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The map label for this gene is amy [C]

Identifier: 21241568

GI number: 21241568

Start: 947237

End: 948664

Strand: Reverse

Name: amy [C]

Synonym: XAC0798

Alternate gene names: 21241568

Gene position: 948664-947237 (Counterclockwise)

Preceding gene: 21241574

Following gene: 21241566

Centisome position: 18.33

GC content: 62.04

Gene sequence:

>1428_bases
ATGCGCAACACGCCTGCTCATGCTCCACCCTCACTGATACAATGCGGTGTCCGTCTCTTGCTGACTGCATTGGTCCTGCT
GGTGACCACCGCCAACGCGCAGGCCGATGTCATCCTGCACGCCTTCAACTGGCCGTATGCCACCGTGGAAGCGCGCGCCA
AGCAGATTGCCGATGCCGGCTATCGCAAGGTATTGGTCGCCCCCGCGTACCGCTCCGAAGGAAGTGCCTGGTGGGCGCGC
TATCAACCCCAGGACATCCGCCTGATCGACAATCCGCTCGGCGACACCGCTGCATTCAAGAAGATGGTCCAGGCGCTGGC
CAGCAACGGCGTGGAAACCTATGCCGACATCGTGTTCAACCACATGGCCAACGAAGCGGCCACACGCTCGGACCTCAATT
ACCCAGGCGGCGCGGTCCTGTCGCAGTACGCGGCAAACCCCGGCCGTTACGATTCGCTGCGCTTGTTCGGCACGCTGCAG
TCAAACTTCCTCAGCGCCAGCGATTTCGGCCCGGCGCAGTGCATCAGCAACTACAACGACGCTTACCAGGTGCGCAATTA
CCGTATCTGCGGCGGCGGCAGCGATCCAGGCCTGCCGGATTTGCTGGGCAACGACTGGGTGGTACAGCAGCAGCGCGCCT
ATCTGCAGGCGCTCAAGAGCATGGGCGTGACCGGCTTCCGGGTGGATGCGGCCAAGCACATGACGTTCGACCATCTCAAT
CGCGTCTTCGATGCCGGCATCCGATCGGGTGTGTATGTCTTCGGCGAAGTGATCACCGGCGGCGGTACGGGCAATGGCGA
TTACGACCAGTTCCTGGCGCCGTACCTGCAATCCACGCCGCATGCGGCCTACGACTTTCCGCTGTTCAATGCGGTGCGCA
ACGCGTTCGCCATTGGCGCCAGCATGCAGCAGCTGGTGGATCCCGCCGCGTCCGGACAGGCATTGCCGGGCAATCGCGCC
GTGACCTTTGCAGTGACCCACGACATTCCCAACAACGCCGGATTCCGCTATGCGATTCTCGACCCGGTGGATGAAACGCT
GGCCTACGCGTACCTGATCGGTCGCAACGGCGGCATGCCGATGCTTTATACCGACAACAACGAAAGCGGCGACAATCGCT
GGGTCAACGCTTATCTACGCGACGATCTGCGCCGCATGATCGGCTTCCATAATGGCGTGCAGGGCACCGACATGCAGGTC
TTGTCGTCCAGCTCCTGCCACATCCTGTTCCGTCGCGGCAGCCTGGGCATCGTGGGCATCAACAAGTGCGGCAACCCGGT
CACCACCACGGTGGGAATGAACAACAGCGTGTTGTACTGGAATGCCGATTACGTGGATGCCTTGGGCTCGGGCAACGTAG
TGCGCATTTCCAGTAGTTCCTACACCTTTACGCTGCCGGCGCGCGGGGCGCGCATGTGGCGCCGCTGA

Upstream 100 bases:

>100_bases
TGCACGCCGTGCGCGCGCTTTCCGGAACAGGGGCCGGAAGCCCTGATGCGGGCATCGCGCACTGCGCGTCGGCCTGCGCT
TACCACTGGAGATCGATCCG

Downstream 100 bases:

>100_bases
GCGGCCACCACAATATGGCGATGACACTACGTTGCAGTGTACTCTCCGCTTGAAACGGCGACTGCGGCGTGCCTTGCGAC
TTCGCACGACGACGCTGCAC

Product: alpha-amylase

Products: NA

Alternate protein names: 1,4-alpha-D-glucan glucanohydrolase [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MRNTPAHAPPSLIQCGVRLLLTALVLLVTTANAQADVILHAFNWPYATVEARAKQIADAGYRKVLVAPAYRSEGSAWWAR
YQPQDIRLIDNPLGDTAAFKKMVQALASNGVETYADIVFNHMANEAATRSDLNYPGGAVLSQYAANPGRYDSLRLFGTLQ
SNFLSASDFGPAQCISNYNDAYQVRNYRICGGGSDPGLPDLLGNDWVVQQQRAYLQALKSMGVTGFRVDAAKHMTFDHLN
RVFDAGIRSGVYVFGEVITGGGTGNGDYDQFLAPYLQSTPHAAYDFPLFNAVRNAFAIGASMQQLVDPAASGQALPGNRA
VTFAVTHDIPNNAGFRYAILDPVDETLAYAYLIGRNGGMPMLYTDNNESGDNRWVNAYLRDDLRRMIGFHNGVQGTDMQV
LSSSSCHILFRRGSLGIVGINKCGNPVTTTVGMNNSVLYWNADYVDALGSGNVVRISSSSYTFTLPARGARMWRR

Sequences:

>Translated_475_residues
MRNTPAHAPPSLIQCGVRLLLTALVLLVTTANAQADVILHAFNWPYATVEARAKQIADAGYRKVLVAPAYRSEGSAWWAR
YQPQDIRLIDNPLGDTAAFKKMVQALASNGVETYADIVFNHMANEAATRSDLNYPGGAVLSQYAANPGRYDSLRLFGTLQ
SNFLSASDFGPAQCISNYNDAYQVRNYRICGGGSDPGLPDLLGNDWVVQQQRAYLQALKSMGVTGFRVDAAKHMTFDHLN
RVFDAGIRSGVYVFGEVITGGGTGNGDYDQFLAPYLQSTPHAAYDFPLFNAVRNAFAIGASMQQLVDPAASGQALPGNRA
VTFAVTHDIPNNAGFRYAILDPVDETLAYAYLIGRNGGMPMLYTDNNESGDNRWVNAYLRDDLRRMIGFHNGVQGTDMQV
LSSSSCHILFRRGSLGIVGINKCGNPVTTTVGMNNSVLYWNADYVDALGSGNVVRISSSSYTFTLPARGARMWRR
>Mature_475_residues
MRNTPAHAPPSLIQCGVRLLLTALVLLVTTANAQADVILHAFNWPYATVEARAKQIADAGYRKVLVAPAYRSEGSAWWAR
YQPQDIRLIDNPLGDTAAFKKMVQALASNGVETYADIVFNHMANEAATRSDLNYPGGAVLSQYAANPGRYDSLRLFGTLQ
SNFLSASDFGPAQCISNYNDAYQVRNYRICGGGSDPGLPDLLGNDWVVQQQRAYLQALKSMGVTGFRVDAAKHMTFDHLN
RVFDAGIRSGVYVFGEVITGGGTGNGDYDQFLAPYLQSTPHAAYDFPLFNAVRNAFAIGASMQQLVDPAASGQALPGNRA
VTFAVTHDIPNNAGFRYAILDPVDETLAYAYLIGRNGGMPMLYTDNNESGDNRWVNAYLRDDLRRMIGFHNGVQGTDMQV
LSSSSCHILFRRGSLGIVGINKCGNPVTTTVGMNNSVLYWNADYVDALGSGNVVRISSSSYTFTLPARGARMWRR

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI56549664, Length=315, Percent_Identity=29.5238095238095, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI56549662, Length=315, Percent_Identity=29.5238095238095, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI40254482, Length=315, Percent_Identity=29.5238095238095, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI56549660, Length=315, Percent_Identity=29.5238095238095, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI10280622, Length=445, Percent_Identity=26.7415730337079, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4502085, Length=315, Percent_Identity=29.5238095238095, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24654362, Length=451, Percent_Identity=27.9379157427938, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI18859631, Length=451, Percent_Identity=27.7161862527716, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI17137384, Length=428, Percent_Identity=25.7009345794392, Blast_Score=108, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006046
- InterPro:   IPR006047
- InterPro:   IPR006589
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase [H]

EC number: =3.2.1.1 [H]

Molecular weight: Translated: 51749; Mature: 51749

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTPAHAPPSLIQCGVRLLLTALVLLVTTANAQADVILHAFNWPYATVEARAKQIADAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
YRKVLVAPAYRSEGSAWWARYQPQDIRLIDNPLGDTAAFKKMVQALASNGVETYADIVFN
CEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
HMANEAATRSDLNYPGGAVLSQYAANPGRYDSLRLFGTLQSNFLSASDFGPAQCISNYND
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHCCCCC
AYQVRNYRICGGGSDPGLPDLLGNDWVVQQQRAYLQALKSMGVTGFRVDAAKHMTFDHLN
CEEECEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHCCHHHHH
RVFDAGIRSGVYVFGEVITGGGTGNGDYDQFLAPYLQSTPHAAYDFPLFNAVRNAFAIGA
HHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
SMQQLVDPAASGQALPGNRAVTFAVTHDIPNNAGFRYAILDPVDETLAYAYLIGRNGGMP
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHEEEEEEECCCCCE
MLYTDNNESGDNRWVNAYLRDDLRRMIGFHNGVQGTDMQVLSSSSCHILFRRGSLGIVGI
EEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCEEEEECCCEEEEEE
NKCGNPVTTTVGMNNSVLYWNADYVDALGSGNVVRISSSSYTFTLPARGARMWRR
CCCCCCEEEEECCCCCEEEECCHHHHHCCCCCEEEEECCCEEEEECCCCHHHCCC
>Mature Secondary Structure
MRNTPAHAPPSLIQCGVRLLLTALVLLVTTANAQADVILHAFNWPYATVEARAKQIADAG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCC
YRKVLVAPAYRSEGSAWWARYQPQDIRLIDNPLGDTAAFKKMVQALASNGVETYADIVFN
CEEEEEECCCCCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHH
HMANEAATRSDLNYPGGAVLSQYAANPGRYDSLRLFGTLQSNFLSASDFGPAQCISNYND
HHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEHHHHCCCCCCCCHHHHHCCCCC
AYQVRNYRICGGGSDPGLPDLLGNDWVVQQQRAYLQALKSMGVTGFRVDAAKHMTFDHLN
CEEECEEEEECCCCCCCCCHHCCCCCCHHHHHHHHHHHHHCCCCEEEECHHHHCCHHHHH
RVFDAGIRSGVYVFGEVITGGGTGNGDYDQFLAPYLQSTPHAAYDFPLFNAVRNAFAIGA
HHHHHHHHCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
SMQQLVDPAASGQALPGNRAVTFAVTHDIPNNAGFRYAILDPVDETLAYAYLIGRNGGMP
HHHHHHCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEEECCHHHHHEEEEEEECCCCCE
MLYTDNNESGDNRWVNAYLRDDLRRMIGFHNGVQGTDMQVLSSSSCHILFRRGSLGIVGI
EEEECCCCCCCCCEEHHHHHHHHHHHHHHCCCCCCCCHHEECCCCCEEEEECCCEEEEEE
NKCGNPVTTTVGMNNSVLYWNADYVDALGSGNVVRISSSSYTFTLPARGARMWRR
CCCCCCEEEEECCCCCEEEECCHHHHHCCCCCEEEEECCCEEEEECCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2449422 [H]