| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241778
Identifier: 21241778
GI number: 21241778
Start: 1169784
End: 1170299
Strand: Direct
Name: 21241778
Synonym: XAC1013
Alternate gene names: NA
Gene position: 1169784-1170299 (Clockwise)
Preceding gene: 21241777
Following gene: 21241779
Centisome position: 22.6
GC content: 66.09
Gene sequence:
>516_bases ATGCTGCGTACCGCTACGGCAGGACTGCTCTGTCTCGCTCTGATCCCCGCTGCCTACGCCGCTCCAAACTGCGCCGGCAG CATGGTGTCCCAGCCACTGCCGTTGCCCGCTACTGTCGTTGCACCCGCGGCTGCCGAGTTCTATACCCGTAGCGTGCAGC TGGGCATGCCCACCGGCGTGCTGGCACAGCCCTATAGCAGCGACCAGTCGGTGGATCGTGTGCTGCTGCGCCTGCGCGTG GAAGGTTGCCAGGATCTGGCCAAGGTCATTCCGCCCGGCGGCACCGTCAACCCGAACGACCCGGCGGCCTACAAGGCCAC TACCGCGTTCGACAACACCCCGTGGCGCTTTGACATGAGCCAGAACGGCAAGCGCATGACGGCAGAAGAATTCGATGCCT GGATGAAGGCCCGCGGTGTGCGCGTGGTCAAGGCTCGCCCGGCCGCTGGTGCGGCACCTGCAGCGGCAGCGCCCGCAACA CCTGCGGCCGACGCCAAGTCGGTCGAAAACAAGTAA
Upstream 100 bases:
>100_bases CCTGTCTGTGTTGCCATCCAGGCACGGTTCCTGTTGAAACAGCGTTCATCGCTGCCTACACTCGCCGCGTCAACACCACA CTCATACTTGGAAGAACCCG
Downstream 100 bases:
>100_bases GCCCTGCGGTCGGGACGGCATGCCCCGGCGACCTGCGCCGGCAACGTCCCGGCAGCGTCAGCGTGGTCCGGGGGCGGGCG GCGCGGTGCGCCCACCCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MLRTATAGLLCLALIPAAYAAPNCAGSMVSQPLPLPATVVAPAAAEFYTRSVQLGMPTGVLAQPYSSDQSVDRVLLRLRV EGCQDLAKVIPPGGTVNPNDPAAYKATTAFDNTPWRFDMSQNGKRMTAEEFDAWMKARGVRVVKARPAAGAAPAAAAPAT PAADAKSVENK
Sequences:
>Translated_171_residues MLRTATAGLLCLALIPAAYAAPNCAGSMVSQPLPLPATVVAPAAAEFYTRSVQLGMPTGVLAQPYSSDQSVDRVLLRLRV EGCQDLAKVIPPGGTVNPNDPAAYKATTAFDNTPWRFDMSQNGKRMTAEEFDAWMKARGVRVVKARPAAGAAPAAAAPAT PAADAKSVENK >Mature_171_residues MLRTATAGLLCLALIPAAYAAPNCAGSMVSQPLPLPATVVAPAAAEFYTRSVQLGMPTGVLAQPYSSDQSVDRVLLRLRV EGCQDLAKVIPPGGTVNPNDPAAYKATTAFDNTPWRFDMSQNGKRMTAEEFDAWMKARGVRVVKARPAAGAAPAAAAPAT PAADAKSVENK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17811; Mature: 17811
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRTATAGLLCLALIPAAYAAPNCAGSMVSQPLPLPATVVAPAAAEFYTRSVQLGMPTGV CCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCC LAQPYSSDQSVDRVLLRLRVEGCQDLAKVIPPGGTVNPNDPAAYKATTAFDNTPWRFDMS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEECC QNGKRMTAEEFDAWMKARGVRVVKARPAAGAAPAAAAPATPAADAKSVENK CCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLRTATAGLLCLALIPAAYAAPNCAGSMVSQPLPLPATVVAPAAAEFYTRSVQLGMPTGV CCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHEECCCCCCC LAQPYSSDQSVDRVLLRLRVEGCQDLAKVIPPGGTVNPNDPAAYKATTAFDNTPWRFDMS CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCEEEECC QNGKRMTAEEFDAWMKARGVRVVKARPAAGAAPAAAAPATPAADAKSVENK CCCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA