| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241686
Identifier: 21241686
GI number: 21241686
Start: 1080015
End: 1080872
Strand: Reverse
Name: 21241686
Synonym: XAC0916
Alternate gene names: NA
Gene position: 1080872-1080015 (Counterclockwise)
Preceding gene: 77748555
Following gene: 21241683
Centisome position: 20.88
GC content: 67.13
Gene sequence:
>858_bases ATGAGCTCATCCATCGCCACGCTGCGCAGGCGCCTGTTACGCGGCTCCCTGGCCGGCGCCAGTCGGTTGGCTCCTGGACC CACCGGCCGCTATCTGGCACGTCGCTTCGTCACCCCGGCAGCGCTTGGGCGCCGGCAGGCGGCCACGATCGCGGCCACAT TGACCGACATGCAGCGTCACACGCTGCGGATCGATGACATCGACATCGCCATGTACCAGTGGGGCGATCCGGCGCAGCAG CGGTATGTGCTGCTGTCGCATGGCTGGGCCAGTTATGCGCTGCGCTTTGCGGCCTGGGTGCCGCAGTTGCGCGCACTCGG CTATGCGGTCGTGGCGTTCGACCAGGCGGCGCACGGCTTGAGCGGCGGACGAATCAGCTACATGCCGCATTTCGTGAAAA TGTTGCGTGTCATCGGCAGCCGCTTCGGCCGCCCGGCCGCATTTATCGGCCACTCGCTCGGCGCGGCCTCGGTGGTATTT GCCGACGACCCGGTGTGGCGCCCTGCGCGCTATGTGCTGATCGCACCGTTGCTGGCGCCGGCCGCCAGTGCGCAGCGCCA GTTTCGCGCATTCGGTATTGCGCCTGCCGCGTTCGCACCGTTCGAAAACTGGCTGGCAGACCTGACGGGCAAGCGCTTTT CCGATTTCGATGCGACGCCGCGCTTGCCGCAGTTCGATCGCCCGGCGCTGATCATCCCCGACCGTCGCGACCGCGAAACG CCGTGGGACGAAGGCGCGCGTTTCGCCAGCCTGTGGCCGGGCGCGCAGCTGTTCACCACCGAAGGGCTAGGCCATAACCG CATGGTCGACCACACCTCGGTGATCGAGCGGGCGATGCAATTTATCGGGCCGGCATGA
Upstream 100 bases:
>100_bases AGTGGATCAAACCATCTTGACGTTGACAAGATACGCGCACCAGACTGATGGCACATCTTGTCATCGACTAGATGCCGCCT CTCCTTGCAGGACATGCCTC
Downstream 100 bases:
>100_bases TCTGAAGAAATACGAGAAACTCTGCCATTGTGGCCGCAGCCCGAGGCAGCAGTCATCGCAGCGCGCATCGATGAGGTCTT GGGCAAACAAGCGACGCAGC
Product: hydrolase
Products: NA
Alternate protein names: Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase Fold Protein; Lysophospholipase
Number of amino acids: Translated: 285; Mature: 284
Protein sequence:
>285_residues MSSSIATLRRRLLRGSLAGASRLAPGPTGRYLARRFVTPAALGRRQAATIAATLTDMQRHTLRIDDIDIAMYQWGDPAQQ RYVLLSHGWASYALRFAAWVPQLRALGYAVVAFDQAAHGLSGGRISYMPHFVKMLRVIGSRFGRPAAFIGHSLGAASVVF ADDPVWRPARYVLIAPLLAPAASAQRQFRAFGIAPAAFAPFENWLADLTGKRFSDFDATPRLPQFDRPALIIPDRRDRET PWDEGARFASLWPGAQLFTTEGLGHNRMVDHTSVIERAMQFIGPA
Sequences:
>Translated_285_residues MSSSIATLRRRLLRGSLAGASRLAPGPTGRYLARRFVTPAALGRRQAATIAATLTDMQRHTLRIDDIDIAMYQWGDPAQQ RYVLLSHGWASYALRFAAWVPQLRALGYAVVAFDQAAHGLSGGRISYMPHFVKMLRVIGSRFGRPAAFIGHSLGAASVVF ADDPVWRPARYVLIAPLLAPAASAQRQFRAFGIAPAAFAPFENWLADLTGKRFSDFDATPRLPQFDRPALIIPDRRDRET PWDEGARFASLWPGAQLFTTEGLGHNRMVDHTSVIERAMQFIGPA >Mature_284_residues SSSIATLRRRLLRGSLAGASRLAPGPTGRYLARRFVTPAALGRRQAATIAATLTDMQRHTLRIDDIDIAMYQWGDPAQQR YVLLSHGWASYALRFAAWVPQLRALGYAVVAFDQAAHGLSGGRISYMPHFVKMLRVIGSRFGRPAAFIGHSLGAASVVFA DDPVWRPARYVLIAPLLAPAASAQRQFRAFGIAPAAFAPFENWLADLTGKRFSDFDATPRLPQFDRPALIIPDRRDRETP WDEGARFASLWPGAQLFTTEGLGHNRMVDHTSVIERAMQFIGPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31454; Mature: 31323
Theoretical pI: Translated: 11.59; Mature: 11.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSIATLRRRLLRGSLAGASRLAPGPTGRYLARRFVTPAALGRRQAATIAATLTDMQRH CCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHH TLRIDDIDIAMYQWGDPAQQRYVLLSHGWASYALRFAAWVPQLRALGYAVVAFDQAAHGL EEEECCCEEEEEECCCHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCC SGGRISYMPHFVKMLRVIGSRFGRPAAFIGHSLGAASVVFADDPVWRPARYVLIAPLLAP CCCEEHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHH AASAQRQFRAFGIAPAAFAPFENWLADLTGKRFSDFDATPRLPQFDRPALIIPDRRDRET HHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC PWDEGARFASLWPGAQLFTTEGLGHNRMVDHTSVIERAMQFIGPA CHHHCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure SSSIATLRRRLLRGSLAGASRLAPGPTGRYLARRFVTPAALGRRQAATIAATLTDMQRH CCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHH TLRIDDIDIAMYQWGDPAQQRYVLLSHGWASYALRFAAWVPQLRALGYAVVAFDQAAHGL EEEECCCEEEEEECCCHHHHCEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEEHHHHCCC SGGRISYMPHFVKMLRVIGSRFGRPAAFIGHSLGAASVVFADDPVWRPARYVLIAPLLAP CCCEEHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCCCCCCCHHHHHHHHHHHH AASAQRQFRAFGIAPAAFAPFENWLADLTGKRFSDFDATPRLPQFDRPALIIPDRRDRET HHHHHHHHHHHCCCCHHHCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCC PWDEGARFASLWPGAQLFTTEGLGHNRMVDHTSVIERAMQFIGPA CHHHCCEEECCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA