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The map label for this gene is ssuC [H]

Identifier: 21241618

GI number: 21241618

Start: 1007500

End: 1008351

Strand: Reverse

Name: ssuC [H]

Synonym: XAC0848

Alternate gene names: 21241618

Gene position: 1008351-1007500 (Counterclockwise)

Preceding gene: 21241619

Following gene: 21241617

Centisome position: 19.48

GC content: 68.9

Gene sequence:

>852_bases
ATGAACGACACCTCCTTGCGCGTTTCCGCCTCCGTGGCCGGCACCCCGCCGCGACCGCGCCTCAGGCTGCCCGCCAGCAG
CCTGGGCTGGCTACTGCCGCTGGTCTTCTTCGCCGGGCTCGAACTTGCCTCGGCGCTGGGCTGGACACCGAGTTACCTGC
TACCGCCGCCCAGCCAGATCCTGCGCACGCTTGCCGACGAGGCGAGCCGCGGACTGGCCAGTCATGTTGGCGCCAGTGTG
TTGCGGGTGCTGGCGGGCTTCTCCATCGGCGCCGGGCTCGGCCTGCTGGTCGGTGTGGCGGTGGGCCTGAGCCGCTGGCT
GGAACGCCTGCTCGATCCCAGCTTCCAGGCGCTGCGCGCAGTGCCCAGCCTGGCCTGGGTGCCGTTGCTGCTGCTGTGGA
TGGGCATCGACGAGGCGCCCAAGATCACCCTGATCGCCATCGGCGCGTTCTTCCCCGTGTATCTGGGCGTGGTCAGCGGC
CTGCGCCAGGTCGACCGCACGCTGGTGGAGCTGGGCGAAAGCTACGGGCTGTCCAAACCACGCCTGGTGCGGCGCATCCT
GCTGCCGGCGGCGCTGCCGTCCATCTTCACCGGGCTGCGCACCAGCCTGAGTCTGGCCTGGATGTTCCTGGTCGCCGCCG
AGCTGATCGCTGCCACCCGCGGGCTGGGTTATCTGCTGAGCGACGGGCGCGAAACCTCGCGACCGGACATCGTGATCGGC
GCCATCGTATTGCTCGCACTGCTCGGAAAACTCAGCGATGGCCTACTCAAGAGCATCGAATCGCGCACCTTGCGCTGGCG
CGACAACCTGCAGAATCGTAGCGCGCCCGGCCACCCTGGGAGCCCTAGGTGA

Upstream 100 bases:

>100_bases
GCCTGGTCCGTCCCGGCACCGATCTGGGCAAGGTGCTGGCTGGGCTGATCGATCCCAGCTACGCCAAGCGCGCAGGCGTG
GCGCGGGCCTGAGCACGGCG

Downstream 100 bases:

>100_bases
GCAGCTCCGGCCTGCAGCTGCACATCGCCGGCAAACGTTTCGGCACGCGCCAGGTGCTGCGCGATATCGACCTGCAGCTG
GCACCCGGCGAGATCGTCAG

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 283; Mature: 283

Protein sequence:

>283_residues
MNDTSLRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQILRTLADEASRGLASHVGASV
LRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGIDEAPKITLIAIGAFFPVYLGVVSG
LRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIAATRGLGYLLSDGRETSRPDIVIG
AIVLLALLGKLSDGLLKSIESRTLRWRDNLQNRSAPGHPGSPR

Sequences:

>Translated_283_residues
MNDTSLRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQILRTLADEASRGLASHVGASV
LRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGIDEAPKITLIAIGAFFPVYLGVVSG
LRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIAATRGLGYLLSDGRETSRPDIVIG
AIVLLALLGKLSDGLLKSIESRTLRWRDNLQNRSAPGHPGSPR
>Mature_283_residues
MNDTSLRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQILRTLADEASRGLASHVGASV
LRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRAVPSLAWVPLLLLWMGIDEAPKITLIAIGAFFPVYLGVVSG
LRQVDRTLVELGESYGLSKPRLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIAATRGLGYLLSDGRETSRPDIVIG
AIVLLALLGKLSDGLLKSIESRTLRWRDNLQNRSAPGHPGSPR

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=247, Percent_Identity=46.1538461538462, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1786564, Length=225, Percent_Identity=36.4444444444444, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30229; Mature: 30229

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDTSLRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQI
CCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LRTLADEASRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VPSLAWVPLLLLWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKP
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIAATRGLGYLLSDGRETSRPDIVIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
AIVLLALLGKLSDGLLKSIESRTLRWRDNLQNRSAPGHPGSPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MNDTSLRVSASVAGTPPRPRLRLPASSLGWLLPLVFFAGLELASALGWTPSYLLPPPSQI
CCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH
LRTLADEASRGLASHVGASVLRVLAGFSIGAGLGLLVGVAVGLSRWLERLLDPSFQALRA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
VPSLAWVPLLLLWMGIDEAPKITLIAIGAFFPVYLGVVSGLRQVDRTLVELGESYGLSKP
HHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
RLVRRILLPAALPSIFTGLRTSLSLAWMFLVAAELIAATRGLGYLLSDGRETSRPDIVIG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCHHHHH
AIVLLALLGKLSDGLLKSIESRTLRWRDNLQNRSAPGHPGSPR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]