| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
Click here to switch to the map view.
The map label for this gene is 21241570
Identifier: 21241570
GI number: 21241570
Start: 950001
End: 950666
Strand: Direct
Name: 21241570
Synonym: XAC0800
Alternate gene names: NA
Gene position: 950001-950666 (Clockwise)
Preceding gene: 21241569
Following gene: 21241571
Centisome position: 18.36
GC content: 64.11
Gene sequence:
>666_bases GTGCGCGCGCCAGTCCGATCGCCGCGCGGTCGGCTGATGGTGATTCAACGTAGTCGTGCGGACGCCTGCGCGCTACCCTG GCGCTCTTTGTCGCCGCACAGTCTGCTCATGTCGATCGTCTTGACCCCGTTCGCCCGCACCCGCCTGTTTCCGCGCGATG GGCGTCGCAATGCCATCCAGGACTGCACGCCGGAGCAGTTCATCCAGCGGCTCAACGACGCTGCGCCGCTACGCGTGATC GAGGGCTATGCGCCGTTTTGCCAATTGCATGTGCACCGCAACTGGACTTCGACCCGCTGCCTCACTATTCCCATCACCGA TGACAACCGGCACCTGCTGCGTTCCGGCTACGAGGCGCGCAGCACGCAGGAATTGGCCGTGCTGGTGCGTTGGTTCGAAG GTGTCGAGCCAACGGTGGCCGCCTATCTGCTGCCCATCCTCTACAGCCGCGAGCAGTTGGCCAAGGAAGGCACGCCCATC GAGGCTGACTGGGGTGTGGTCGGTTGTCTCTACACCGCAGAGCCGGACGAAATTCCGATGGCACCGATCACCATGTTGCG CAATGCCTTGGGTGTGGAAGAGGGTGGCTCGGGCACGCTGCTGGACCGCGATGCGTATCGGCGTAGCGTGGCGTTCTGGG AGCGCAATGCCAATTGGCGTGGGTGA
Upstream 100 bases:
>100_bases AGACGGATCCAGCTCCACCGCGTGCGCCACACCGCTGCGTGATGCGTACCTGCATGGTGTCGGTGGGTGTTTGGTGACTG CCCGAAACCAGGCTGAGTAG
Downstream 100 bases:
>100_bases GCGTGTCGCTCTGGTCCGCGTTCTCGTCCGCCAATTGAATTGCGCGTGGTGCGTGTAGTTGCCACATCCATCCCGACTGC CAGTACCGGGACGTACGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 221; Mature: 221
Protein sequence:
>221_residues MRAPVRSPRGRLMVIQRSRADACALPWRSLSPHSLLMSIVLTPFARTRLFPRDGRRNAIQDCTPEQFIQRLNDAAPLRVI EGYAPFCQLHVHRNWTSTRCLTIPITDDNRHLLRSGYEARSTQELAVLVRWFEGVEPTVAAYLLPILYSREQLAKEGTPI EADWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGGSGTLLDRDAYRRSVAFWERNANWRG
Sequences:
>Translated_221_residues MRAPVRSPRGRLMVIQRSRADACALPWRSLSPHSLLMSIVLTPFARTRLFPRDGRRNAIQDCTPEQFIQRLNDAAPLRVI EGYAPFCQLHVHRNWTSTRCLTIPITDDNRHLLRSGYEARSTQELAVLVRWFEGVEPTVAAYLLPILYSREQLAKEGTPI EADWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGGSGTLLDRDAYRRSVAFWERNANWRG >Mature_221_residues MRAPVRSPRGRLMVIQRSRADACALPWRSLSPHSLLMSIVLTPFARTRLFPRDGRRNAIQDCTPEQFIQRLNDAAPLRVI EGYAPFCQLHVHRNWTSTRCLTIPITDDNRHLLRSGYEARSTQELAVLVRWFEGVEPTVAAYLLPILYSREQLAKEGTPI EADWGVVGCLYTAEPDEIPMAPITMLRNALGVEEGGSGTLLDRDAYRRSVAFWERNANWRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25114; Mature: 25114
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPVRSPRGRLMVIQRSRADACALPWRSLSPHSLLMSIVLTPFARTRLFPRDGRRNAIQ CCCCCCCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH DCTPEQFIQRLNDAAPLRVIEGYAPFCQLHVHRNWTSTRCLTIPITDDNRHLLRSGYEAR CCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHCCCCCC STQELAVLVRWFEGVEPTVAAYLLPILYSREQLAKEGTPIEADWGVVGCLYTAEPDEIPM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC APITMLRNALGVEEGGSGTLLDRDAYRRSVAFWERNANWRG HHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MRAPVRSPRGRLMVIQRSRADACALPWRSLSPHSLLMSIVLTPFARTRLFPRDGRRNAIQ CCCCCCCCCCCEEEEECCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHH DCTPEQFIQRLNDAAPLRVIEGYAPFCQLHVHRNWTSTRCLTIPITDDNRHLLRSGYEAR CCCHHHHHHHHCCCCCEEEECCCCCEEEEEEECCCCCCEEEEEEEECCCHHHHHCCCCCC STQELAVLVRWFEGVEPTVAAYLLPILYSREQLAKEGTPIEADWGVVGCLYTAEPDEIPM CHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC APITMLRNALGVEEGGSGTLLDRDAYRRSVAFWERNANWRG HHHHHHHHHHCCCCCCCCCEECHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA