTT
CAGCCACAGGAGCCTGCCGC

Downstream 100 bases:

>100_bases
ATACCCCTTTCTCCCATCCACCCAGAAGGAAGACGGCCAGCCATGTCTGATCAGCCAGCCACCAACACTCCCGCCGGTAT
CACCGACACTGCCACCTTGC

Product: peroxiredoxin

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 160; Mature: 159

Protein sequence:

>160_residues
MTIHVGDRIPEVVLKRLRDGIEAVDTHSLFAGRKVLLFAVPGAFTPTCSAKHLPGYVEHFEQFRKRGIEVLCTAVNDPFV
MQAWGRSQLIPDGLHLLPDGNAELARALGLEIDASGSGMGLRSRRYALYADDAVVKALFVEEPGEFKVSAADYVLQHLPD

Sequences:

>Translated_160_residues
MTIHVGDRIPEVVLKRLRDGIEAVDTHSLFAGRKVLLFAVPGAFTPTCSAKHLPGYVEHFEQFRKRGIEVLCTAVNDPFV
MQAWGRSQLIPDGLHLLPDGNAELARALGLEIDASGSGMGLRSRRYALYADDAVVKALFVEEPGEFKVSAADYVLQHLPD
>Mature_159_residues
TIHVGDRIPEVVLKRLRDGIEAVDTHSLFAGRKVLLFAVPGAFTPTCSAKHLPGYVEHFEQFRKRGIEVLCTAVNDPFVM
QAWGRSQLIPDGLHLLPDGNAELARALGLEIDASGSGMGLRSRRYALYADDAVVKALFVEEPGEFKVSAADYVLQHLPD

Specific function: Unknown

COG id: COG0678

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI6912238, Length=160, Percent_Identity=38.125, Blast_Score=100, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6323138, Length=133, Percent_Identity=31.5789473684211, Blast_Score=75, Evalue=7e-15,
Organism=Drosophila melanogaster, GI78706776, Length=145, Percent_Identity=42.0689655172414, Blast_Score=109, Evalue=1e-24,
Organism=Drosophila melanogaster, GI78709078, Length=145, Percent_Identity=42.0689655172414, Blast_Score=109, Evalue=1e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013740
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF08534 Redoxin [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 17554; Mature: 17423

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHVGDRIPEVVLKRLRDGIEAVDTHSLFAGRKVLLFAVPGAFTPTCSAKHLPGYVEHF
CEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
EQFRKRGIEVLCTAVNDPFVMQAWGRSQLIPDGLHLLPDGNAELARALGLEIDASGSGMG
HHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCEECCCCCHHHHHHHCCEEECCCCCCC
LRSRRYALYADDAVVKALFVEEPGEFKVSAADYVLQHLPD
CCCCEEEEEECHHHHHHHEECCCCCEEEHHHHHHHHHCCC
>Mature Secondary Structure 
TIHVGDRIPEVVLKRLRDGIEAVDTHSLFAGRKVLLFAVPGAFTPTCSAKHLPGYVEHF
EEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCHHHHHH
EQFRKRGIEVLCTAVNDPFVMQAWGRSQLIPDGLHLLPDGNAELARALGLEIDASGSGMG
HHHHHCCCEEEEEECCCCEEEEECCCCCCCCCCCEECCCCCHHHHHHHCCEEECCCCCCC
LRSRRYALYADDAVVKALFVEEPGEFKVSAADYVLQHLPD
CCCCEEEEEECHHHHHHHEECCCCCEEEHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]