| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241816
Identifier: 21241816
GI number: 21241816
Start: 1211424
End: 1212428
Strand: Reverse
Name: 21241816
Synonym: XAC1054
Alternate gene names: NA
Gene position: 1212428-1211424 (Counterclockwise)
Preceding gene: 21241817
Following gene: 21241815
Centisome position: 23.43
GC content: 57.01
Gene sequence:
>1005_bases ATGCCACTACGTCTCAAGGGCACGGCCCCCCGACCAGGGGAGGCCGACCGACGCTATTACATGATCGATGTGCAAGTTGG GAATCGTCGCGAGCGGCTCTCAACCGGAACACGAGATCGGCACCTCGCCGAGAAGAAAGAACAAAATATCATCGATGCAC TGCGCGATGACCCCGCGGTGACCTCGCTCGAACTCAAGCGCATTCTCCGCGGCGAACGTCTCGCAGCTATCCAGGAGCGC CGCCATGAAGCGAAGTCCTGGAGCCTCAAGGAGGCCTGCGATGCCTGCTTGCGCGACCGCGGAGAAGGTGGATGGGGCAC CACCCTCTCCAACGAGACTTACAAGGTCAACTGTGGACAGGCGCAGAAATATCTGACAGCTGACGTACCGGTTGCTTTCG TTGACCAAGAGAAAATCGAGGACTACGCCGATTTCCTCATAAACGACGAAGAGAACGCCAAGGCAACGGTCAACCGTAAG CTGTTCGCCCTCATGCACGTCCTGGCTTACGCAAAGGCTCATAAGCAGTATCCCGGAGACTTGCCCAGGTGGAAGCCATA TAAGGAGGGCGACAACGCGCGGCAGTTTGTGTTGACCGCACAGGACGAGCGAGCGATCTTCGATGCCATAGCTAAGTTGG ACGAGCGAGAAGACGGTCCAAAGGGGGGCAACCCCGTCGTACGAGATGCTGCAGACTACGTGGACTATTTCACCTTTCTC GCAGACATCGGTTGTCGTGCCGGCCAGGCGCTCAAAGTTCGCTGGAGGGACATCGACTGGGAGCTACAGCCTGGAGTGGT TGGTGTTAAGTTCTGGCGCAAAGGGGAACAGAAGGGAGGACGAATCCGAACGATTCCATGCACGGATCGTGTTTTGCAGA TCCTCAAACGCCGCAAAGCAAACAATACGGACGGGCCTTTCGCAGGGCTACGACGCATCCGAGCAACTCAGCTCTGGAAT CTAGGCAAAGCAAAAACAGCGCTTGATACGCCCAGGATTTCCTAG
Upstream 100 bases:
>100_bases CGAAGGGCCAGCAGTACCTAAACAGTCTCACCGAGCGCGTGAATAAGAGTCTCGAAAAACGAGGTATCCGCGCCGCTAAG TCCGCATAAATGGAGATGCG
Downstream 100 bases:
>100_bases ACATCTCAAGGCCATGGAAAATGGCTGATTCGGAGGTGTCCATGAGCAGTAAGCGGTATACGGATGAGTTCAAGATCGAG GCGGTCCGGCAAGTGACCGA
Product: integrase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MPLRLKGTAPRPGEADRRYYMIDVQVGNRRERLSTGTRDRHLAEKKEQNIIDALRDDPAVTSLELKRILRGERLAAIQER RHEAKSWSLKEACDACLRDRGEGGWGTTLSNETYKVNCGQAQKYLTADVPVAFVDQEKIEDYADFLINDEENAKATVNRK LFALMHVLAYAKAHKQYPGDLPRWKPYKEGDNARQFVLTAQDERAIFDAIAKLDEREDGPKGGNPVVRDAADYVDYFTFL ADIGCRAGQALKVRWRDIDWELQPGVVGVKFWRKGEQKGGRIRTIPCTDRVLQILKRRKANNTDGPFAGLRRIRATQLWN LGKAKTALDTPRIS
Sequences:
>Translated_334_residues MPLRLKGTAPRPGEADRRYYMIDVQVGNRRERLSTGTRDRHLAEKKEQNIIDALRDDPAVTSLELKRILRGERLAAIQER RHEAKSWSLKEACDACLRDRGEGGWGTTLSNETYKVNCGQAQKYLTADVPVAFVDQEKIEDYADFLINDEENAKATVNRK LFALMHVLAYAKAHKQYPGDLPRWKPYKEGDNARQFVLTAQDERAIFDAIAKLDEREDGPKGGNPVVRDAADYVDYFTFL ADIGCRAGQALKVRWRDIDWELQPGVVGVKFWRKGEQKGGRIRTIPCTDRVLQILKRRKANNTDGPFAGLRRIRATQLWN LGKAKTALDTPRIS >Mature_333_residues PLRLKGTAPRPGEADRRYYMIDVQVGNRRERLSTGTRDRHLAEKKEQNIIDALRDDPAVTSLELKRILRGERLAAIQERR HEAKSWSLKEACDACLRDRGEGGWGTTLSNETYKVNCGQAQKYLTADVPVAFVDQEKIEDYADFLINDEENAKATVNRKL FALMHVLAYAKAHKQYPGDLPRWKPYKEGDNARQFVLTAQDERAIFDAIAKLDEREDGPKGGNPVVRDAADYVDYFTFLA DIGCRAGQALKVRWRDIDWELQPGVVGVKFWRKGEQKGGRIRTIPCTDRVLQILKRRKANNTDGPFAGLRRIRATQLWNL GKAKTALDTPRIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38052; Mature: 37920
Theoretical pI: Translated: 9.86; Mature: 9.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLRLKGTAPRPGEADRRYYMIDVQVGNRRERLSTGTRDRHLAEKKEQNIIDALRDDPAV CCEECCCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH TSLELKRILRGERLAAIQERRHEAKSWSLKEACDACLRDRGEGGWGTTLSNETYKVNCGQ HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC AQKYLTADVPVAFVDQEKIEDYADFLINDEENAKATVNRKLFALMHVLAYAKAHKQYPGD CHHEEECCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LPRWKPYKEGDNARQFVLTAQDERAIFDAIAKLDEREDGPKGGNPVVRDAADYVDYFTFL CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ADIGCRAGQALKVRWRDIDWELQPGVVGVKFWRKGEQKGGRIRTIPCTDRVLQILKRRKA HHHCCCCCCEEEEEEECCCEEECCCEEEHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCC NNTDGPFAGLRRIRATQLWNLGKAKTALDTPRIS CCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC >Mature Secondary Structure PLRLKGTAPRPGEADRRYYMIDVQVGNRRERLSTGTRDRHLAEKKEQNIIDALRDDPAV CEECCCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCH TSLELKRILRGERLAAIQERRHEAKSWSLKEACDACLRDRGEGGWGTTLSNETYKVNCGQ HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCC AQKYLTADVPVAFVDQEKIEDYADFLINDEENAKATVNRKLFALMHVLAYAKAHKQYPGD CHHEEECCCCEEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCC LPRWKPYKEGDNARQFVLTAQDERAIFDAIAKLDEREDGPKGGNPVVRDAADYVDYFTFL CCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH ADIGCRAGQALKVRWRDIDWELQPGVVGVKFWRKGEQKGGRIRTIPCTDRVLQILKRRKA HHHCCCCCCEEEEEEECCCEEECCCEEEHHHHHCCCCCCCEEEEECCHHHHHHHHHHHCC NNTDGPFAGLRRIRATQLWNLGKAKTALDTPRIS CCCCCHHHHHHHHHHHHHHCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA