| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241669
Identifier: 21241669
GI number: 21241669
Start: 1061287
End: 1061802
Strand: Direct
Name: 21241669
Synonym: XAC0899
Alternate gene names: NA
Gene position: 1061287-1061802 (Clockwise)
Preceding gene: 21241665
Following gene: 21241670
Centisome position: 20.51
GC content: 64.34
Gene sequence:
>516_bases ATGCGTCGCACACTCTTCTCTCTGGTTCTGGCTCTGGCTGCCACCCCGGCGCTGGCTGGCGGCGTGATGCATTACACCGA CAAGGCCAAGCTGCCGGCCGGCGGCGAAGAGCGCGAAGTCGCTGCGCTGTTCGACACCTGGAACGCGGCGCTGGCCACCG GCAACCCGCACAAGGTGGCCGACCTGTACGCACCGGACGGCGTGTTGCTGCCGACGGTCTCCAACGAAGTGCGCGCCTCG CGCGAACAGATCGAAAACTACTTCGAGATGTTCCTGACCAAGAAGCCGCAGGGCGTGGTCAATTACCGCACCGTGCGCGT GCTCGATGACGACAGCGCCGTGGATGCCGGCGTGTACACCTTCACGCTGACCGACAAGGCCGGCAACAAGAGCAACGTGC AGGCCCGCTACACCTTCGTGTACGAAAAGCGCGACGGCAAGTGGCTGATCATCAACCACCACAGCTCGGCGATGCCGGAA GTGGACACGCGCGCGGCGGTTGCCAAGGCCAAGTAA
Upstream 100 bases:
>100_bases TATTTGAGTATATGCCACTCGGCAGAATTGTTGGGGCTGCTTGATTTCGATACTGAGCCTGCCCGATGCGGCACCCCCAT CAATCACACGGAGATTCCCC
Downstream 100 bases:
>100_bases TGCGGCGCGGACGACAGGCGCTGGCCGGGCAGGCTTGAAAGTGGCTCTGGCCGGCGCCATCCAGCAGGCAATCCTGACGA TTGCGGAGCTGCACCATGCT
Product: hypothetical protein
Products: NA
Alternate protein names: Kinase; Protein With A Cystatin-Like Fold; Secreted Protein; Exported Protein
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MRRTLFSLVLALAATPALAGGVMHYTDKAKLPAGGEEREVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRAS REQIENYFEMFLTKKPQGVVNYRTVRVLDDDSAVDAGVYTFTLTDKAGNKSNVQARYTFVYEKRDGKWLIINHHSSAMPE VDTRAAVAKAK
Sequences:
>Translated_171_residues MRRTLFSLVLALAATPALAGGVMHYTDKAKLPAGGEEREVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRAS REQIENYFEMFLTKKPQGVVNYRTVRVLDDDSAVDAGVYTFTLTDKAGNKSNVQARYTFVYEKRDGKWLIINHHSSAMPE VDTRAAVAKAK >Mature_171_residues MRRTLFSLVLALAATPALAGGVMHYTDKAKLPAGGEEREVAALFDTWNAALATGNPHKVADLYAPDGVLLPTVSNEVRAS REQIENYFEMFLTKKPQGVVNYRTVRVLDDDSAVDAGVYTFTLTDKAGNKSNVQARYTFVYEKRDGKWLIINHHSSAMPE VDTRAAVAKAK
Specific function: Unknown
COG id: COG4875
COG function: function code S; Uncharacterized protein conserved in bacteria with a cystatin-like fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18788; Mature: 18788
Theoretical pI: Translated: 8.78; Mature: 8.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTLFSLVLALAATPALAGGVMHYTDKAKLPAGGEEREVAALFDTWNAALATGNPHKVA CCHHHHHHHHHHHHCHHHHCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEE DLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPQGVVNYRTVRVLDDDSAVDAGVYT EEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEE FTLTDKAGNKSNVQARYTFVYEKRDGKWLIINHHSSAMPEVDTRAAVAKAK EEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MRRTLFSLVLALAATPALAGGVMHYTDKAKLPAGGEEREVAALFDTWNAALATGNPHKVA CCHHHHHHHHHHHHCHHHHCCEEEECCCCCCCCCCCCCEEEEEEECCCCEEECCCCCEEE DLYAPDGVLLPTVSNEVRASREQIENYFEMFLTKKPQGVVNYRTVRVLDDDSAVDAGVYT EEECCCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCCEEE FTLTDKAGNKSNVQARYTFVYEKRDGKWLIINHHSSAMPEVDTRAAVAKAK EEEECCCCCCCCCEEEEEEEEEECCCCEEEEECCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA