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The map label for this gene is cycA [H]

Identifier: 21241495

GI number: 21241495

Start: 863545

End: 864285

Strand: Reverse

Name: cycA [H]

Synonym: XAC0724

Alternate gene names: 21241495

Gene position: 864285-863545 (Counterclockwise)

Preceding gene: 21241497

Following gene: 21241494

Centisome position: 16.7

GC content: 69.37

Gene sequence:

>741_bases
GTGGCGTTTGCGCAATCGGCAGTCACGCCGATCCCCGATCCGCCGCCGGTGCGCGTTGCGCCGCTGGAGGTGGACCTGGC
CAAGACCACCTGGGGAGATGCCAAGGCCGGCCAGACCAAGGCGGCTGCCTGCGCAGCCTGCCATGGGCCGGACGGCAATC
CGGCAGTGGCGATGTACCCGCGCATTGCCGGGCAAACCGAGCGCTACGTCGCGCATCAGGTGGCGCTGATTGCCAGCGGC
GAGCGTAATACCGGCATGTCGGCGGTGATGGTGCCCTTCGTCAAGGACCTCACCGCCCAGGACATGCGCGATCTGGGCGC
CTATTTCGCCACCCAGAAGGCCTCTGCCGGTGTCGCCGACGACGCGGCGATCGCCGAGGGCCCCTACCAGGGCATGAAGT
TCTACGAGGTCGGCGAAAAGCTCTACCGCGGCGGCGACATCGCCCGCGGTGTGCCGGCCTGCATGGCCTGCCATGGGCCG
TCCGGCAGCGGCAATCCGGGCCCGGCCTATCCGCGCCTGGGCGGACAGCACGCCGAGTACGTGGCGCGGCGCCTGAAGGA
ATACCAGGCCGGCACCACCCAGGAGCGCAATCCAGCGCTGTTCAATATCATGGCGCAGGTGGCGCATCCGCTGACCGAGC
AGGAGATCCAGGCGCTGGCCAGCTACCTGCAAGGCCTGCATGATCGTGCCGACGACGCGGCAGCGGCGCAGCCGCCTGCA
GGAGCGCCCGCACGTTCGTGA

Upstream 100 bases:

>100_bases
GTACCCAACGCGCGCGGGCCGGGTCCATACGGAGCTTTAGCTGATGCGCCATGCTCGTGTGCTAGTCCTCGCCGCCCTCG
CCGTCCCGGTCATTGCGGCC

Downstream 100 bases:

>100_bases
GCTGATCCCTGCCGTCGCCACACCGCTTCACGACGCCGGTCCCGCGACCGGCGTCGTCGTTTACCGCTCGCCCCTCGCCC
CCACGGAGCCCGCATGAAAT

Product: cytochrome C4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYPRIAGQTERYVAHQVALIASG
ERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGP
SGSGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALASYLQGLHDRADDAAAAQPPA
GAPARS

Sequences:

>Translated_246_residues
MAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYPRIAGQTERYVAHQVALIASG
ERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGP
SGSGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALASYLQGLHDRADDAAAAQPPA
GAPARS
>Mature_245_residues
AFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYPRIAGQTERYVAHQVALIASGE
RNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVADDAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGPS
GSGNPGPAYPRLGGQHAEYVARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALASYLQGLHDRADDAAAAQPPAG
APARS

Specific function: Diheme, high potential cytochrome c believed to be an intermediate electron donor to terminal oxidation systems [H]

COG id: COG2863

COG function: function code C; Cytochrome c553

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009056
- InterPro:   IPR003088 [H]

Pfam domain/function: PF00034 Cytochrom_C [H]

EC number: NA

Molecular weight: Translated: 25701; Mature: 25570

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS51007 CYTC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYP
CCCCCCCCCCCCCCCCCEEECEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC
RIAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVAD
CCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGPSGSGNPGPAYPRLGGQHAEY
CHHHCCCCHHCCHHHHHHHHHHCCCCHHCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHH
VARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALASYLQGLHDRADDAAAAQPPA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCC
GAPARS
CCCCCC
>Mature Secondary Structure 
AFAQSAVTPIPDPPPVRVAPLEVDLAKTTWGDAKAGQTKAAACAACHGPDGNPAVAMYP
CCCCCCCCCCCCCCCCEEECEEEEECCCCCCCCCCCCHHHHHHHHCCCCCCCCEEEECC
RIAGQTERYVAHQVALIASGERNTGMSAVMVPFVKDLTAQDMRDLGAYFATQKASAGVAD
CCCCCHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
DAAIAEGPYQGMKFYEVGEKLYRGGDIARGVPACMACHGPSGSGNPGPAYPRLGGQHAEY
CHHHCCCCHHCCHHHHHHHHHHCCCCHHCCCHHHHEECCCCCCCCCCCCCCCCCCHHHHH
VARRLKEYQAGTTQERNPALFNIMAQVAHPLTEQEIQALASYLQGLHDRADDAAAAQPPA
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCC
GAPARS
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8026750; 9032080 [H]