| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is torS [H]
Identifier: 21241667
GI number: 21241667
Start: 1058548
End: 1060458
Strand: Reverse
Name: torS [H]
Synonym: XAC0897
Alternate gene names: 21241667
Gene position: 1060458-1058548 (Counterclockwise)
Preceding gene: 21241668
Following gene: 21241666
Centisome position: 20.49
GC content: 65.31
Gene sequence:
>1911_bases ATGAATGCATTGGCGGTGCGTTGGAACGATTGGCCGATTACCCGCAAAAGCCTGGCGGTCGTCACCCTGCCATTGCTGTT GCTGGCCGTTGCATTGATGGCGATCTACAGCGTGGAACGGCAGAACATCGCCGCCGAAAACGACGTGCGGCAGACCCTGG AAGTGCTCAGCGATCTGTACGAAGCGCACGCACTGTTAGCCGAAACCGCGGCCGGCGTGCGCGGCTATCGGTTGGTGCGG CGCGATGAATTTCTGACCCCGTATCGCGATGCCGAGCCGCGGCTGCAGCGCGTGGCCGACCGTCTTTCGCAACGTATTAC CGACCCCAGCCAAGCGCAGCGCTTTGCGCGCATCAAGCCACTTTTTGCGGAAAAAATGCAGGGTTGGCGCCGATTGCTGG CACCGGATCTGAGCCGCGAAGAAGAGATTCGGCAACTGTGGGATGGCAAGTACAAACTCGACATCCTGCGTGCGGAGCTG CGCGAATTGCGCAATTACGAAACCGCGCAGTTGCAGGTGCGTACCGCCAAGGCGCAGGGGCTGCGCCAGCGCAACCTCAT CATCACCTTGAGCGCGGCGATGCTGGGCGGGCTGGGCGCGGTATTTGCCGTGGCATGGTTCGCCTCGGCATTGTCCGGGC GCCTGCGCACCCTGGCCGCCAACGCCGACCGGCTGGGCGAAGGCCTGCCGCTGGCACCGCAACCGCGTGCCGGCGACGAA CTGGGCCAGGTCGGGCAGCGCCTGGCGCAAGCCAGCGAACTGTTGGCCGCACGCGCAGCCGAAGCGCAGCTGGCGCGGCG CGAGGCCGAAACCGCCAACCGCGCAAAAACCGAATTTCTCTCGCGCAGCAGCCATGAACTGCGGACTCCGCTCAATGCGA TCCTGGGCTATGCGCAGGTGCTGGAAATGGATCTGCCCGAGCCGGGTCATCGACGGCATCTGCGGCACATTCTGGGTGCC GGCAGGCACTTGCTCGGGTTGATCACCGAGCTGCTGGACATCGCGCGTATCGAAGCCGATCAACTTGATCTGAGCCCGGA GCCGATCTCGGTACGCGCGGCCGTGCACGAAGCCTTGGGACTGATCGCACCGGATGCCGACAAGCATGGCATTGCGCTGC AACCGGCATCCATCGACGGACCGTGGACGGTGCGCGCCGATGCGCAGCGGCTGCGCCAGGTGCTGCTCAATCTGCTGTCG AACGCGGTCAAGTTCAATCGTACTGGCGGGCAGGTCCAGGTGAGCGCGCAGGCCGATGGCGAGCAGGTGCGTATCACCGT GGCCGACCAGGGCGCGGGGCTGACCCCGGCCCAGATCGAACGCCTGTTTACCCCGTTCGAGCGGTTGGGCGCCGAGCGCT CTGCGGTGGAAGGCACCGGGTTGGGGTTGGCGCTGAGCAAGCGTTTGATCGAGGCGATGGGTGGACAGATCGGCGTGGAC AGCAGCAGCGATGGCGCGCGGTTCTGGATTTCGCTGCCGCAGGGAGAGCATCAGCACAGCGAACCAACGCGGCCGCTGGT GCCGCCGAGCAATGCCGGCAGCGGCGTGTGCCGGCTGCTGAGCATCGAAGACAACCCATCCAATCAGGCGCTGATCCGCA CGCTCACCGAACGTCGCCCGCAATGGCAGCTGCTCGAAGCTGCCAGCCTGGCGCAAGCGCGTGAGCTGTTGCAGCACGGC GCGCCGGATCTGATTCTGCTGGACCTGCACCTGAGCGACGGCAACGGCGAAGAGCTGTTGCGCGAACTGCAGGCGCAGCC GGCGATGGCAGCCATCCCGGTGGTGGTAATCAGTGCCGATGCCACGAGCGCCACGCTGGCGCGCGTGGGCAACCAAGGCG TGCGCGCCTATCTGACCAAGCCACTCGATGTGGCGGAATTCTTCACCGTGATCGACGGGTTGCTGGCATGA
Upstream 100 bases:
>100_bases CCGGCACGGTCAAAGTGCACGTGGAGCGAATCCTGCAGAAACTTGAGGTAAAAGATCGCACCCAGGCCGCGGTGTACGCG GTCCAATCCGGACTTGCGCT
Downstream 100 bases:
