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The map label for this gene is bphB [H]

Identifier: 21241454

GI number: 21241454

Start: 808727

End: 810586

Strand: Direct

Name: bphB [H]

Synonym: XAC0683

Alternate gene names: 21241454

Gene position: 808727-810586 (Clockwise)

Preceding gene: 21241453

Following gene: 21241455

Centisome position: 15.63

GC content: 63.06

Gene sequence:

>1860_bases
ATGCCGATCAGTCTTAGGCCCCCTGCAGCGAGCGAATTCGGTCCAGCAATGCAAACAACGGTCCAAGCAGACAAATGGGA
TCGCTGGCGCCTGCCTCTATTGGCGGTTGCCGTGTTCCTGATTGTGGTGGTGCCCTCGTTGTTGCTGCAGCAGATGGCCC
GCAACGCCAACCAGGCCGCGACCTGGGTCTCGCATAGCCAGCAAGTGCTGGAAAACGCGCAACGCTTGGAAGCGGCGATG
CGCAACGCCGAATCGGCAGCGCTGATGCGCTCGCACGGGGTCGAGCGCCCGGCGCTGCTGGAACGGATGCGGCGTGGGCG
TAGCGAGGCCCAGGCCGCGGTGCAGCGGCTGATTTTTCTGACCAAAGACAACCCCGCCCAGCAAGTACGCATGGGGCGCA
TCCAAAGCACCATCGAACGGCGTCTGCTATTGGCCGAGCGCATTGCGGTGACTACCGCGCCGGAGCAAATCCGCGCGCTG
ATCAACGACATGACCCTGAACAACCCGATCCGTGTGCTGATCGATGACCTGCAAAGCGCCGAGGGACGCTTACTTGACCT
GCGCAATGCGCGCGCCGAAACCGAGCGCATGCATTACGCGGTGTTGAGCTGGGCGGCGCTGGCGGTGCAGTTGCTGTTGC
TGGGCACGGTGACCTGGCTGCTGCAGCGGCAGATCCGCCGCCGGTTGGCGGCCGAGCAGGAATACCTGCGCGCCAATGGC
CGCGCCAGCTCGGTGCTGCAAACCGTGCGCGAGCCGATCGTGCTGCTGGATGCCAGCCAGCGCATCGTGTTGCATAACCC
TGCCTTCGCCGACCTGTATGGCCTGGAAGAGCGCGGCAACGAATTGATGGCGCTGGAAGATGTGGGCGGGGGCGTCTGGC
GCGATGCGCAGATCCACCAGCGTCTGGCGGACGTGTTGTTGCGTGGACGCGAGTTGTGGGATTACGAACACGAGCAGCGC
GCCGCCGACGGCGTGCTGCGCACCATGTTGATCAATGCACGCCGCATGCCGCTGCCCGACACCGCCGACGAAGACGTGGT
GCTGATGACGGTGAGCGACATCAGCCTGCAGAAGACCGCGCAGTTGCGCATCCATGAGCTCAACCGGCAGATGGAGGGCA
AAGTGGAGCAGGTCTCGGAAGTCAACCGCGAGTTGGAAGCCTTCAGCTATTCGGTCTCGCACGATCTGCGCGCACCGTTG
CGGCATGTGGCCGGATTCTCCGACAAGCTGGCGCGTCATCTGGGCGATACGGCCGACGAGAAGTCGCGCCATTACATGGA
AGTGATCAGCAGCTCGGCGCGGCGCATGGCCTCGCTGATCGACGATCTGCTGGTGTATTCGCGCCTGGGCCGCGGTGCGC
TGCGCCTGCAAGCGGTGGACATGCAATCGCTGGTGGCCGAAACGCGTGCGATTCTGGATTCCAACGTGCAGAGCGAGAAC
ACCGGCCACCGGGTGGAATGGCATATCGCACCACTGCCGGTGCTGGTTGCCGACGAAAACATGATGCGCCAGCTGTGGAT
GAACCTGCTTGGCAATGCAGTCAAGTACAGCGCCAAGCGTGAGGTGGCCAAAATCGAGGTCAGCTACACGCCGATGTCCG
ACGGCGGCCACCAGTTCAGCGTGCGCGACAATGGTGCCGGTTTCGATATGGAATACAGCGGAAAATTGTTCGGCGTGTTC
CAACGTTTGCATAAGGCCAGCGAATACGCTGGGACCGGCATCGGCCTGGCCAGCGTGCGGCGGGTGTTGACCCGTCACGG
CGGCCGGATATGGGCCGAAGGCGCCGTCGACGAAGGCGCCACGTTTTATTTCGTGTTACCTCCTGCGCTTGAAGCGCCCA
ACCAAGAGTTCACTGCATGA

Upstream 100 bases:

>100_bases
TTTCACGCATGCTATACGTATGCTATGCCCATTCAGCTATGTCACAGACGGACATGATTTCTCTGAATCATTAATCTGGC
AAGCTGCGTGATCGGAGACA

Downstream 100 bases:

>100_bases
CCGCCATCCGTACCATTCTTCTGGCAGAAGACAGCCCGGCCGATGCGGAGATGGCGGTCGACGCCTTGCGCGAAGCCCGC
CTTGCCAATCCCATCGTGCA

Product: two-component system sensor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 619; Mature: 618

Protein sequence:

>619_residues
MPISLRPPAASEFGPAMQTTVQADKWDRWRLPLLAVAVFLIVVVPSLLLQQMARNANQAATWVSHSQQVLENAQRLEAAM
RNAESAALMRSHGVERPALLERMRRGRSEAQAAVQRLIFLTKDNPAQQVRMGRIQSTIERRLLLAERIAVTTAPEQIRAL
INDMTLNNPIRVLIDDLQSAEGRLLDLRNARAETERMHYAVLSWAALAVQLLLLGTVTWLLQRQIRRRLAAEQEYLRANG
RASSVLQTVREPIVLLDASQRIVLHNPAFADLYGLEERGNELMALEDVGGGVWRDAQIHQRLADVLLRGRELWDYEHEQR
AADGVLRTMLINARRMPLPDTADEDVVLMTVSDISLQKTAQLRIHELNRQMEGKVEQVSEVNRELEAFSYSVSHDLRAPL
RHVAGFSDKLARHLGDTADEKSRHYMEVISSSARRMASLIDDLLVYSRLGRGALRLQAVDMQSLVAETRAILDSNVQSEN
TGHRVEWHIAPLPVLVADENMMRQLWMNLLGNAVKYSAKREVAKIEVSYTPMSDGGHQFSVRDNGAGFDMEYSGKLFGVF
QRLHKASEYAGTGIGLASVRRVLTRHGGRIWAEGAVDEGATFYFVLPPALEAPNQEFTA

Sequences:

>Translated_619_residues
MPISLRPPAASEFGPAMQTTVQADKWDRWRLPLLAVAVFLIVVVPSLLLQQMARNANQAATWVSHSQQVLENAQRLEAAM
RNAESAALMRSHGVERPALLERMRRGRSEAQAAVQRLIFLTKDNPAQQVRMGRIQSTIERRLLLAERIAVTTAPEQIRAL
INDMTLNNPIRVLIDDLQSAEGRLLDLRNARAETERMHYAVLSWAALAVQLLLLGTVTWLLQRQIRRRLAAEQEYLRANG
RASSVLQTVREPIVLLDASQRIVLHNPAFADLYGLEERGNELMALEDVGGGVWRDAQIHQRLADVLLRGRELWDYEHEQR
AADGVLRTMLINARRMPLPDTADEDVVLMTVSDISLQKTAQLRIHELNRQMEGKVEQVSEVNRELEAFSYSVSHDLRAPL
RHVAGFSDKLARHLGDTADEKSRHYMEVISSSARRMASLIDDLLVYSRLGRGALRLQAVDMQSLVAETRAILDSNVQSEN
TGHRVEWHIAPLPVLVADENMMRQLWMNLLGNAVKYSAKREVAKIEVSYTPMSDGGHQFSVRDNGAGFDMEYSGKLFGVF
QRLHKASEYAGTGIGLASVRRVLTRHGGRIWAEGAVDEGATFYFVLPPALEAPNQEFTA
>Mature_618_residues
PISLRPPAASEFGPAMQTTVQADKWDRWRLPLLAVAVFLIVVVPSLLLQQMARNANQAATWVSHSQQVLENAQRLEAAMR
NAESAALMRSHGVERPALLERMRRGRSEAQAAVQRLIFLTKDNPAQQVRMGRIQSTIERRLLLAERIAVTTAPEQIRALI
NDMTLNNPIRVLIDDLQSAEGRLLDLRNARAETERMHYAVLSWAALAVQLLLLGTVTWLLQRQIRRRLAAEQEYLRANGR
ASSVLQTVREPIVLLDASQRIVLHNPAFADLYGLEERGNELMALEDVGGGVWRDAQIHQRLADVLLRGRELWDYEHEQRA
ADGVLRTMLINARRMPLPDTADEDVVLMTVSDISLQKTAQLRIHELNRQMEGKVEQVSEVNRELEAFSYSVSHDLRAPLR
HVAGFSDKLARHLGDTADEKSRHYMEVISSSARRMASLIDDLLVYSRLGRGALRLQAVDMQSLVAETRAILDSNVQSENT
GHRVEWHIAPLPVLVADENMMRQLWMNLLGNAVKYSAKREVAKIEVSYTPMSDGGHQFSVRDNGAGFDMEYSGKLFGVFQ
RLHKASEYAGTGIGLASVRRVLTRHGGRIWAEGAVDEGATFYFVLPPALEAPNQEFTA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI48994928, Length=248, Percent_Identity=29.4354838709677, Blast_Score=92, Evalue=1e-19,
Organism=Escherichia coli, GI1788549, Length=373, Percent_Identity=25.201072386059, Blast_Score=89, Evalue=1e-18,
Organism=Escherichia coli, GI1786912, Length=249, Percent_Identity=28.1124497991968, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1789149, Length=246, Percent_Identity=27.2357723577236, Blast_Score=80, Evalue=5e-16,
Organism=Escherichia coli, GI1790346, Length=221, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1786600, Length=247, Percent_Identity=28.3400809716599, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1790436, Length=217, Percent_Identity=26.2672811059908, Blast_Score=73, Evalue=5e-14,
Organism=Escherichia coli, GI87081816, Length=250, Percent_Identity=28, Blast_Score=69, Evalue=7e-13,
Organism=Escherichia coli, GI1788713, Length=427, Percent_Identity=19.672131147541, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1790861, Length=277, Percent_Identity=25.6317689530686, Blast_Score=62, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 69543; Mature: 69412

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISLRPPAASEFGPAMQTTVQADKWDRWRLPLLAVAVFLIVVVPSLLLQQMARNANQAA
CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TWVSHSQQVLENAQRLEAAMRNAESAALMRSHGVERPALLERMRRGRSEAQAAVQRLIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHE
TKDNPAQQVRMGRIQSTIERRLLLAERIAVTTAPEQIRALINDMTLNNPIRVLIDDLQSA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
EGRLLDLRNARAETERMHYAVLSWAALAVQLLLLGTVTWLLQRQIRRRLAAEQEYLRANG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RASSVLQTVREPIVLLDASQRIVLHNPAFADLYGLEERGNELMALEDVGGGVWRDAQIHQ
CHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHCHHHCCCCEEEEECCCCCCCCHHHHHH
RLADVLLRGRELWDYEHEQRAADGVLRTMLINARRMPLPDTADEDVVLMTVSDISLQKTA
HHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHH
QLRIHELNRQMEGKVEQVSEVNRELEAFSYSVSHDLRAPLRHVAGFSDKLARHLGDTADE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH
KSRHYMEVISSSARRMASLIDDLLVYSRLGRGALRLQAVDMQSLVAETRAILDSNVQSEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
TGHRVEWHIAPLPVLVADENMMRQLWMNLLGNAVKYSAKREVAKIEVSYTPMSDGGHQFS
CCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEE
VRDNGAGFDMEYSGKLFGVFQRLHKASEYAGTGIGLASVRRVLTRHGGRIWAEGAVDEGA
EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC
TFYFVLPPALEAPNQEFTA
EEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
PISLRPPAASEFGPAMQTTVQADKWDRWRLPLLAVAVFLIVVVPSLLLQQMARNANQAA
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
TWVSHSQQVLENAQRLEAAMRNAESAALMRSHGVERPALLERMRRGRSEAQAAVQRLIFL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHHHHHHHHHE
TKDNPAQQVRMGRIQSTIERRLLLAERIAVTTAPEQIRALINDMTLNNPIRVLIDDLQSA
ECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCC
EGRLLDLRNARAETERMHYAVLSWAALAVQLLLLGTVTWLLQRQIRRRLAAEQEYLRANG
CCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
RASSVLQTVREPIVLLDASQRIVLHNPAFADLYGLEERGNELMALEDVGGGVWRDAQIHQ
CHHHHHHHHHCCEEEEECCCEEEEECCCHHHHHCHHHCCCCEEEEECCCCCCCCHHHHHH
RLADVLLRGRELWDYEHEQRAADGVLRTMLINARRMPLPDTADEDVVLMTVSDISLQKTA
HHHHHHHHCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHH
QLRIHELNRQMEGKVEQVSEVNRELEAFSYSVSHDLRAPLRHVAGFSDKLARHLGDTADE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHH
KSRHYMEVISSSARRMASLIDDLLVYSRLGRGALRLQAVDMQSLVAETRAILDSNVQSEN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCCCCCCC
TGHRVEWHIAPLPVLVADENMMRQLWMNLLGNAVKYSAKREVAKIEVSYTPMSDGGHQFS
CCCEEEEEECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCEEEEEEEECCCCCCCCEEE
VRDNGAGFDMEYSGKLFGVFQRLHKASEYAGTGIGLASVRRVLTRHGGRIWAEGAVDEGA
EECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEECCCCCCCC
TFYFVLPPALEAPNQEFTA
EEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]