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The map label for this gene is p13 [H]

Identifier: 21241825

GI number: 21241825

Start: 1220880

End: 1221329

Strand: Reverse

Name: p13 [H]

Synonym: XAC1063

Alternate gene names: 21241825

Gene position: 1221329-1220880 (Counterclockwise)

Preceding gene: 21241826

Following gene: 21241824

Centisome position: 23.6

GC content: 62.0

Gene sequence:

>450_bases
TTGAGCGAATCCATCCGCATCGCAACCCCGCTCACCAAGTTGAGTGAGGGTTTGCGCCTTCGCTCCTACGTGTGCCCAGC
CGGCAAGCTGACCATCGGATACGGCCACACAGGCTACGACGTAACCCCTGGACTGACGATCACTCAGGAGCGCGCTGATG
CGCTGCTGGAGGCCGACCTGGCAAAGGCCTTGGCCGGCGTAAGGAAGTACGTGCACGTGCCCCTCACAGCGCAGCAGGAG
GCTGCCCTAGTGGATTTCGTGTTCAACCTAGGGGCCGAGCGCCTTCGCACCTCGACCCTGCTACGTTTGCTTAACTCCGG
CAACTACGCATCAGTATCCACGCAGCTGCCACGTTGGGTGTACGGTGAGGTCAACGGCAAGGCCAAAAGGCTTCCCGGCC
TCATCGTCCGCCGCAGGGCGAACGTGGCGATGTGGGAAACGCGCTCATGA

Upstream 100 bases:

>100_bases
TCATCCGCAACCGTATCCGTAAGGCCAAGGCATCGGCCGCGACCGGCACACCTAGCGGTGGCGGCAGTTCGACTGGCACG
AAGCCGCGCAAGCAGGTCCG

Downstream 100 bases:

>100_bases
AGCGAGCTTTCTGTAAGTGCTGCAGCGAAGCCATCACTTCGTTCGGTCTTGCTACTGCTTTCCTGGTTGCGCTGAAGCAC
CTCAAGCGTCCCCTCTGATG

Product: phage-related lysozyme

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 149; Mature: 148

Protein sequence:

>149_residues
MSESIRIATPLTKLSEGLRLRSYVCPAGKLTIGYGHTGYDVTPGLTITQERADALLEADLAKALAGVRKYVHVPLTAQQE
AALVDFVFNLGAERLRTSTLLRLLNSGNYASVSTQLPRWVYGEVNGKAKRLPGLIVRRRANVAMWETRS

Sequences:

>Translated_149_residues
MSESIRIATPLTKLSEGLRLRSYVCPAGKLTIGYGHTGYDVTPGLTITQERADALLEADLAKALAGVRKYVHVPLTAQQE
AALVDFVFNLGAERLRTSTLLRLLNSGNYASVSTQLPRWVYGEVNGKAKRLPGLIVRRRANVAMWETRS
>Mature_148_residues
SESIRIATPLTKLSEGLRLRSYVCPAGKLTIGYGHTGYDVTPGLTITQERADALLEADLAKALAGVRKYVHVPLTAQQEA
ALVDFVFNLGAERLRTSTLLRLLNSGNYASVSTQLPRWVYGEVNGKAKRLPGLIVRRRANVAMWETRS

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=132, Percent_Identity=37.1212121212121, Blast_Score=83, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 16369; Mature: 16238

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSESIRIATPLTKLSEGLRLRSYVCPAGKLTIGYGHTGYDVTPGLTITQERADALLEADL
CCCCEEEECCHHHHHCCCCHHHEECCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
AKALAGVRKYVHVPLTAQQEAALVDFVFNLGAERLRTSTLLRLLNSGNYASVSTQLPRWV
HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEE
YGEVNGKAKRLPGLIVRRRANVAMWETRS
EECCCCCHHHCCHHHHHHCCCEEEEECCC
>Mature Secondary Structure 
SESIRIATPLTKLSEGLRLRSYVCPAGKLTIGYGHTGYDVTPGLTITQERADALLEADL
CCCEEEECCHHHHHCCCCHHHEECCCCCEEEECCCCCCCCCCCCEEEHHHHHHHHHHHH
AKALAGVRKYVHVPLTAQQEAALVDFVFNLGAERLRTSTLLRLLNSGNYASVSTQLPRWV
HHHHHHHHHHEECCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEECCCCCCEE
YGEVNGKAKRLPGLIVRRRANVAMWETRS
EECCCCCHHHCCHHHHHHCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]