| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241818
Identifier: 21241818
GI number: 21241818
Start: 1214098
End: 1214628
Strand: Direct
Name: 21241818
Synonym: XAC1056
Alternate gene names: NA
Gene position: 1214098-1214628 (Clockwise)
Preceding gene: 21241813
Following gene: 21241819
Centisome position: 23.46
GC content: 55.37
Gene sequence:
>531_bases ATGGACGCAATCAAGGCCGCCACCGAGGAAATTGCTAAGGCTGATCGACAGATCGAGGCCTTGCTCAAGCGTCGGGATGA GCTAGTCAGCTTCTTGAATATGGCGAAGGAGTTGTTAGGTCTGCAGGTCACTTCACTGCCGACCGTCCCGCTGCCGCCTC TGCCCAAACCAATTGCACCAGGCTTACAACCTGGCGTTATTCGGACTGTAGTGCCGGCGGTCCAGGTTGCGGTCGTACCC CGGCCACTCAAGGACAGGGTAGTTGAGGCTTGCTTGGAGTTGCTGAAAGACGGATTTCCCATGAAGCCCGTGACGCTTGT TGAGGCTTTAGAGCTTCGTGGGATTGAAATTGGCGGCGCGAACAAAGCAATGTCGCTTTCTTCGATGCTGTCTAAAGATA AGCGTTTTCAGCCTGATCGAAAGTGGGGCTGGAGCCTGAAGCGAGCCCCCTCTCCAGTTGCAGCTGGAGAGGGAGGTAAT ACTAAACAGGGTGAGACCCCTGACGCAGACAGCAGCGACAATGAGCTGTGA
Upstream 100 bases:
>100_bases GGAGTCAGTGAGTTACTTTCCATTCATTTGTGAACGGAATATAAACTATGAAAGTTGTCAACTCTTCTAGAGATCTTCGT ATGCGTTTAGAGTTCGTTAC
Downstream 100 bases:
>100_bases GGAGGTACGAGATATGGCACACATTCACCATATGACCTTAAGAGTCTAAGGTGGTTCATAGGCCCTGACGTTAGCGTCGG GGCCTATTCTTTGGTGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MDAIKAATEEIAKADRQIEALLKRRDELVSFLNMAKELLGLQVTSLPTVPLPPLPKPIAPGLQPGVIRTVVPAVQVAVVP RPLKDRVVEACLELLKDGFPMKPVTLVEALELRGIEIGGANKAMSLSSMLSKDKRFQPDRKWGWSLKRAPSPVAAGEGGN TKQGETPDADSSDNEL
Sequences:
>Translated_176_residues MDAIKAATEEIAKADRQIEALLKRRDELVSFLNMAKELLGLQVTSLPTVPLPPLPKPIAPGLQPGVIRTVVPAVQVAVVP RPLKDRVVEACLELLKDGFPMKPVTLVEALELRGIEIGGANKAMSLSSMLSKDKRFQPDRKWGWSLKRAPSPVAAGEGGN TKQGETPDADSSDNEL >Mature_176_residues MDAIKAATEEIAKADRQIEALLKRRDELVSFLNMAKELLGLQVTSLPTVPLPPLPKPIAPGLQPGVIRTVVPAVQVAVVP RPLKDRVVEACLELLKDGFPMKPVTLVEALELRGIEIGGANKAMSLSSMLSKDKRFQPDRKWGWSLKRAPSPVAAGEGGN TKQGETPDADSSDNEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18964; Mature: 18964
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDAIKAATEEIAKADRQIEALLKRRDELVSFLNMAKELLGLQVTSLPTVPLPPLPKPIAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC GLQPGVIRTVVPAVQVAVVPRPLKDRVVEACLELLKDGFPMKPVTLVEALELRGIEIGGA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCC NKAMSLSSMLSKDKRFQPDRKWGWSLKRAPSPVAAGEGGNTKQGETPDADSSDNEL CHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDAIKAATEEIAKADRQIEALLKRRDELVSFLNMAKELLGLQVTSLPTVPLPPLPKPIAP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCCCC GLQPGVIRTVVPAVQVAVVPRPLKDRVVEACLELLKDGFPMKPVTLVEALELRGIEIGGA CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEECCC NKAMSLSSMLSKDKRFQPDRKWGWSLKRAPSPVAAGEGGNTKQGETPDADSSDNEL CHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA