| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is phuR [H]
Identifier: 21241593
GI number: 21241593
Start: 982889
End: 985237
Strand: Direct
Name: phuR [H]
Synonym: XAC0823
Alternate gene names: 21241593
Gene position: 982889-985237 (Clockwise)
Preceding gene: 21241592
Following gene: 21241594
Centisome position: 18.99
GC content: 64.92
Gene sequence:
>2349_bases GTGCGGAAAGATCGCAGCGGGCGCCGCCGCCGCCGCCCGTCACTCAACTCTATCTTCCCTGCCGCGCGCGGCTTATGCCG CAATGCGCGCTGCCGGGGGGACGCTCAAGGGCTCCTGATGATCCGCCTGCATCCGCTGGTGGTCGCGCTGTCGCTGGCGC TGCCTGCTATTTCCTTGTGTGCCCATGCTGCCGAACGCGATGCCGGAGCGGAGGGTGCGCGTGAGGTGCACGACTTCGAC CGGCTACAGGTCACCGCCACACGCACCCAACGCGCACTGGTGGATGTGCCCAGCACGGTGGATGTGATCGATCGCGAACA GCTCGACAACCAACTGGTGCGCGAACTCAAGGATCTGTTTCGCTACACGCCGGGCGTGTCGGTCACCAGCACCAGCGGCC GCTTCACCGGTGCCAACGGCATCCGCATCCGCGGGCTGGATGGCAACCGCGTGGCGATCCTGGTGGATAACGTGCCGGTG TCGGACACCTTCAGTTTCGGCAGCTATCTCAATGCCAACCGTAACTTCGTCGATCTGGAAACGCTCAAGCGCGTGGAAGT GGTACGCGGGCCGGCCAGCTCGTTGTATGGCTCGGATGCATTGGGCGGCGTGGTCGCCTTCGTCACCAAGGATCCTTCGG ATTATCTGAGCGCCGACAAGCACAGCTACGTCGGCCTGAAGTTCGGCTACGAAGGCGACTGGAACGGTCTGTTCGCCGGT GCCACCGGCGCGTTCGGTGGCGAACGCTGGAGCGGCATGGTGGCGGTGAGTCATCGCCAGGGCCAGGAAACGCAAAACCA AGGTGATCACCGCAGCCGCGATTTCGCCCGCACCGCGGCCAATCCGCAGCGCATCGATGGCCGCAGTGTGCTCGCCAAAC TGGTGTACGCGCCGAGCGCGCAGCAGCGCTTCAAGCTCACCGTGGAAGGCAACGAAGACTATGGCAGCATCGAGGCGTTG ACCGGCATCGACCCGCGTGTGACCACGCCATCGCTGCGCATCCTGTCGCAGGACGGACGCGACCATCAGACCCGCGCGCG CGTTTCGCTACGCCACGAACTGGATGCGCTGGATTGGGCGCTTGCCGACGATCTGCAGTGGCAGCTGTATCGCCAGGACA GCGAAAGCCTACAGCGTACCGACGAGCTGCGCGGCAACAACACCCGCCGTCATAACGAACACACCTTCGATCAGCGCGTG TACGGCGTGCTGTTCAACGCGCACAGGGCCATCGACACCGGCACGCTCAGCCACGACATCACCTATGGCCTGGACGGCAC CTGGACCGACACCCGCGCCAAGCGCGATGGTTACTCGGTCAATCTGGCCAATGGCGCGATCACCAATCGCGTCGGTCAGG ACGTGTTCCCGGTGCGCGATTTTCCCAAGAGCGAGACCACCAAGCTCGGGCTGTATGCGCAGGACGAGATCCGCCTGTTC GATGGCCAGCTGTCGCTGACGCCCGGGGTGCGCGTGGATTACTTCCGGCTGTCGCCGCAGGTGGACGCCATCTTCCGCGA AGACAATCCGGGCGTGGCTGCCGAGACCATCGATCAAACCCAGGTCTCGCCCAAGTTCGGCGTGGTGTGGCGGTTCTCCG ATGCATGGTCGGCGTACGCCAACTATGCGCATGGCTTCCGCGCGCCGCCGTACAACGACGTCAATATCGGCTTCACCAAT CTGCAGGCGCGCTATACCGCCATCGCCAATCCGGATCTGAAATCGGAGACCAGCCGCGGTGGCGAACTGGGCCTGCGTTT CAACGATGCAGTCGGCTATCTGGGCGTCAGCGTGTACTACACCGACTACCGCAACTTCATCGAATCGTATGCGCCGGCCG GCTTCAATGCCGAAGGGCTGATGCTGTTCCAGTCGCGCAACGTGGACGACGTGGTGATCAAGGGGGCCGAAGCGCGCGGC GGAATCGATCTGGGCGCCCTGGCCGGTTGGCAGGGTTGGTCGCTCAACAGCGCCCTGGCGTATGCGGAAGGCGACAATCT CACCGACGACACCCCGCTCAACTCGGTCGACCCGCTGCGCGGAACGCTCGGCGTGGCCTTCGACGGCGATGCCTGGGGCG CGGAGCTGATCGGCACCTTCGTCGCGCGCAAGCGTCGCCCGCAGCTGGACAGCTATTACACCCCGGCCGGCTACGCCACG CTGGATCTGATGGGCCACTGGGAATTCGCGCCTGGCGCCAAGGTCACTGCCGGCATCTTCAATCTGGCCGACCGCCGCTA CGTGGACTGGAATGCGCTGCCCAATGGCACGCTGGCCAGCAGCACGGTGCTCGATCGCTTCACCGGCGCCGGGCGCACTG CCTCGGTCAGCCTGGCGGTGAGCTGGTAG
Upstream 100 bases:
>100_bases CCGCAACGATCGCCGTGCGCCATCAGTGCCGATGACGCGATCTTTCTCCGCGCAACGCTCGATCGCCGTCGCATCCATTC GCCGCACTCGCTCAACGCGT
Downstream 100 bases:
>100_bases CGGCCATGCCCATCGCCCGCCCGCTGCCGTCGTTGTCGCATGCACGTGCCACCCGCGCCGCACTGCCGCGTCCGCAGCAA TTGGCGGCGTTGGGCACGGT
Product: outer membrane hemin receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 782; Mature: 782
Protein sequence:
>782_residues MRKDRSGRRRRRPSLNSIFPAARGLCRNARCRGDAQGLLMIRLHPLVVALSLALPAISLCAHAAERDAGAEGAREVHDFD RLQVTATRTQRALVDVPSTVDVIDREQLDNQLVRELKDLFRYTPGVSVTSTSGRFTGANGIRIRGLDGNRVAILVDNVPV SDTFSFGSYLNANRNFVDLETLKRVEVVRGPASSLYGSDALGGVVAFVTKDPSDYLSADKHSYVGLKFGYEGDWNGLFAG ATGAFGGERWSGMVAVSHRQGQETQNQGDHRSRDFARTAANPQRIDGRSVLAKLVYAPSAQQRFKLTVEGNEDYGSIEAL TGIDPRVTTPSLRILSQDGRDHQTRARVSLRHELDALDWALADDLQWQLYRQDSESLQRTDELRGNNTRRHNEHTFDQRV YGVLFNAHRAIDTGTLSHDITYGLDGTWTDTRAKRDGYSVNLANGAITNRVGQDVFPVRDFPKSETTKLGLYAQDEIRLF DGQLSLTPGVRVDYFRLSPQVDAIFREDNPGVAAETIDQTQVSPKFGVVWRFSDAWSAYANYAHGFRAPPYNDVNIGFTN LQARYTAIANPDLKSETSRGGELGLRFNDAVGYLGVSVYYTDYRNFIESYAPAGFNAEGLMLFQSRNVDDVVIKGAEARG GIDLGALAGWQGWSLNSALAYAEGDNLTDDTPLNSVDPLRGTLGVAFDGDAWGAELIGTFVARKRRPQLDSYYTPAGYAT LDLMGHWEFAPGAKVTAGIFNLADRRYVDWNALPNGTLASSTVLDRFTGAGRTASVSLAVSW
Sequences:
>Translated_782_residues MRKDRSGRRRRRPSLNSIFPAARGLCRNARCRGDAQGLLMIRLHPLVVALSLALPAISLCAHAAERDAGAEGAREVHDFD RLQVTATRTQRALVDVPSTVDVIDREQLDNQLVRELKDLFRYTPGVSVTSTSGRFTGANGIRIRGLDGNRVAILVDNVPV SDTFSFGSYLNANRNFVDLETLKRVEVVRGPASSLYGSDALGGVVAFVTKDPSDYLSADKHSYVGLKFGYEGDWNGLFAG ATGAFGGERWSGMVAVSHRQGQETQNQGDHRSRDFARTAANPQRIDGRSVLAKLVYAPSAQQRFKLTVEGNEDYGSIEAL TGIDPRVTTPSLRILSQDGRDHQTRARVSLRHELDALDWALADDLQWQLYRQDSESLQRTDELRGNNTRRHNEHTFDQRV YGVLFNAHRAIDTGTLSHDITYGLDGTWTDTRAKRDGYSVNLANGAITNRVGQDVFPVRDFPKSETTKLGLYAQDEIRLF DGQLSLTPGVRVDYFRLSPQVDAIFREDNPGVAAETIDQTQVSPKFGVVWRFSDAWSAYANYAHGFRAPPYNDVNIGFTN LQARYTAIANPDLKSETSRGGELGLRFNDAVGYLGVSVYYTDYRNFIESYAPAGFNAEGLMLFQSRNVDDVVIKGAEARG GIDLGALAGWQGWSLNSALAYAEGDNLTDDTPLNSVDPLRGTLGVAFDGDAWGAELIGTFVARKRRPQLDSYYTPAGYAT LDLMGHWEFAPGAKVTAGIFNLADRRYVDWNALPNGTLASSTVLDRFTGAGRTASVSLAVSW >Mature_782_residues MRKDRSGRRRRRPSLNSIFPAARGLCRNARCRGDAQGLLMIRLHPLVVALSLALPAISLCAHAAERDAGAEGAREVHDFD RLQVTATRTQRALVDVPSTVDVIDREQLDNQLVRELKDLFRYTPGVSVTSTSGRFTGANGIRIRGLDGNRVAILVDNVPV SDTFSFGSYLNANRNFVDLETLKRVEVVRGPASSLYGSDALGGVVAFVTKDPSDYLSADKHSYVGLKFGYEGDWNGLFAG ATGAFGGERWSGMVAVSHRQGQETQNQGDHRSRDFARTAANPQRIDGRSVLAKLVYAPSAQQRFKLTVEGNEDYGSIEAL TGIDPRVTTPSLRILSQDGRDHQTRARVSLRHELDALDWALADDLQWQLYRQDSESLQRTDELRGNNTRRHNEHTFDQRV YGVLFNAHRAIDTGTLSHDITYGLDGTWTDTRAKRDGYSVNLANGAITNRVGQDVFPVRDFPKSETTKLGLYAQDEIRLF DGQLSLTPGVRVDYFRLSPQVDAIFREDNPGVAAETIDQTQVSPKFGVVWRFSDAWSAYANYAHGFRAPPYNDVNIGFTN LQARYTAIANPDLKSETSRGGELGLRFNDAVGYLGVSVYYTDYRNFIESYAPAGFNAEGLMLFQSRNVDDVVIKGAEARG GIDLGALAGWQGWSLNSALAYAEGDNLTDDTPLNSVDPLRGTLGVAFDGDAWGAELIGTFVARKRRPQLDSYYTPAGYAT LDLMGHWEFAPGAKVTAGIFNLADRRYVDWNALPNGTLASSTVLDRFTGAGRTASVSLAVSW
Specific function: Acts as a receptor for hemoglobin or the hemoglobin/haptoglobin complex and is required for heme uptake [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1788478, Length=753, Percent_Identity=25.4980079681275, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI1786798, Length=200, Percent_Identity=28.5, Blast_Score=70, Evalue=4e-13, Organism=Escherichia coli, GI1790405, Length=141, Percent_Identity=34.0425531914894, Blast_Score=70, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010949 - InterPro: IPR010917 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 86055; Mature: 86055
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKDRSGRRRRRPSLNSIFPAARGLCRNARCRGDAQGLLMIRLHPLVVALSLALPAISLC CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH AHAAERDAGAEGAREVHDFDRLQVTATRTQRALVDVPSTVDVIDREQLDNQLVRELKDLF HHHHHCCCCCCCHHHHHHHHHEEEEEEHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH RYTPGVSVTSTSGRFTGANGIRIRGLDGNRVAILVDNVPVSDTFSFGSYLNANRNFVDLE HHCCCCEEECCCCCEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHH TLKRVEVVRGPASSLYGSDALGGVVAFVTKDPSDYLSADKHSYVGLKFGYEGDWNGLFAG HHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEEECCCCCCCCEEEC ATGAFGGERWSGMVAVSHRQGQETQNQGDHRSRDFARTAANPQRIDGRSVLAKLVYAPSA CCCCCCCCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC QQRFKLTVEGNEDYGSIEALTGIDPRVTTPSLRILSQDGRDHQTRARVSLRHELDALDWA CCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH LADDLQWQLYRQDSESLQRTDELRGNNTRRHNEHTFDQRVYGVLFNAHRAIDTGTLSHDI HHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE TYGLDGTWTDTRAKRDGYSVNLANGAITNRVGQDVFPVRDFPKSETTKLGLYAQDEIRLF EECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEE DGQLSLTPGVRVDYFRLSPQVDAIFREDNPGVAAETIDQTQVSPKFGVVWRFSDAWSAYA CCEEEECCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHCCCCCEEEEEEECHHHHHHH NYAHGFRAPPYNDVNIGFTNLQARYTAIANPDLKSETSRGGELGLRFNDAVGYLGVSVYY HHHCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEE TDYRNFIESYAPAGFNAEGLMLFQSRNVDDVVIKGAEARGGIDLGALAGWQGWSLNSALA HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCEEE YAEGDNLTDDTPLNSVDPLRGTLGVAFDGDAWGAELIGTFVARKRRPQLDSYYTPAGYAT EECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE LDLMGHWEFAPGAKVTAGIFNLADRRYVDWNALPNGTLASSTVLDRFTGAGRTASVSLAV EEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEE SW EC >Mature Secondary Structure MRKDRSGRRRRRPSLNSIFPAARGLCRNARCRGDAQGLLMIRLHPLVVALSLALPAISLC CCCCCCCHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHH AHAAERDAGAEGAREVHDFDRLQVTATRTQRALVDVPSTVDVIDREQLDNQLVRELKDLF HHHHHCCCCCCCHHHHHHHHHEEEEEEHHCCCEEECCCCHHHHHHHHHHHHHHHHHHHHH RYTPGVSVTSTSGRFTGANGIRIRGLDGNRVAILVDNVPVSDTFSFGSYLNANRNFVDLE HHCCCCEEECCCCCEECCCCEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCEEEHH TLKRVEVVRGPASSLYGSDALGGVVAFVTKDPSDYLSADKHSYVGLKFGYEGDWNGLFAG HHHHHHHHCCCHHHHCCCCCCCCEEEEEECCCHHHHCCCCCCEEEEEECCCCCCCCEEEC ATGAFGGERWSGMVAVSHRQGQETQNQGDHRSRDFARTAANPQRIDGRSVLAKLVYAPSA CCCCCCCCCCCCEEEEECCCCCCHHCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCC QQRFKLTVEGNEDYGSIEALTGIDPRVTTPSLRILSQDGRDHQTRARVSLRHELDALDWA CCEEEEEEECCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH LADDLQWQLYRQDSESLQRTDELRGNNTRRHNEHTFDQRVYGVLFNAHRAIDTGTLSHDI HHCCCEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCE TYGLDGTWTDTRAKRDGYSVNLANGAITNRVGQDVFPVRDFPKSETTKLGLYAQDEIRLF EECCCCCCCCCCCCCCCCEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEEEEECCCEEEE DGQLSLTPGVRVDYFRLSPQVDAIFREDNPGVAAETIDQTQVSPKFGVVWRFSDAWSAYA CCEEEECCCCEEEEEEECCCEEEEEECCCCCCCHHCCHHHCCCCCEEEEEEECHHHHHHH NYAHGFRAPPYNDVNIGFTNLQARYTAIANPDLKSETSRGGELGLRFNDAVGYLGVSVYY HHHCCCCCCCCCCCCCEEECCEEEEEEECCCCCCCCCCCCCEEEEEECCCCCEEEEEEEE TDYRNFIESYAPAGFNAEGLMLFQSRNVDDVVIKGAEARGGIDLGALAGWQGWSLNSALA HHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCEEE YAEGDNLTDDTPLNSVDPLRGTLGVAFDGDAWGAELIGTFVARKRRPQLDSYYTPAGYAT EECCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEE LDLMGHWEFAPGAKVTAGIFNLADRRYVDWNALPNGTLASSTVLDRFTGAGRTASVSLAV EEEEECCCCCCCCCHHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEEE SW EC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]