| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241798
Identifier: 21241798
GI number: 21241798
Start: 1191564
End: 1192388
Strand: Direct
Name: 21241798
Synonym: XAC1033
Alternate gene names: NA
Gene position: 1191564-1192388 (Clockwise)
Preceding gene: 21241797
Following gene: 21241799
Centisome position: 23.02
GC content: 66.55
Gene sequence:
>825_bases ATGAGCAGCGATCTGTTCGCAAGCGCGGATCTGTTCGACGCTGCGCGCCTGTGCCTGGACCAGGCCGACCCGCGACAGAA AGTCGCGCTGACCCAGCACTACGCAGCCGCCTTTCGCGAAGGCGTCCTGACGCTCGATCCGTCGGCGCCTGCGCCTGCGC CGATCCGCATGCCGGGGCGTCCGGCGACGCCACTGCTGGTGCATCCGCGCGACTTGCCGCGCCGTGGACTGGGCACGCCG GAAGGGCGCGCTGCGTTTATTCACGCCATTGCGCACATCGAGCTCAACGCCATCGATCTGGCCTGGGATGCGGTGTATCG CTTCCGCGGGCTTCCTGCGGCGTTCTATGCCGATTGGGTCGCGGTGGCCGACGATGAATCGCGCCACTTCATGCTGCTGC GCGCACGACTGCAGGCGCACGACCACGACTACGGCGATTTCGCCGCGCATAACGGGTTGTGGGAAATGTGCGAGAAGACT GCACACGACGGCCTGGCGCGCATGGCCCTGGTGCCGCGCGTGCTCGAAGCGCGCGGCCTGGACGTAACGCCGGGAATGAT CGTCAAACTTCGTTCGCTTGGCGACGCTGCCACTGCCGAGGTACTCGAAACCATCCTGCGCGAAGAAGTGGCGCACGTGG CCGCCGGCTCGCGTTGGTACCGCTGGTATTGCGAGCAGGCCGATGTCGAGCCGCGCGCACGGTTCAAGGCTCTGTTGCGC GAATACGCCGGCGGCTATCTGCATGGGCCGTTCAATCTGCAGGCGCGCCTGCTTGCCGGTTTCGACGAGGACGAGCTAGC CGACCTGGTGGAGCAGGCTGGCTGA
Upstream 100 bases:
>100_bases TCGATGACGCGCGCCTGCGCAACGGGCAGGTACCTGCGACCGAACGCGTGCAAGCGCAATCCGTTTCTGCAGCGCGCCAT TGCTCCGTACGGCCAACGGC
Downstream 100 bases:
>100_bases GCGTGGCCCGCATGCGAGCTGCGAACTTGCGTTCGTGGCCTGTGTCGTGGATCTACCTGACGCATGCGTGCGCAGATTTC AATGACGCCACCCACGCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 274; Mature: 273
Protein sequence:
>274_residues MSSDLFASADLFDAARLCLDQADPRQKVALTQHYAAAFREGVLTLDPSAPAPAPIRMPGRPATPLLVHPRDLPRRGLGTP EGRAAFIHAIAHIELNAIDLAWDAVYRFRGLPAAFYADWVAVADDESRHFMLLRARLQAHDHDYGDFAAHNGLWEMCEKT AHDGLARMALVPRVLEARGLDVTPGMIVKLRSLGDAATAEVLETILREEVAHVAAGSRWYRWYCEQADVEPRARFKALLR EYAGGYLHGPFNLQARLLAGFDEDELADLVEQAG
Sequences:
>Translated_274_residues MSSDLFASADLFDAARLCLDQADPRQKVALTQHYAAAFREGVLTLDPSAPAPAPIRMPGRPATPLLVHPRDLPRRGLGTP EGRAAFIHAIAHIELNAIDLAWDAVYRFRGLPAAFYADWVAVADDESRHFMLLRARLQAHDHDYGDFAAHNGLWEMCEKT AHDGLARMALVPRVLEARGLDVTPGMIVKLRSLGDAATAEVLETILREEVAHVAAGSRWYRWYCEQADVEPRARFKALLR EYAGGYLHGPFNLQARLLAGFDEDELADLVEQAG >Mature_273_residues SSDLFASADLFDAARLCLDQADPRQKVALTQHYAAAFREGVLTLDPSAPAPAPIRMPGRPATPLLVHPRDLPRRGLGTPE GRAAFIHAIAHIELNAIDLAWDAVYRFRGLPAAFYADWVAVADDESRHFMLLRARLQAHDHDYGDFAAHNGLWEMCEKTA HDGLARMALVPRVLEARGLDVTPGMIVKLRSLGDAATAEVLETILREEVAHVAAGSRWYRWYCEQADVEPRARFKALLRE YAGGYLHGPFNLQARLLAGFDEDELADLVEQAG
Specific function: Unknown
COG id: COG2833
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007402 - InterPro: IPR009078 - InterPro: IPR011197 [H]
Pfam domain/function: PF04305 DUF455 [H]
EC number: NA
Molecular weight: Translated: 30329; Mature: 30198
Theoretical pI: Translated: 5.75; Mature: 5.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSDLFASADLFDAARLCLDQADPRQKVALTQHYAAAFREGVLTLDPSAPAPAPIRMPGR CCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC PATPLLVHPRDLPRRGLGTPEGRAAFIHAIAHIELNAIDLAWDAVYRFRGLPAAFYADWV CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHCCCCHHHHHCCC AVADDESRHFMLLRARLQAHDHDYGDFAAHNGLWEMCEKTAHDGLARMALVPRVLEARGL EEECCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DVTPGMIVKLRSLGDAATAEVLETILREEVAHVAAGSRWYRWYCEQADVEPRARFKALLR CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHH EYAGGYLHGPFNLQARLLAGFDEDELADLVEQAG HHCCCEEECCCCCEEHEECCCCHHHHHHHHHHCC >Mature Secondary Structure SSDLFASADLFDAARLCLDQADPRQKVALTQHYAAAFREGVLTLDPSAPAPAPIRMPGR CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCC PATPLLVHPRDLPRRGLGTPEGRAAFIHAIAHIELNAIDLAWDAVYRFRGLPAAFYADWV CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHEEEEHHHHHHHHHHHHCCCCHHHHHCCC AVADDESRHFMLLRARLQAHDHDYGDFAAHNGLWEMCEKTAHDGLARMALVPRVLEARGL EEECCCCCHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC DVTPGMIVKLRSLGDAATAEVLETILREEVAHVAAGSRWYRWYCEQADVEPRARFKALLR CCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCHHEEEECCCCCCCHHHHHHHHHH EYAGGYLHGPFNLQARLLAGFDEDELADLVEQAG HHCCCEEECCCCCEEHEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]