| Definition | Xanthomonas axonopodis pv. citri str. 306 chromosome, complete genome. |
|---|---|
| Accession | NC_003919 |
| Length | 5,175,554 |
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The map label for this gene is frmR [H]
Identifier: 21241504
GI number: 21241504
Start: 873797
End: 874072
Strand: Direct
Name: frmR [H]
Synonym: XAC0733
Alternate gene names: 21241504
Gene position: 873797-874072 (Clockwise)
Preceding gene: 21241503
Following gene: 21241505
Centisome position: 16.88
GC content: 67.75
Gene sequence:
>276_bases ATGCCGCATTCGCCGCACGAGAAAAAGCGAGCGCTGGCGCGCGTGCGCCGGTTGCGCGGGCAATGCGACGCGCTGGAGCG GGCGCTGCAGGCGGGCGCAGACTGCGCTCCGGTCTTGCAGCAGATCGCCGCGATTCGGGGTGCCGTGAACGGGCTGATGT CGCAGGTGCTTGAAGCGCATATCCGCGAAGATTTCGGGCACGCCGCCGCATCCGATGCGCAACGCGCCGAGCGGGTGCAG GACCTGCTCGGTCTGGTCCGGTCCTACCTCAAATAA
Upstream 100 bases:
>100_bases CGGTGATCGCGCTCAACAAGACGACCGTCAGCAGGCCGCTGGGCATAGCTTTTTTCGAAACAATCCATATACTGCCCCCC AGTATTTCGCTGGAGCCGTC
Downstream 100 bases:
>100_bases AACTCCCACCGGGTCGGCGCTGGCCGCGCTCCCGTCCTCGAACCTCATCGTCAGGAGCGTCATCCCATGAAATCCCGTGC AGCAGTCGCATTTGGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MPHSPHEKKRALARVRRLRGQCDALERALQAGADCAPVLQQIAAIRGAVNGLMSQVLEAHIREDFGHAAASDAQRAERVQ DLLGLVRSYLK
Sequences:
>Translated_91_residues MPHSPHEKKRALARVRRLRGQCDALERALQAGADCAPVLQQIAAIRGAVNGLMSQVLEAHIREDFGHAAASDAQRAERVQ DLLGLVRSYLK >Mature_90_residues PHSPHEKKRALARVRRLRGQCDALERALQAGADCAPVLQQIAAIRGAVNGLMSQVLEAHIREDFGHAAASDAQRAERVQD LLGLVRSYLK
Specific function: Repressor of the frmRAB operon [H]
COG id: COG1937
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the frmR/rcnR family [H]
Homologues:
Organism=Escherichia coli, GI87081725, Length=91, Percent_Identity=56.043956043956, Blast_Score=109, Evalue=3e-26, Organism=Escherichia coli, GI1788422, Length=91, Percent_Identity=41.7582417582418, Blast_Score=72, Evalue=9e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003735 [H]
Pfam domain/function: PF02583 DUF156 [H]
EC number: NA
Molecular weight: Translated: 9979; Mature: 9847
Theoretical pI: Translated: 10.12; Mature: 10.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHSPHEKKRALARVRRLRGQCDALERALQAGADCAPVLQQIAAIRGAVNGLMSQVLEAH CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREDFGHAAASDAQRAERVQDLLGLVRSYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PHSPHEKKRALARVRRLRGQCDALERALQAGADCAPVLQQIAAIRGAVNGLMSQVLEAH CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH IREDFGHAAASDAQRAERVQDLLGLVRSYLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA