| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is 21241560
Identifier: 21241560
GI number: 21241560
Start: 938250
End: 938879
Strand: Reverse
Name: 21241560
Synonym: XAC0790
Alternate gene names: NA
Gene position: 938879-938250 (Counterclockwise)
Preceding gene: 21241561
Following gene: 21241556
Centisome position: 18.14
GC content: 68.57
Gene sequence:
>630_bases ATGTATGTCGCCAGCTCACACGCGCCCGGCTACGCTGCGCCGATGCATCGCCTTCTGCCCCTGTTGTTCTTGCTCTGCGC CTGTACCGCCGCGCGCGTGCAGGCGCAGGAAATCCATCGCTGCGTCGCGCCGGACGGGCAAACCCTGTTCACCGACCGGC GCTGCGAAGACGTCGGCGCGGCCAGCCGCGCACCGCCTGCCATCCGCCCGCAGGGCAATACCGGCCTGTATCGCTACGGT TGCCCGCGGCGGCTGAGCGAACTGGTGTCGTTGCTGCAACTGGCGGTCGACAGCCGCGACGTCAACCGCCTGTCCAGCCT GTATCTGTGGAGCGGGCAATCCGATGCCGCCGCCAATCAGGTGCTCAGCCGCCTGGAAGCCATCGTGCAGCGCCCGTTGC TGGACATCGTGCCGATGTATCCGCAAAGCGACACCCCGACCTGGGACGCCGACACCACCACGCCCACACCGTCGCTGGAT GGCAGCGCCATCGATGCGCCGCTCCCTACTCCGCCCAGCCGCCCGCGCCCCTGGGGACTGCGGCTGGAACAGAACCTCGC CAGTGGCACGCCGGCGCGCAGCGTGCTGCGGCTACGCCGGCAATACAACTGCTTCTGGGTGACGTTCTAG
Upstream 100 bases:
>100_bases CACCCTCAATCTGGCCAAGCCGACCACGCAGGTGTTGCAGCTGCTCGGACGCTGAGCACCTGCTTCGCATTCCAGTCCTC GCTCTCGCACACCCGCGCGC
Downstream 100 bases:
>100_bases CGGCGTATGCGTGGCATCGGGGCTGCGTGGGATCACCGCTGGATCGCTGTACGCCGCGGCAGGTATCGCGGGCATTGTGC GGGCGGTTCGGCCGTCAGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 209; Mature: 209
Protein sequence:
>209_residues MYVASSHAPGYAAPMHRLLPLLFLLCACTAARVQAQEIHRCVAPDGQTLFTDRRCEDVGAASRAPPAIRPQGNTGLYRYG CPRRLSELVSLLQLAVDSRDVNRLSSLYLWSGQSDAAANQVLSRLEAIVQRPLLDIVPMYPQSDTPTWDADTTTPTPSLD GSAIDAPLPTPPSRPRPWGLRLEQNLASGTPARSVLRLRRQYNCFWVTF
Sequences:
>Translated_209_residues MYVASSHAPGYAAPMHRLLPLLFLLCACTAARVQAQEIHRCVAPDGQTLFTDRRCEDVGAASRAPPAIRPQGNTGLYRYG CPRRLSELVSLLQLAVDSRDVNRLSSLYLWSGQSDAAANQVLSRLEAIVQRPLLDIVPMYPQSDTPTWDADTTTPTPSLD GSAIDAPLPTPPSRPRPWGLRLEQNLASGTPARSVLRLRRQYNCFWVTF >Mature_209_residues MYVASSHAPGYAAPMHRLLPLLFLLCACTAARVQAQEIHRCVAPDGQTLFTDRRCEDVGAASRAPPAIRPQGNTGLYRYG CPRRLSELVSLLQLAVDSRDVNRLSSLYLWSGQSDAAANQVLSRLEAIVQRPLLDIVPMYPQSDTPTWDADTTTPTPSLD GSAIDAPLPTPPSRPRPWGLRLEQNLASGTPARSVLRLRRQYNCFWVTF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23055; Mature: 23055
Theoretical pI: Translated: 8.59; Mature: 8.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYVASSHAPGYAAPMHRLLPLLFLLCACTAARVQAQEIHRCVAPDGQTLFTDRRCEDVGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCC ASRAPPAIRPQGNTGLYRYGCPRRLSELVSLLQLAVDSRDVNRLSSLYLWSGQSDAAANQ CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHH VLSRLEAIVQRPLLDIVPMYPQSDTPTWDADTTTPTPSLDGSAIDAPLPTPPSRPRPWGL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RLEQNLASGTPARSVLRLRRQYNCFWVTF CHHHHHCCCCCHHHHHHHHHHCCEEEEEC >Mature Secondary Structure MYVASSHAPGYAAPMHRLLPLLFLLCACTAARVQAQEIHRCVAPDGQTLFTDRRCEDVGA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHHCCC ASRAPPAIRPQGNTGLYRYGCPRRLSELVSLLQLAVDSRDVNRLSSLYLWSGQSDAAANQ CCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHHHCHHHHHHHHHHHEECCCCHHHHHH VLSRLEAIVQRPLLDIVPMYPQSDTPTWDADTTTPTPSLDGSAIDAPLPTPPSRPRPWGL HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RLEQNLASGTPARSVLRLRRQYNCFWVTF CHHHHHCCCCCHHHHHHHHHHCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA