| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241572
Identifier: 21241572
GI number: 21241572
Start: 952003
End: 952935
Strand: Direct
Name: 21241572
Synonym: XAC0802
Alternate gene names: NA
Gene position: 952003-952935 (Clockwise)
Preceding gene: 21241571
Following gene: 21241573
Centisome position: 18.39
GC content: 65.27
Gene sequence:
>933_bases GTGGGCATGCCCTCCAAGCAGCGCGAATATTCCAATCGCTTTTTCGACTCGACAGTCTGGAACGACTTCGCCTTTCGTGA CGACGATGTCGTCATCGCCAGCTATGCCAAGGCAGGGACGACCTGGGTGCAGCAGATCGTCGCGCAACTGATCTTCGGCG GCGCCGAGGAGATCGAGGTCTCGCGGCTGTCGCCCTGGTTCGACTCGGTGTATCCGGACAAGGCCACCAAGCAGCGCCTG CTCGCCGAGCAGCGCCATCGCCGCTTCGTGAAAACGCATCTGCCCGCCGATGCGCTGGTGCTGTCCGAACGTGCCCGCTA TCTCTACGTTGGCCGCGATGCGCGCGACATCGTCTGGAGCCTGTACGACCACCAGCGGGCAGTTAGCGCGGATGCGCAGG CGCGTCTGGATGCGGAGCCGTCCAGCAACGGTAAATTGAGGGTGATGCCGCCGCCCACGTGCTCGGTCGAGGACTATTTC CAGACCTGGATGCGTGCGGACGGTGCGCCGCTGTGGCCGTTCTGGGAGGGCATGCGTTCCTGGTGGGCGCTGCGCGATTA CGACAACGTGCTGCTGGTGCATTACGCCGCGTTGCTGCACGACCTGCCTGCACAAGTGCGGCGCATTGCCGCATTCCTGG ATATCCCGCTGGATGCCCCGTGCTGCGAGCGCGTGCTGGCGCACTGCAGTCTGGACTACATGCGCGCGCATGCGGCGCGC TACGTTCCACAGGGCGCCGGTTTCTGGCGCAACGGCGGTGGAGCCTTCTTCAATCAGGGTCTCAATGGGCGGTGGCGCGA CCGACTGGCGCCGGCAGTCGATACGGCCTATCGGCAGCATGTTGTCGCCGAGCTTGGCGCCGAGTGCGCGCGTTGGCTGG CCACGGGCGATGTTGCGTCGTCGGCGCACGCGACGACCGGGATGGTTGCTTAG
Upstream 100 bases:
>100_bases GGCCTTCGAGCCGGGCGCGGATGTGGATCATGCGGCTGCGAGGTGTTGGCGCGTGCACAGCCGATGAGTCCGATGCGATG ACAACCGACAGGACGCCGAT
Downstream 100 bases:
>100_bases GGGTGGCTAGCGAGTCTTTCGCGGAGAACGGTATGGGTGGATCGTCGGCGCACGCCTACGATCAGGTGTCGCAGTACTAC GATCGCCTGAGGGACCACTG
Product: sulfotransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 310; Mature: 309
Protein sequence:
>310_residues MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEVSRLSPWFDSVYPDKATKQRL LAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWSLYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYF QTWMRADGAPLWPFWEGMRSWWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR YVPQGAGFWRNGGGAFFNQGLNGRWRDRLAPAVDTAYRQHVVAELGAECARWLATGDVASSAHATTGMVA
Sequences:
>Translated_310_residues MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEVSRLSPWFDSVYPDKATKQRL LAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWSLYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYF QTWMRADGAPLWPFWEGMRSWWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR YVPQGAGFWRNGGGAFFNQGLNGRWRDRLAPAVDTAYRQHVVAELGAECARWLATGDVASSAHATTGMVA >Mature_309_residues GMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEVSRLSPWFDSVYPDKATKQRLL AEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWSLYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYFQ TWMRADGAPLWPFWEGMRSWWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAARY VPQGAGFWRNGGGAFFNQGLNGRWRDRLAPAVDTAYRQHVVAELGAECARWLATGDVASSAHATTGMVA
Specific function: Involved in the synthesis of cell wall sulfolipids [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sulfotransferase 1 family [H]
Homologues:
Organism=Homo sapiens, GI31563388, Length=268, Percent_Identity=25.3731343283582, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI31563386, Length=268, Percent_Identity=25.3731343283582, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI28830308, Length=273, Percent_Identity=26.7399267399267, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI4885617, Length=279, Percent_Identity=22.9390681003584, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI4507305, Length=272, Percent_Identity=23.1617647058824, Blast_Score=88, Evalue=1e-17, Organism=Homo sapiens, GI56847626, Length=268, Percent_Identity=21.6417910447761, Blast_Score=86, Evalue=5e-17, Organism=Homo sapiens, GI29550928, Length=266, Percent_Identity=22.9323308270677, Blast_Score=84, Evalue=1e-16, Organism=Homo sapiens, GI29540539, Length=256, Percent_Identity=23.4375, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI29540537, Length=256, Percent_Identity=23.4375, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI29540535, Length=256, Percent_Identity=23.4375, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI29540531, Length=256, Percent_Identity=23.4375, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI29029530, Length=283, Percent_Identity=21.9081272084806, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI29550893, Length=256, Percent_Identity=23.828125, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4507303, Length=256, Percent_Identity=23.828125, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI29540545, Length=284, Percent_Identity=23.2394366197183, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI29550921, Length=253, Percent_Identity=22.1343873517787, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI10835035, Length=253, Percent_Identity=22.1343873517787, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI62868225, Length=253, Percent_Identity=22.1343873517787, Blast_Score=73, Evalue=4e-13, Organism=Homo sapiens, GI62868223, Length=253, Percent_Identity=22.1343873517787, Blast_Score=73, Evalue=4e-13, Organism=Drosophila melanogaster, GI221468277, Length=229, Percent_Identity=24.8908296943231, Blast_Score=70, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000863 [H]
Pfam domain/function: PF00685 Sulfotransfer_1 [H]
EC number: NA
Molecular weight: Translated: 35113; Mature: 34982
Theoretical pI: Translated: 7.26; Mature: 7.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEV CCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHEEH SRLSPWFDSVYPDKATKQRLLAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWS HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCHHHHHHH LYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYFQTWMRADGAPLWPFWEGMRS HHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH WWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YVPQGAGFWRNGGGAFFNQGLNGRWRDRLAPAVDTAYRQHVVAELGAECARWLATGDVAS HCCCCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC SAHATTGMVA CCCCCCCCCC >Mature Secondary Structure GMPSKQREYSNRFFDSTVWNDFAFRDDDVVIASYAKAGTTWVQQIVAQLIFGGAEEIEV CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCHHHEEH SRLSPWFDSVYPDKATKQRLLAEQRHRRFVKTHLPADALVLSERARYLYVGRDARDIVWS HHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCEEEECCCHHHHHHH LYDHQRAVSADAQARLDAEPSSNGKLRVMPPPTCSVEDYFQTWMRADGAPLWPFWEGMRS HHHHHHHHCCCHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHH WWALRDYDNVLLVHYAALLHDLPAQVRRIAAFLDIPLDAPCCERVLAHCSLDYMRAHAAR HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH YVPQGAGFWRNGGGAFFNQGLNGRWRDRLAPAVDTAYRQHVVAELGAECARWLATGDVAS HCCCCCCCEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHC SAHATTGMVA CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA