| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241820
Identifier: 21241820
GI number: 21241820
Start: 1215729
End: 1216307
Strand: Reverse
Name: 21241820
Synonym: XAC1058
Alternate gene names: NA
Gene position: 1216307-1215729 (Counterclockwise)
Preceding gene: 21241821
Following gene: 21241817
Centisome position: 23.5
GC content: 63.73
Gene sequence:
>579_bases GTGGCGAGGCCTACGAATCGCGCGGCCACTACTTCTGGAGCCACTGACATGAGCACCATTGAGTTGCACAGCCTGACCTT CGCCGTTGAGAAGGAACACGACCACGACGCCGGCACGCCCTGGGACCGCGAGGACGGACATGGGCCTGTCTCCGGGTGGC GACACAAGCGCACCAAGCGCCCCGGTGAGCTGGTGTTGAATCAGCACAGCCCGATGGAGGTCCGCTTCTACGACTTCGCG GAAGCCTGCAAGATCGCCCTACGTGATGGCTGGGGATCGCGCTACGCCGAGCCGGGCATGAGCAAGCGCCAGATCGCCGC ACTGGCCGCCCGCGAGGACTACGAACACCTCAAGGCGTGGTGCCGCGATGGTTGGGGCTACATCGGCGTAATCGTCACGC TGCTTGATGCGGACGGCAACAAGACCGACTACAGCGATGAACTATGGGGCGTCGCGGATGACGGTTCACACGCTGACACG ATGGCTTGCGACCTCGCACTGAGTATCGGTGCGCTGGTGAACTGGGGACCGACTATTGAGCTGCCGGCGCGCACTGTCGA GTTGCGGAGGGCCGCATAA
Upstream 100 bases:
>100_bases GCCGAGCACCACGCGGACGAGACTGCGCTTCTTGAGGACGTCCCCGAGAACCTGCGGCGCTACTTTGATTACGAAAGCTA TGGCCGTGACATGCGGACGG
Downstream 100 bases:
>100_bases GCGGCTGTCACAACCAACACGCACACGGTGCTTCTGCGACAGGCGACTAGGGGCAGGGACACGTGGATTTGGCCGCCACT ATTTCCGAAATTTCTGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MARPTNRAATTSGATDMSTIELHSLTFAVEKEHDHDAGTPWDREDGHGPVSGWRHKRTKRPGELVLNQHSPMEVRFYDFA EACKIALRDGWGSRYAEPGMSKRQIAALAAREDYEHLKAWCRDGWGYIGVIVTLLDADGNKTDYSDELWGVADDGSHADT MACDLALSIGALVNWGPTIELPARTVELRRAA
Sequences:
>Translated_192_residues MARPTNRAATTSGATDMSTIELHSLTFAVEKEHDHDAGTPWDREDGHGPVSGWRHKRTKRPGELVLNQHSPMEVRFYDFA EACKIALRDGWGSRYAEPGMSKRQIAALAAREDYEHLKAWCRDGWGYIGVIVTLLDADGNKTDYSDELWGVADDGSHADT MACDLALSIGALVNWGPTIELPARTVELRRAA >Mature_191_residues ARPTNRAATTSGATDMSTIELHSLTFAVEKEHDHDAGTPWDREDGHGPVSGWRHKRTKRPGELVLNQHSPMEVRFYDFAE ACKIALRDGWGSRYAEPGMSKRQIAALAAREDYEHLKAWCRDGWGYIGVIVTLLDADGNKTDYSDELWGVADDGSHADTM ACDLALSIGALVNWGPTIELPARTVELRRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21249; Mature: 21118
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARPTNRAATTSGATDMSTIELHSLTFAVEKEHDHDAGTPWDREDGHGPVSGWRHKRTKR CCCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCC PGELVLNQHSPMEVRFYDFAEACKIALRDGWGSRYAEPGMSKRQIAALAAREDYEHLKAW CCCEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH CRDGWGYIGVIVTLLDADGNKTDYSDELWGVADDGSHADTMACDLALSIGALVNWGPTIE HHCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE LPARTVELRRAA CCCCEEEEECCC >Mature Secondary Structure ARPTNRAATTSGATDMSTIELHSLTFAVEKEHDHDAGTPWDREDGHGPVSGWRHKRTKR CCCCCCCCCCCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHCCC PGELVLNQHSPMEVRFYDFAEACKIALRDGWGSRYAEPGMSKRQIAALAAREDYEHLKAW CCCEEECCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH CRDGWGYIGVIVTLLDADGNKTDYSDELWGVADDGSHADTMACDLALSIGALVNWGPTIE HHCCCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHCCCCCEE LPARTVELRRAA CCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA