| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is metK [H]
Identifier: 21241583
GI number: 21241583
Start: 970568
End: 971779
Strand: Reverse
Name: metK [H]
Synonym: XAC0813
Alternate gene names: 21241583
Gene position: 971779-970568 (Counterclockwise)
Preceding gene: 21241585
Following gene: 21241574
Centisome position: 18.78
GC content: 64.69
Gene sequence:
>1212_bases ATGTCCAGCTACCTGTTCACCTCCGAATCGGTCTCCGAAGGCCATCCGGACAAGATCGCCGACCAGATCTCCGACGCAGT GCTGGACGCCATCCTGGCGCAGGACAAGCGCGCCCGCGTGGCCTGCGAGACGATGGTCAAGACCGGCGTTGCGATCGTGG CCGGCGAAGTGACCACCAGTGCCTGGATCGATCTGGAAGCGCTGACCCGCAAGGTCATTCTGGACATCGGCTACAACAGT TCCGACGTCGGCTTCGACGGCGAGACCTGTGGCGTGCTCAACCTGATCGGCAAGCAGTCGCCGGACATCAACCAGGGCGT GGATCGCAAGAACCCCGAGCAGCAGGGTGCGGGCGACCAGGGCCTGATGTTCGGCTATGCCACCAACGAAACCGACAGCT TCATGCCGGCGGCGATCCACCTCTCGCACCGCCTGGTCGAGCAGCAGGCCAAGATCCGCAAGAAGAAGAACTCGGCGCTG TCCTGGCTGCGTCCGGACGCCAAGTCGCAGGTCACCCTGCGCTATGAAGACGGCGTGGCGACGGCGATCGATGCGGTGGT GCTGTCGACCCAGCACGACCCGGGCGTGAAGCAGAAGGACCTGATCGAAGCGGTGCGCGAGGAAATCCTCAAGCCGGTGC TGCCGGCCAAGTGGCTGCACAAGGGCACCAAGTTCCACATCAACCCGACCGGCAAGTTCGTGATCGGCGGCCCGGTGGGC GATTGCGGCCTGACCGGTCGCAAGATCATCGTCGACACCTACGGCGGCTGGGCGCGTCACGGTGGTGGCGCGTTCTCCGG CAAGGATCCGTCCAAGGTCGACCGTTCGGCTGCCTATGCCGCGCGCTACGTGGCCAAGAACGTGGTGGCCGCCGGCCTGG CCGACCGTTGCGAAGTGCAGGTCTCCTACGCCATCGGCGTGGCCGAGCCGACCTCGATTTCGGTCACCACCTTCGGCACC GGCAAGATCGCCGACGAGCAGATCGAAAAGCTGATCCGCAAGCATTTCGACCTGCGTCCGTTCGGCATCATCCAGATGCT CGACCTGATCCACCCGATGTATCAGCAGACCGCGTCTTACGGCCACTTCGGCCGCAAGCCGAAGGACTTCACCTACACCG ACGGCACCGGCGCGCAGCACAGCGCGACCTCGTTCTCGTGGGAAAAGACCGACCGCGCCGACGCACTGCGTGCCGCCGCC AAGCTGAAGTAA
Upstream 100 bases:
>100_bases TAACCCCAAAGCGATCCATTCAGGCGCACAATGCAACCGACACACGGGGCGTGTATCATCCGCACCCATCTTTTCATCCG AATTAAGGGATATAAGCCTG
Downstream 100 bases:
>100_bases GCCAACTGCTCCTGCGGGAGTGAAACCGGCAAGAAGTGAGATGGGCCGCACATGCGGCCCATCTGCGTTTTGGCGGAATG CGTACAGTCATCGAGGCTAG
Product: S-adenosylmethionine synthetase
Products: NA
Alternate protein names: AdoMet synthase; MAT; Methionine adenosyltransferase [H]
Number of amino acids: Translated: 403; Mature: 402
Protein sequence:
>403_residues MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNS SDVGFDGETCGVLNLIGKQSPDINQGVDRKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSAL SWLRPDAKSQVTLRYEDGVATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVG DCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGT GKIADEQIEKLIRKHFDLRPFGIIQMLDLIHPMYQQTASYGHFGRKPKDFTYTDGTGAQHSATSFSWEKTDRADALRAAA KLK
Sequences:
>Translated_403_residues MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNS SDVGFDGETCGVLNLIGKQSPDINQGVDRKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSAL SWLRPDAKSQVTLRYEDGVATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVG DCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGT GKIADEQIEKLIRKHFDLRPFGIIQMLDLIHPMYQQTASYGHFGRKPKDFTYTDGTGAQHSATSFSWEKTDRADALRAAA KLK >Mature_402_residues SSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTSAWIDLEALTRKVILDIGYNSS DVGFDGETCGVLNLIGKQSPDINQGVDRKNPEQQGAGDQGLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSALS WLRPDAKSQVTLRYEDGVATAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVGD CGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQVSYAIGVAEPTSISVTTFGTG KIADEQIEKLIRKHFDLRPFGIIQMLDLIHPMYQQTASYGHFGRKPKDFTYTDGTGAQHSATSFSWEKTDRADALRAAAK LK
Specific function: Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the e
COG id: COG0192
COG function: function code H; S-adenosylmethionine synthetase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AdoMet synthase family [H]
Homologues:
Organism=Homo sapiens, GI5174529, Length=381, Percent_Identity=54.3307086614173, Blast_Score=390, Evalue=1e-108, Organism=Homo sapiens, GI4557737, Length=367, Percent_Identity=55.3133514986376, Blast_Score=387, Evalue=1e-107, Organism=Escherichia coli, GI1789311, Length=403, Percent_Identity=70.2233250620347, Blast_Score=588, Evalue=1e-169, Organism=Caenorhabditis elegans, GI17551082, Length=369, Percent_Identity=55.0135501355014, Blast_Score=393, Evalue=1e-109, Organism=Caenorhabditis elegans, GI17538498, Length=368, Percent_Identity=55.7065217391304, Blast_Score=388, Evalue=1e-108, Organism=Caenorhabditis elegans, GI17538494, Length=368, Percent_Identity=55.4347826086957, Blast_Score=385, Evalue=1e-107, Organism=Caenorhabditis elegans, GI25145633, Length=376, Percent_Identity=54.5212765957447, Blast_Score=382, Evalue=1e-106, Organism=Caenorhabditis elegans, GI32565905, Length=368, Percent_Identity=50, Blast_Score=324, Evalue=4e-89, Organism=Caenorhabditis elegans, GI32565911, Length=318, Percent_Identity=52.8301886792453, Blast_Score=313, Evalue=8e-86, Organism=Caenorhabditis elegans, GI25145635, Length=326, Percent_Identity=51.5337423312883, Blast_Score=307, Evalue=7e-84, Organism=Caenorhabditis elegans, GI32565903, Length=295, Percent_Identity=52.2033898305085, Blast_Score=281, Evalue=4e-76, Organism=Caenorhabditis elegans, GI32565909, Length=82, Percent_Identity=62.1951219512195, Blast_Score=108, Evalue=7e-24, Organism=Caenorhabditis elegans, GI32565907, Length=46, Percent_Identity=71.7391304347826, Blast_Score=70, Evalue=2e-12, Organism=Saccharomyces cerevisiae, GI6323209, Length=381, Percent_Identity=54.5931758530184, Blast_Score=383, Evalue=1e-107, Organism=Saccharomyces cerevisiae, GI6320710, Length=381, Percent_Identity=54.0682414698163, Blast_Score=380, Evalue=1e-106, Organism=Drosophila melanogaster, GI45552159, Length=369, Percent_Identity=53.3875338753388, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580529, Length=369, Percent_Identity=53.3875338753388, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580537, Length=369, Percent_Identity=53.3875338753388, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580533, Length=369, Percent_Identity=53.3875338753388, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580535, Length=369, Percent_Identity=53.3875338753388, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580531, Length=369, Percent_Identity=53.3875338753388, Blast_Score=367, Evalue=1e-101, Organism=Drosophila melanogaster, GI24580527, Length=369, Percent_Identity=53.1165311653117, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580525, Length=369, Percent_Identity=53.1165311653117, Blast_Score=362, Evalue=1e-100, Organism=Drosophila melanogaster, GI24580541, Length=368, Percent_Identity=51.0869565217391, Blast_Score=338, Evalue=3e-93, Organism=Drosophila melanogaster, GI24580539, Length=120, Percent_Identity=51.6666666666667, Blast_Score=124, Evalue=9e-29,
Paralogues:
None
Copy number: 7,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022631 - InterPro: IPR022630 - InterPro: IPR022629 - InterPro: IPR022628 - InterPro: IPR002133 - InterPro: IPR022636 [H]
Pfam domain/function: PF02773 S-AdoMet_synt_C; PF02772 S-AdoMet_synt_M; PF00438 S-AdoMet_synt_N [H]
EC number: =2.5.1.6 [H]
Molecular weight: Translated: 43663; Mature: 43532
Theoretical pI: Translated: 8.01; Mature: 8.01
Prosite motif: PS00376 ADOMET_SYNTHETASE_1 ; PS00377 ADOMET_SYNTHETASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTS CCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCHHH AWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVDRKNPEQQGAGDQ HEEEHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCC GLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDGVA CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH TAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVG HHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCEEECCCCC DCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQ CCCCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VSYAIGVAEPTSISVTTFGTGKIADEQIEKLIRKHFDLRPFGIIQMLDLIHPMYQQTASY EEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC GHFGRKPKDFTYTDGTGAQHSATSFSWEKTDRADALRAAAKLK CCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SSYLFTSESVSEGHPDKIADQISDAVLDAILAQDKRARVACETMVKTGVAIVAGEVTTS CCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEECCCHHH AWIDLEALTRKVILDIGYNSSDVGFDGETCGVLNLIGKQSPDINQGVDRKNPEQQGAGDQ HEEEHHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCC GLMFGYATNETDSFMPAAIHLSHRLVEQQAKIRKKKNSALSWLRPDAKSQVTLRYEDGVA CEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHH TAIDAVVLSTQHDPGVKQKDLIEAVREEILKPVLPAKWLHKGTKFHINPTGKFVIGGPVG HHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCEEEECCCCCEEECCCCC DCGLTGRKIIVDTYGGWARHGGGAFSGKDPSKVDRSAAYAARYVAKNVVAAGLADRCEVQ CCCCCCCEEEEECCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE VSYAIGVAEPTSISVTTFGTGKIADEQIEKLIRKHFDLRPFGIIQMLDLIHPMYQQTASY EEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC GHFGRKPKDFTYTDGTGAQHSATSFSWEKTDRADALRAAAKLK CCCCCCCCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA