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The map label for this gene is oppC [H]

Identifier: 21241628

GI number: 21241628

Start: 1020198

End: 1021082

Strand: Direct

Name: oppC [H]

Synonym: XAC0858

Alternate gene names: 21241628

Gene position: 1020198-1021082 (Clockwise)

Preceding gene: 21241627

Following gene: 21241629

Centisome position: 19.71

GC content: 70.96

Gene sequence:

>885_bases
ATGAATACCGCAACGCTGTCTCGTGCGCTCCCTCCCTGCGCGCTGTGCGCGCGTGTCCGTGGCGCACTGCGCTGGCTGAT
CGCGCTGCCTCCCGGGCCCGCGTTGGCGGCTGCCTTTCTCAGCTTGCTGCTCGCGCTGGTGCTGGCGCCAGCCCTGTTCG
CCGGCGCCGACCCGCTGGCGGTGGCGCCGCGGCAGGCGTTCCAGGCGCCGAGCTGGGCGCACTGGTTCGGCACCGATGCT
TCCGGCCGCGATCTGTGGGCACGCGTGGTCTACGGCGCGCGTGAATCGCTGGCGATCGGCGTGGCCGCCACCGCCCTGGC
GATGAGTGTGGCCATCGTCTTGGGGCTGGCCGCCGGGCTCGGCGGGCGGTTGCTCGATCGCTGCATCGGCGCTGCCTTGA
ACGTGCTGTTCGCGTTTCCGTCGCTGGTATTGGCCTTGCTGCTGGTCGCGGTGTTCGGGGCCGGGCTGGGGCCGGTGATC
GTGGCCACCGGTCTGGGCTGTGCGCCCGGCTATGCACGCATGGTGCGTGCGCAGGTGCTGACGGTGCGCGGTTCCGGCTA
CGTGGAAGCGGCGCGCGTGCTTGGCCATGGGCCGTGGCGGATCGTGCTGCGGCACATCCTGCCCAATGCGATGCGGCCGC
TGCTGGTCACGGTCACCCTGGGCGTGGGCCAGATCATCGTGTGGGCGTCGGCACTGAGTTTTCTCGGGCTGGGCAAGCCG
CCACCGGCGGCGGAGTGGGGCACCCTGCTGTCGGTGGGGCGCGACTTCGTCGCCCTGGCCTGGTGGATGAGCTTCTTCCC
CGGCGTGTTCATCGTGCTCACCACGCTGTCCACCAGCGTGCTCGGACGCTGGTTGCAGCGGCGTCTGGAAGGACGCAGCC
CATGA

Upstream 100 bases:

>100_bases
TGGGCATCGTGTTGTTCATCGCGGCGGTCTATGTGATCGCCAACCTGTCGATCGACGCCCTGCAGCGATTGGTCGATCCG
CGTCTGTCCGGAGAGTCCCG

Downstream 100 bases:

>100_bases
GCACGCCGCTGCTGCGCGTGGATGGCCTCACCGTCACGTTCGCACGCCCCGGCCAGCCTGCGCTCACGGTGGTGCGCGAA
CTGTCCTTCAGCCTGGCGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MNTATLSRALPPCALCARVRGALRWLIALPPGPALAAAFLSLLLALVLAPALFAGADPLAVAPRQAFQAPSWAHWFGTDA
SGRDLWARVVYGARESLAIGVAATALAMSVAIVLGLAAGLGGRLLDRCIGAALNVLFAFPSLVLALLLVAVFGAGLGPVI
VATGLGCAPGYARMVRAQVLTVRGSGYVEAARVLGHGPWRIVLRHILPNAMRPLLVTVTLGVGQIIVWASALSFLGLGKP
PPAAEWGTLLSVGRDFVALAWWMSFFPGVFIVLTTLSTSVLGRWLQRRLEGRSP

Sequences:

>Translated_294_residues
MNTATLSRALPPCALCARVRGALRWLIALPPGPALAAAFLSLLLALVLAPALFAGADPLAVAPRQAFQAPSWAHWFGTDA
SGRDLWARVVYGARESLAIGVAATALAMSVAIVLGLAAGLGGRLLDRCIGAALNVLFAFPSLVLALLLVAVFGAGLGPVI
VATGLGCAPGYARMVRAQVLTVRGSGYVEAARVLGHGPWRIVLRHILPNAMRPLLVTVTLGVGQIIVWASALSFLGLGKP
PPAAEWGTLLSVGRDFVALAWWMSFFPGVFIVLTTLSTSVLGRWLQRRLEGRSP
>Mature_294_residues
MNTATLSRALPPCALCARVRGALRWLIALPPGPALAAAFLSLLLALVLAPALFAGADPLAVAPRQAFQAPSWAHWFGTDA
SGRDLWARVVYGARESLAIGVAATALAMSVAIVLGLAAGLGGRLLDRCIGAALNVLFAFPSLVLALLLVAVFGAGLGPVI
VATGLGCAPGYARMVRAQVLTVRGSGYVEAARVLGHGPWRIVLRHILPNAMRPLLVTVTLGVGQIIVWASALSFLGLGKP
PPAAEWGTLLSVGRDFVALAWWMSFFPGVFIVLTTLSTSVLGRWLQRRLEGRSP

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787760, Length=277, Percent_Identity=35.0180505415162, Blast_Score=166, Evalue=1e-42,
Organism=Escherichia coli, GI1787054, Length=225, Percent_Identity=40, Blast_Score=163, Evalue=1e-41,
Organism=Escherichia coli, GI1789964, Length=222, Percent_Identity=41.8918918918919, Blast_Score=136, Evalue=2e-33,
Organism=Escherichia coli, GI1789889, Length=234, Percent_Identity=32.4786324786325, Blast_Score=127, Evalue=1e-30,
Organism=Escherichia coli, GI1787498, Length=305, Percent_Identity=34.4262295081967, Blast_Score=120, Evalue=1e-28,
Organism=Escherichia coli, GI1787549, Length=224, Percent_Identity=30.8035714285714, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1788505, Length=214, Percent_Identity=32.2429906542056, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30704; Mature: 30704

Theoretical pI: Translated: 11.98; Mature: 11.98

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTATLSRALPPCALCARVRGALRWLIALPPGPALAAAFLSLLLALVLAPALFAGADPLA
CCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VAPRQAFQAPSWAHWFGTDASGRDLWARVVYGARESLAIGVAATALAMSVAIVLGLAAGL
CCCHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGRLLDRCIGAALNVLFAFPSLVLALLLVAVFGAGLGPVIVATGLGCAPGYARMVRAQVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHH
TVRGSGYVEAARVLGHGPWRIVLRHILPNAMRPLLVTVTLGVGQIIVWASALSFLGLGKP
EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPAAEWGTLLSVGRDFVALAWWMSFFPGVFIVLTTLSTSVLGRWLQRRLEGRSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNTATLSRALPPCALCARVRGALRWLIALPPGPALAAAFLSLLLALVLAPALFAGADPLA
CCCHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCC
VAPRQAFQAPSWAHWFGTDASGRDLWARVVYGARESLAIGVAATALAMSVAIVLGLAAGL
CCCHHHHCCCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
GGRLLDRCIGAALNVLFAFPSLVLALLLVAVFGAGLGPVIVATGLGCAPGYARMVRAQVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHH
TVRGSGYVEAARVLGHGPWRIVLRHILPNAMRPLLVTVTLGVGQIIVWASALSFLGLGKP
EECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PPAAEWGTLLSVGRDFVALAWWMSFFPGVFIVLTTLSTSVLGRWLQRRLEGRSP
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]