>100_bases CACACGATGAAATCCTCGGCTCCCGCATCCTCATCGTCGACGACGAGCCGGCCAACGTGCGGCTGCTCGAAGACCTGCTG CAACGCGAAGGCTTCCAGCA
Product: two-component system sensor protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 636; Mature: 636
Protein sequence:
>636_residues MNALAVRWNDWPITRKSLAVVTLPLLLLAVALMAIYSVERQNIAAENDVRQTLEVLSDLYEAHALLAETAAGVRGYRLVR RDEFLTPYRDAEPRLQRVADRLSQRITDPSQAQRFARIKPLFAEKMQGWRRLLAPDLSREEEIRQLWDGKYKLDILRAEL RELRNYETAQLQVRTAKAQGLRQRNLIITLSAAMLGGLGAVFAVAWFASALSGRLRTLAANADRLGEGLPLAPQPRAGDE LGQVGQRLAQASELLAARAAEAQLARREAETANRAKTEFLSRSSHELRTPLNAILGYAQVLEMDLPEPGHRRHLRHILGA GRHLLGLITELLDIARIEADQLDLSPEPISVRAAVHEALGLIAPDADKHGIALQPASIDGPWTVRADAQRLRQVLLNLLS NAVKFNRTGGQVQVSAQADGEQVRITVADQGAGLTPAQIERLFTPFERLGAERSAVEGTGLGLALSKRLIEAMGGQIGVD SSSDGARFWISLPQGEHQHSEPTRPLVPPSNAGSGVCRLLSIEDNPSNQALIRTLTERRPQWQLLEAASLAQARELLQHG APDLILLDLHLSDGNGEELLRELQAQPAMAAIPVVVISADATSATLARVGNQGVRAYLTKPLDVAEFFTVIDGLLA
Sequences:
>Translated_636_residues MNALAVRWNDWPITRKSLAVVTLPLLLLAVALMAIYSVERQNIAAENDVRQTLEVLSDLYEAHALLAETAAGVRGYRLVR RDEFLTPYRDAEPRLQRVADRLSQRITDPSQAQRFARIKPLFAEKMQGWRRLLAPDLSREEEIRQLWDGKYKLDILRAEL RELRNYETAQLQVRTAKAQGLRQRNLIITLSAAMLGGLGAVFAVAWFASALSGRLRTLAANADRLGEGLPLAPQPRAGDE LGQVGQRLAQASELLAARAAEAQLARREAETANRAKTEFLSRSSHELRTPLNAILGYAQVLEMDLPEPGHRRHLRHILGA GRHLLGLITELLDIARIEADQLDLSPEPISVRAAVHEALGLIAPDADKHGIALQPASIDGPWTVRADAQRLRQVLLNLLS NAVKFNRTGGQVQVSAQADGEQVRITVADQGAGLTPAQIERLFTPFERLGAERSAVEGTGLGLALSKRLIEAMGGQIGVD SSSDGARFWISLPQGEHQHSEPTRPLVPPSNAGSGVCRLLSIEDNPSNQALIRTLTERRPQWQLLEAASLAQARELLQHG APDLILLDLHLSDGNGEELLRELQAQPAMAAIPVVVISADATSATLARVGNQGVRAYLTKPLDVAEFFTVIDGLLA >Mature_636_residues MNALAVRWNDWPITRKSLAVVTLPLLLLAVALMAIYSVERQNIAAENDVRQTLEVLSDLYEAHALLAETAAGVRGYRLVR RDEFLTPYRDAEPRLQRVADRLSQRITDPSQAQRFARIKPLFAEKMQGWRRLLAPDLSREEEIRQLWDGKYKLDILRAEL RELRNYETAQLQVRTAKAQGLRQRNLIITLSAAMLGGLGAVFAVAWFASALSGRLRTLAANADRLGEGLPLAPQPRAGDE LGQVGQRLAQASELLAARAAEAQLARREAETANRAKTEFLSRSSHELRTPLNAILGYAQVLEMDLPEPGHRRHLRHILGA GRHLLGLITELLDIARIEADQLDLSPEPISVRAAVHEALGLIAPDADKHGIALQPASIDGPWTVRADAQRLRQVLLNLLS NAVKFNRTGGQVQVSAQADGEQVRITVADQGAGLTPAQIERLFTPFERLGAERSAVEGTGLGLALSKRLIEAMGGQIGVD SSSDGARFWISLPQGEHQHSEPTRPLVPPSNAGSGVCRLLSIEDNPSNQALIRTLTERRPQWQLLEAASLAQARELLQHG APDLILLDLHLSDGNGEELLRELQAQPAMAAIPVVVISADATSATLARVGNQGVRAYLTKPLDVAEFFTVIDGLLA
Specific function: At low cell density, in absence of autoinducer has a kinase activity, and autophosphorylates on a histidine residue. The phosphoryl group is then transferred to an aspartate residue in the response regulator domain. The phosphoryl group is transferred to
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 response regulatory domain [H]
