| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is yceG [C]
Identifier: 21241886
GI number: 21241886
Start: 1281557
End: 1282630
Strand: Direct
Name: yceG [C]
Synonym: XAC1131
Alternate gene names: 21241886
Gene position: 1281557-1282630 (Clockwise)
Preceding gene: 21241885
Following gene: 21241887
Centisome position: 24.76
GC content: 68.25
Gene sequence:
>1074_bases GTGGGTGTGGCGGTGACTGGCAAACGCGGATGTCTGGCCGTGCTGGGTACGGTAGTGCTGCTCGTAGCGCTGCTGGCGAT TGCCGCCGTGGTGGCGTGGCGGCATTACCTGCACTTCGCCGATACCCCCGTGCCTGCGAGCGCGCCCAGCGTGGTGATTG CGCCCGGCGATTCGCTCAAGGCTACATTGCGCAAGCTGCGCGCTGCCGGCCTGGCGCAGGGCACCGAGCTGGAATGGCAG CTGCTGGCGCGCCAGGTCGATGCGGCCGGCAAGCTCAAGGTGGGCGAGTACGCGCTGTCGCCAGCGCTGTCGCCGCGCGA ACTGCTGACGCGCATGCGCCAGGGGCGGGTGATCCAGTACCGCTTCACGATCGTGGAAGGCTGGAATTTTCGTCAGCTGC GCGCCGCACTGGCGACCGCCACGCCGCTGCAACATTCCATCGATGCGCTGGACGATGCGGCACTGATGGCCCGGCTGGGA GTTGCCAGGCAGCATCCGGAAGGGCGCTTCCTGCCGGAAACCTATGTGTACCAGCGTGGCGACAGCGATATCGATGTACT CAAGCGCGCGCATGCGGCCATGGACAAGGCATTGGCGCAGGCCTGGGAGCAGCGCGCCCCGAACCTGCCACTCGCCTCGC CGGAGCAGGCATTGATCCTGGCCTCGATCATCGAAAAAGAAACGGCCCTGGCCTCCGAGCGCCCGCTCATCGCCGGGGTG TTCCTGCGCCGCTTGCAGCTGGGCATGAAGCTGCAGACCGACCCCACCGTGATCTACGGCATCGGCAGCAGCTACGACGG CAATATCCGTCGCCGCGACCTGACCACCGATACGCCGTACAACACCTACACCCGTACCGGCCTGACGCCGACGCCGATCG CCATGCCGGGCCGCGAGGCGCTGCTGGCGGCGGTGCGGCCGGCGCCCGGCGAGGCGCTGTATTTCGTGGCGGTGGGCGAT GGCACCGGGGCGCACGCGTTCTCGGCCACGTTGGCCGAACATAACGCAGCGGTGGCGCGCTATCTGCAGCGCCGCCGGCT GCCGAGCACGCCGCAGACGGAGCCTATGCCATGA
Upstream 100 bases:
>100_bases CAAGGCGCGTGGCGTGTTGCGTGCGATCGAGCAGACATGAGCGCTTCAACGGGACATCACCGGCGCGCGGTATCCTGCGC GGCGCAGGGGCAATGACGAG
Downstream 100 bases:
>100_bases CCGCCGCATTTTCGCCCTGGCAGCAGCGCGCCTTCGACCAGACCGTGGCTGCACTGGATGCGGGGCGCCTTGGACATGGG TTGCTGATCTGCGGCCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MGVAVTGKRGCLAVLGTVVLLVALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDSLKATLRKLRAAGLAQGTELEWQ LLARQVDAAGKLKVGEYALSPALSPRELLTRMRQGRVIQYRFTIVEGWNFRQLRAALATATPLQHSIDALDDAALMARLG VARQHPEGRFLPETYVYQRGDSDIDVLKRAHAAMDKALAQAWEQRAPNLPLASPEQALILASIIEKETALASERPLIAGV FLRRLQLGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREALLAAVRPAPGEALYFVAVGD GTGAHAFSATLAEHNAAVARYLQRRRLPSTPQTEPMP
Sequences:
>Translated_357_residues MGVAVTGKRGCLAVLGTVVLLVALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDSLKATLRKLRAAGLAQGTELEWQ LLARQVDAAGKLKVGEYALSPALSPRELLTRMRQGRVIQYRFTIVEGWNFRQLRAALATATPLQHSIDALDDAALMARLG VARQHPEGRFLPETYVYQRGDSDIDVLKRAHAAMDKALAQAWEQRAPNLPLASPEQALILASIIEKETALASERPLIAGV FLRRLQLGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREALLAAVRPAPGEALYFVAVGD GTGAHAFSATLAEHNAAVARYLQRRRLPSTPQTEPMP >Mature_356_residues GVAVTGKRGCLAVLGTVVLLVALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDSLKATLRKLRAAGLAQGTELEWQL LARQVDAAGKLKVGEYALSPALSPRELLTRMRQGRVIQYRFTIVEGWNFRQLRAALATATPLQHSIDALDDAALMARLGV ARQHPEGRFLPETYVYQRGDSDIDVLKRAHAAMDKALAQAWEQRAPNLPLASPEQALILASIIEKETALASERPLIAGVF LRRLQLGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREALLAAVRPAPGEALYFVAVGDG TGAHAFSATLAEHNAAVARYLQRRRLPSTPQTEPMP
Specific function: Unknown
COG id: COG1559
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0755 family [H]
Homologues:
Organism=Escherichia coli, GI1787339, Length=322, Percent_Identity=40.0621118012422, Blast_Score=214, Evalue=9e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003770 [H]
Pfam domain/function: PF02618 ADC_lyase [H]
EC number: NA
Molecular weight: Translated: 38631; Mature: 38500
Theoretical pI: Translated: 10.09; Mature: 10.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGVAVTGKRGCLAVLGTVVLLVALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDSLK CCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH ATLRKLRAAGLAQGTELEWQLLARQVDAAGKLKVGEYALSPALSPRELLTRMRQGRVIQY HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCHHHCCCCCHHHHHHHHHHCCEEEE RFTIVEGWNFRQLRAALATATPLQHSIDALDDAALMARLGVARQHPEGRFLPETYVYQRG EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECC DSDIDVLKRAHAAMDKALAQAWEQRAPNLPLASPEQALILASIIEKETALASERPLIAGV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH FLRRLQLGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREA HHHHHHHCCEECCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCHHH LLAAVRPAPGEALYFVAVGDGTGAHAFSATLAEHNAAVARYLQRRRLPSTPQTEPMP HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure GVAVTGKRGCLAVLGTVVLLVALLAIAAVVAWRHYLHFADTPVPASAPSVVIAPGDSLK CEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHH ATLRKLRAAGLAQGTELEWQLLARQVDAAGKLKVGEYALSPALSPRELLTRMRQGRVIQY HHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCEEECCHHHCCCCCHHHHHHHHHHCCEEEE RFTIVEGWNFRQLRAALATATPLQHSIDALDDAALMARLGVARQHPEGRFLPETYVYQRG EEEEEECCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEECC DSDIDVLKRAHAAMDKALAQAWEQRAPNLPLASPEQALILASIIEKETALASERPLIAGV CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHH FLRRLQLGMKLQTDPTVIYGIGSSYDGNIRRRDLTTDTPYNTYTRTGLTPTPIAMPGREA HHHHHHHCCEECCCCEEEEECCCCCCCCEEECCCCCCCCCCCEEECCCCCCCCCCCCHHH LLAAVRPAPGEALYFVAVGDGTGAHAFSATLAEHNAAVARYLQRRRLPSTPQTEPMP HHHHCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]