| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is msuC [H]
Identifier: 21241616
GI number: 21241616
Start: 1005433
End: 1006620
Strand: Reverse
Name: msuC [H]
Synonym: XAC0846
Alternate gene names: 21241616
Gene position: 1006620-1005433 (Counterclockwise)
Preceding gene: 21241617
Following gene: 21241615
Centisome position: 19.45
GC content: 67.09
Gene sequence:
>1188_bases ATGACCAGCCGCCAACCGCAACCGACCCTGCTCAATCCGCTGCAGACCGCCCAGCGCCTGGCTGCCGGGTTCGCCGACAC CGCGATCGAGCGCGATGCGCGCGGCGGCACTCCCAAGGCCGAGCGCGATGCATTGCGCGCCAGCGGCCTGCTCGCGCTCA GCATTCCGGTGCAGTACGGCGGCCTCGGCGCAAGCTGGAGCGAGGTGCTGCAGGTCGTGCGCACCTTCGCCAAGGTCGAC AGCTCCATCGCGCATGTGTTCGGCTTCCATCATCTGATGCTCGCCACTGTGCGGCTGTTTGGCCAGCCCGCGCAGTGGCA GCCGTGGCTGGAGCAGACCGCGCGCAAGCAGTGGTTCTGGGGCAATGCGCTCAACCCCCTGGATACCCGCACCGTCGCCG TGCAATGCGAAGGCTGGCGCGAATTTTCCGGCAGAAAGAGTTTCTGTTCCGGCGCCATCGATTCGCAAATGCTGATCGCC TCGGCCCTGGACGAGCGCAGCGGCAAATTGTTGATCGGTGCGATTCCCACCGCGCGCAGCGGCATCACGCTCGGCCACGA TTGGGACAACATCGGCCAGCGCCAGACCGACAGCGGCAGCACCACCTTCGAGCGCGTCCGCGTGGAAGAAAGCGAGCTAT TGCTGGATCCCGGTCCGTTGAGCACTCCGTTCGCCTGTCTGCGCCCCTTGATCGCGCAGTTGCTGTTCGCGCATCTGTTC CTGGGGATTGCCGAGGGCGCATTCGAGGAAGCGCGCAGCTACACCCTGGGCGAAGCCCGCGCCTGGCACCGCTCCGGGGT CGAACAAGCCAGCCAAGACCCCTACATCCTGGCCCATTACGGCGAATTCTGGCTGGGCCTGGAAAGCGCCCGGCTGCTGA CCGACCGCGCTGCCGGATTGCTCGACGCCGCCTGGCGCAAGGAGCATGCGCTCGGCCGCGACGAGCGCGCGCAAGTCGCC TTGGCGGTGGCCGCCGCCAAGGTCGCCACCACACGCGTCGGGCTGGAGGTGTGCAGCAAACTCTTCGAGGTCACCGGCGC GCGTGCCACGCATGCAGCGCTGCGGCTGGACCGCTACTGGCGCAACCTGCGCACCCAGACGCTGCACGATCCGGTCGATT ACAAGCTGCGCGAACTCGGCGAATGGGCGCTGCGGCAACAGCCACCCACTCCCAGTTTCTATTCCTGA
Upstream 100 bases:
>100_bases TCCCGGATGCGACATGCCCAGCTGGCGATCTTCCGCACTACGTGCCGACCATTGTCCGGTCAGCGCCCCACTCCTTCGCA TCTGCACAAGGCCACCGCAC
Downstream 100 bases:
>100_bases GCCCGACGATGCGTCACCTGCATTTCCGACTCGGACCTCGCGTCCCGCCGTGTTGAACCGACGCCGCCTCGCGCCCTTCC TCCCCCACGCACGAGCCCGT
Product: FMNH2-dependent monooxygenase
Products: NA
Alternate protein names: DBT sulfur dioxygenase [H]
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTSRQPQPTLLNPLQTAQRLAAGFADTAIERDARGGTPKAERDALRASGLLALSIPVQYGGLGASWSEVLQVVRTFAKVD SSIAHVFGFHHLMLATVRLFGQPAQWQPWLEQTARKQWFWGNALNPLDTRTVAVQCEGWREFSGRKSFCSGAIDSQMLIA SALDERSGKLLIGAIPTARSGITLGHDWDNIGQRQTDSGSTTFERVRVEESELLLDPGPLSTPFACLRPLIAQLLFAHLF LGIAEGAFEEARSYTLGEARAWHRSGVEQASQDPYILAHYGEFWLGLESARLLTDRAAGLLDAAWRKEHALGRDERAQVA LAVAAAKVATTRVGLEVCSKLFEVTGARATHAALRLDRYWRNLRTQTLHDPVDYKLRELGEWALRQQPPTPSFYS
Sequences:
>Translated_395_residues MTSRQPQPTLLNPLQTAQRLAAGFADTAIERDARGGTPKAERDALRASGLLALSIPVQYGGLGASWSEVLQVVRTFAKVD SSIAHVFGFHHLMLATVRLFGQPAQWQPWLEQTARKQWFWGNALNPLDTRTVAVQCEGWREFSGRKSFCSGAIDSQMLIA SALDERSGKLLIGAIPTARSGITLGHDWDNIGQRQTDSGSTTFERVRVEESELLLDPGPLSTPFACLRPLIAQLLFAHLF LGIAEGAFEEARSYTLGEARAWHRSGVEQASQDPYILAHYGEFWLGLESARLLTDRAAGLLDAAWRKEHALGRDERAQVA LAVAAAKVATTRVGLEVCSKLFEVTGARATHAALRLDRYWRNLRTQTLHDPVDYKLRELGEWALRQQPPTPSFYS >Mature_394_residues TSRQPQPTLLNPLQTAQRLAAGFADTAIERDARGGTPKAERDALRASGLLALSIPVQYGGLGASWSEVLQVVRTFAKVDS SIAHVFGFHHLMLATVRLFGQPAQWQPWLEQTARKQWFWGNALNPLDTRTVAVQCEGWREFSGRKSFCSGAIDSQMLIAS ALDERSGKLLIGAIPTARSGITLGHDWDNIGQRQTDSGSTTFERVRVEESELLLDPGPLSTPFACLRPLIAQLLFAHLFL GIAEGAFEEARSYTLGEARAWHRSGVEQASQDPYILAHYGEFWLGLESARLLTDRAAGLLDAAWRKEHALGRDERAQVAL AVAAAKVATTRVGLEVCSKLFEVTGARATHAALRLDRYWRNLRTQTLHDPVDYKLRELGEWALRQQPPTPSFYS
Specific function: Part of a pathway to remove covalently bound sulfur from dibenzothiophene (DBT) without breaking carbon-carbon bonds. Sulfur dioxygenase which converts DBT to DBT-sulfone (DBTO2 or DBT 5,5-dioxide) [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI17508101, Length=334, Percent_Identity=23.3532934131737, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013107 - InterPro: IPR006092 - InterPro: IPR006091 - InterPro: IPR009075 - InterPro: IPR013786 - InterPro: IPR009100 [H]
Pfam domain/function: PF08028 Acyl-CoA_dh_2; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]
EC number: NA
Molecular weight: Translated: 43697; Mature: 43566
Theoretical pI: Translated: 8.03; Mature: 8.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRQPQPTLLNPLQTAQRLAAGFADTAIERDARGGTPKAERDALRASGLLALSIPVQYG CCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECEEEC GLGASWSEVLQVVRTFAKVDSSIAHVFGFHHLMLATVRLFGQPAQWQPWLEQTARKQWFW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC GNALNPLDTRTVAVQCEGWREFSGRKSFCSGAIDSQMLIASALDERSGKLLIGAIPTARS CCCCCCCCCCEEEEEECCHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC GITLGHDWDNIGQRQTDSGSTTFERVRVEESELLLDPGPLSTPFACLRPLIAQLLFAHLF CCEECCCHHHCCCCCCCCCCCHHHHHEECCHHEEECCCCCCCHHHHHHHHHHHHHHHHHH LGIAEGAFEEARSYTLGEARAWHRSGVEQASQDPYILAHYGEFWLGLESARLLTDRAAGL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH LDAAWRKEHALGRDERAQVALAVAAAKVATTRVGLEVCSKLFEVTGARATHAALRLDRYW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RNLRTQTLHDPVDYKLRELGEWALRQQPPTPSFYS HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure TSRQPQPTLLNPLQTAQRLAAGFADTAIERDARGGTPKAERDALRASGLLALSIPVQYG CCCCCCCHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCEEEEEECEEEC GLGASWSEVLQVVRTFAKVDSSIAHVFGFHHLMLATVRLFGQPAQWQPWLEQTARKQWFW CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCC GNALNPLDTRTVAVQCEGWREFSGRKSFCSGAIDSQMLIASALDERSGKLLIGAIPTARS CCCCCCCCCCEEEEEECCHHHHCCCHHHHCCCCCHHHHHHHHHHCCCCCEEEEECCCCCC GITLGHDWDNIGQRQTDSGSTTFERVRVEESELLLDPGPLSTPFACLRPLIAQLLFAHLF CCEECCCHHHCCCCCCCCCCCHHHHHEECCHHEEECCCCCCCHHHHHHHHHHHHHHHHHH LGIAEGAFEEARSYTLGEARAWHRSGVEQASQDPYILAHYGEFWLGLESARLLTDRAAGL HHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHHHHHH LDAAWRKEHALGRDERAQVALAVAAAKVATTRVGLEVCSKLFEVTGARATHAALRLDRYW HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH RNLRTQTLHDPVDYKLRELGEWALRQQPPTPSFYS HHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7961424; 7574582 [H]