Homologues:
Organism=Escherichia coli, GI87081816, Length=390, Percent_Identity=34.6153846153846, Blast_Score=166, Evalue=4e-42, Organism=Escherichia coli, GI1789149, Length=350, Percent_Identity=29.1428571428571, Blast_Score=138, Evalue=9e-34, Organism=Escherichia coli, GI48994928, Length=368, Percent_Identity=30.7065217391304, Blast_Score=136, Evalue=5e-33, Organism=Escherichia coli, GI145693157, Length=228, Percent_Identity=36.4035087719298, Blast_Score=134, Evalue=1e-32, Organism=Escherichia coli, GI1788713, Length=445, Percent_Identity=26.9662921348315, Blast_Score=132, Evalue=9e-32, Organism=Escherichia coli, GI1786912, Length=263, Percent_Identity=33.8403041825095, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1790436, Length=212, Percent_Identity=32.0754716981132, Blast_Score=99, Evalue=7e-22, Organism=Escherichia coli, GI1788393, Length=272, Percent_Identity=30.8823529411765, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1788549, Length=240, Percent_Identity=32.9166666666667, Blast_Score=96, Evalue=8e-21, Organism=Escherichia coli, GI1790346, Length=265, Percent_Identity=31.6981132075472, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786783, Length=223, Percent_Identity=26.9058295964126, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1786600, Length=227, Percent_Identity=29.5154185022026, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI87082128, Length=315, Percent_Identity=26.984126984127, Blast_Score=80, Evalue=5e-16, Organism=Escherichia coli, GI1787894, Length=224, Percent_Identity=31.6964285714286, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790861, Length=302, Percent_Identity=27.8145695364238, Blast_Score=69, Evalue=9e-13, Organism=Escherichia coli, GI1788279, Length=229, Percent_Identity=27.0742358078603, Blast_Score=66, Evalue=6e-12, Organism=Escherichia coli, GI1789808, Length=232, Percent_Identity=25, Blast_Score=64, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR011006 - InterPro: IPR015387 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 - InterPro: IPR001789 - ProDom: PD142495 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA; PF09308 LuxQ-periplasm; PF00072 Response_reg [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 69549; Mature: 69549
Theoretical pI: Translated: 6.98; Mature: 6.98
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALAVRWNDWPITRKSLAVVTLPLLLLAVALMAIYSVERQNIAAENDVRQTLEVLSDLY CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EAHALLAETAAGVRGYRLVRRDEFLTPYRDAEPRLQRVADRLSQRITDPSQAQRFARIKP HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH LFAEKMQGWRRLLAPDLSREEEIRQLWDGKYKLDILRAELRELRNYETAQLQVRTAKAQG HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEEEEHHHHC LRQRNLIITLSAAMLGGLGAVFAVAWFASALSGRLRTLAANADRLGEGLPLAPQPRAGDE CHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHH LGQVGQRLAQASELLAARAAEAQLARREAETANRAKTEFLSRSSHELRTPLNAILGYAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LEMDLPEPGHRRHLRHILGAGRHLLGLITELLDIARIEADQLDLSPEPISVRAAVHEALG HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHH LIAPDADKHGIALQPASIDGPWTVRADAQRLRQVLLNLLSNAVKFNRTGGQVQVSAQADG CCCCCCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC EQVRITVADQGAGLTPAQIERLFTPFERLGAERSAVEGTGLGLALSKRLIEAMGGQIGVD CEEEEEEECCCCCCCHHHHHHHHCHHHHHCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCC SSSDGARFWISLPQGEHQHSEPTRPLVPPSNAGSGVCRLLSIEDNPSNQALIRTLTERRP CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCC QWQLLEAASLAQARELLQHGAPDLILLDLHLSDGNGEELLRELQAQPAMAAIPVVVISAD CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCHHCCCEEEEECC ATSATLARVGNQGVRAYLTKPLDVAEFFTVIDGLLA CCHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNALAVRWNDWPITRKSLAVVTLPLLLLAVALMAIYSVERQNIAAENDVRQTLEVLSDLY CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH EAHALLAETAAGVRGYRLVRRDEFLTPYRDAEPRLQRVADRLSQRITDPSQAQRFARIKP HHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH LFAEKMQGWRRLLAPDLSREEEIRQLWDGKYKLDILRAELRELRNYETAQLQVRTAKAQG HHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHEEEEEHHHHC LRQRNLIITLSAAMLGGLGAVFAVAWFASALSGRLRTLAANADRLGEGLPLAPQPRAGDE CHHCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCCCHH LGQVGQRLAQASELLAARAAEAQLARREAETANRAKTEFLSRSSHELRTPLNAILGYAQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH LEMDLPEPGHRRHLRHILGAGRHLLGLITELLDIARIEADQLDLSPEPISVRAAVHEALG HHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCHHHCCCCCCCCHHHHHHHHHHH LIAPDADKHGIALQPASIDGPWTVRADAQRLRQVLLNLLSNAVKFNRTGGQVQVSAQADG CCCCCCCCCCEEEECCCCCCCEEECHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCC EQVRITVADQGAGLTPAQIERLFTPFERLGAERSAVEGTGLGLALSKRLIEAMGGQIGVD CEEEEEEECCCCCCCHHHHHHHHCHHHHHCCCHHCCCCCCCHHHHHHHHHHHCCCCCCCC SSSDGARFWISLPQGEHQHSEPTRPLVPPSNAGSGVCRLLSIEDNPSNQALIRTLTERRP CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCC QWQLLEAASLAQARELLQHGAPDLILLDLHLSDGNGEELLRELQAQPAMAAIPVVVISAD CHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHCCCCHHCCCEEEEECC ATSATLARVGNQGVRAYLTKPLDVAEFFTVIDGLLA CCHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA